RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 ILDR2Q71H61 639 aa17.86■□□□□ 0.45
CAPN1-210ENST00000527699 MAPKBP1O60336 1514 aa17.82■□□□□ 0.44
CAPN1-210ENST00000527699 GRIN2AQ12879 1464 aa17.82■□□□□ 0.44
CAPN1-210ENST00000527699 DISP3Q9P2K9 1392 aa17.82■□□□□ 0.44
CAPN1-210ENST00000527699 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
CAPN1-210ENST00000527699 PRG4Q92954 1404 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-210ENST00000527699 NUP160Q12769 1436 aa17.75■□□□□ 0.43
CAPN1-210ENST00000527699 ABCA10Q8WWZ4 1543 aa17.75■□□□□ 0.43
CAPN1-210ENST00000527699 ABCA5Q8WWZ7 1642 aa17.73■□□□□ 0.43
CAPN1-210ENST00000527699 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
CAPN1-210ENST00000527699 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
CAPN1-210ENST00000527699 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
CAPN1-210ENST00000527699 JPH4Q96JJ6 628 aa17.65■□□□□ 0.42
CAPN1-210ENST00000527699 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
CAPN1-210ENST00000527699 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
CAPN1-210ENST00000527699 PPRC1Q5VV67 1664 aaKnown RBP17.58■□□□□ 0.41
CAPN1-210ENST00000527699 FHAD1B1AJZ9 1412 aa17.57■□□□□ 0.4
CAPN1-210ENST00000527699 COL17A1Q9UMD9 1497 aaPredicted RBP17.55■□□□□ 0.4
CAPN1-210ENST00000527699 TTBK1Q5TCY1 1321 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-210ENST00000527699 SPATA31D1Q6ZQQ2 1576 aa17.5■□□□□ 0.39
CAPN1-210ENST00000527699 ERICH3Q5RHP9 1530 aa17.5■□□□□ 0.39
CAPN1-210ENST00000527699 CERKQ8TCT0 537 aa17.46■□□□□ 0.39
CAPN1-210ENST00000527699 GLI2P10070 1586 aa17.45■□□□□ 0.38
CAPN1-210ENST00000527699 ASXL2Q76L83 1435 aa17.45■□□□□ 0.38
CAPN1-210ENST00000527699 TEX14Q8IWB6 1497 aa17.44■□□□□ 0.38
CAPN1-210ENST00000527699 RUSC2Q8N2Y8 1516 aa17.43■□□□□ 0.38
CAPN1-210ENST00000527699 PLB1Q6P1J6 1458 aa17.43■□□□□ 0.38
CAPN1-210ENST00000527699 KIF21BO75037 1637 aa17.39■□□□□ 0.37
CAPN1-210ENST00000527699 PCF11O94913 1555 aaKnown RBP17.36■□□□□ 0.37
CAPN1-210ENST00000527699 ABCC2Q92887 1545 aa17.36■□□□□ 0.37
CAPN1-210ENST00000527699 CUL7Q14999 1698 aa17.36■□□□□ 0.37
CAPN1-210ENST00000527699 PTPRMP28827 1452 aa17.35■□□□□ 0.37
CAPN1-210ENST00000527699 MAP3K4Q9Y6R4 1608 aa17.35■□□□□ 0.37
CAPN1-210ENST00000527699 IGF1RP08069 1367 aa17.34■□□□□ 0.37
CAPN1-210ENST00000527699 PTPRGP23470 1445 aa17.34■□□□□ 0.37
CAPN1-210ENST00000527699 EPRSP07814 1512 aaKnown RBP17.31■□□□□ 0.36
CAPN1-210ENST00000527699 KIF27Q86VH2 1401 aa17.3■□□□□ 0.36
CAPN1-210ENST00000527699 HSPA2P54652 639 aa17.29■□□□□ 0.36
CAPN1-210ENST00000527699 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
CAPN1-210ENST00000527699 CARMIL1Q5VZK9 1371 aa17.24■□□□□ 0.35
CAPN1-210ENST00000527699 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
CAPN1-210ENST00000527699 ADAMTSL3P82987 1691 aa17.23■□□□□ 0.35
CAPN1-210ENST00000527699 TNIKQ9UKE5 1360 aa17.19■□□□□ 0.34
CAPN1-210ENST00000527699 ARID4BQ4LE39 1312 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-210ENST00000527699 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
CAPN1-210ENST00000527699 MADDQ8WXG6 1647 aa17.16■□□□□ 0.34
CAPN1-210ENST00000527699 UACAQ9BZF9 1416 aa17.14■□□□□ 0.33
CAPN1-210ENST00000527699 UHRF1BP1LA0JNW5 1464 aa17.14■□□□□ 0.33
CAPN1-210ENST00000527699 ZCCHC11Q5TAX3 1644 aaKnown RBP17.13■□□□□ 0.33
CAPN1-210ENST00000527699 CD109Q6YHK3 1445 aa17.13■□□□□ 0.33
CAPN1-210ENST00000527699 RIMS1Q86UR5 1692 aaKnown RBP17.11■□□□□ 0.33
CAPN1-210ENST00000527699 BCORL1Q5H9F3 1711 aa17.1■□□□□ 0.33
CAPN1-210ENST00000527699 IQGAP2Q13576 1575 aa17.1■□□□□ 0.33
CAPN1-210ENST00000527699 KDM5BQ9UGL1 1544 aa17.09■□□□□ 0.33
CAPN1-210ENST00000527699 MAGI3Q5TCQ9 1506 aa17.08■□□□□ 0.32
CAPN1-210ENST00000527699 KCNH8Q96L42 1107 aa17.08■□□□□ 0.32
CAPN1-210ENST00000527699 WDR7Q9Y4E6 1490 aa17.07■□□□□ 0.32
CAPN1-210ENST00000527699 CFAP43Q8NDM7 1665 aa17.07■□□□□ 0.32
CAPN1-210ENST00000527699 DISP1Q96F81 1524 aa17.05■□□□□ 0.32
CAPN1-210ENST00000527699 RAPGEF2Q9Y4G8 1499 aa17.04■□□□□ 0.32
CAPN1-210ENST00000527699 ARAP3Q8WWN8 1544 aa16.97■□□□□ 0.31
CAPN1-210ENST00000527699 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
CAPN1-210ENST00000527699 ARID3CA6NKF2 412 aa16.96■□□□□ 0.31
CAPN1-210ENST00000527699 KIAA0556O60303 1618 aa16.96■□□□□ 0.3
CAPN1-210ENST00000527699 UGGT2Q9NYU1 1516 aa16.96■□□□□ 0.3
CAPN1-210ENST00000527699 RAPGEF3O95398 923 aa16.95■□□□□ 0.3
CAPN1-210ENST00000527699 P3H3Q8IVL6 736 aa16.93■□□□□ 0.3
CAPN1-210ENST00000527699 YEATS2Q9ULM3 1422 aa16.91■□□□□ 0.3
CAPN1-210ENST00000527699 CTTNBP2Q8WZ74 1663 aa16.88■□□□□ 0.29
CAPN1-210ENST00000527699 RANGAP1P46060 587 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-210ENST00000527699 MLECQ14165 292 aa16.86■□□□□ 0.29
CAPN1-210ENST00000527699 STRCQ7RTU9 1775 aa16.86■□□□□ 0.29
CAPN1-210ENST00000527699 POGZQ7Z3K3 1410 aa16.85■□□□□ 0.29
CAPN1-210ENST00000527699 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-210ENST00000527699 PREX1Q8TCU6 1659 aa16.84■□□□□ 0.29
CAPN1-210ENST00000527699 UBAP1LF5GYI3 381 aa16.83■□□□□ 0.28
CAPN1-210ENST00000527699 MED1Q15648 1581 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-210ENST00000527699 PHLDB1Q86UU1 1377 aa16.82■□□□□ 0.28
CAPN1-210ENST00000527699 FER1L4A9Z1Z3 1794 aa16.82■□□□□ 0.28
CAPN1-210ENST00000527699 GOLGA3Q08378 1498 aa16.81■□□□□ 0.28
CAPN1-210ENST00000527699 ABCA8O94911 1581 aa16.8■□□□□ 0.28
CAPN1-210ENST00000527699 ARHGEF40Q8TER5 1519 aa16.8■□□□□ 0.28
CAPN1-210ENST00000527699 FANCAO15360 1455 aa16.8■□□□□ 0.28
CAPN1-210ENST00000527699 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
CAPN1-210ENST00000527699 PRXQ9BXM0 1461 aa16.8■□□□□ 0.28
CAPN1-210ENST00000527699 FRMPD1Q5SYB0 1578 aa16.78■□□□□ 0.28
CAPN1-210ENST00000527699 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
CAPN1-210ENST00000527699 FAM9AQ8IZU1 332 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-210ENST00000527699 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
CAPN1-210ENST00000527699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-210ENST00000527699 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
CAPN1-210ENST00000527699 PTPRTO14522 1441 aa16.75■□□□□ 0.27
CAPN1-210ENST00000527699 TTC37Q6PGP7 1564 aa16.74■□□□□ 0.27
CAPN1-210ENST00000527699 CEBPAP49715 358 aaPredicted RBP16.74■□□□□ 0.27
CAPN1-210ENST00000527699 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
CAPN1-210ENST00000527699 UHRF1BP1Q6BDS2 1440 aa16.73■□□□□ 0.27
CAPN1-210ENST00000527699 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
CAPN1-210ENST00000527699 NEO1Q92859 1461 aa16.73■□□□□ 0.27
CAPN1-210ENST00000527699 AKNAQ7Z591 1439 aa16.72■□□□□ 0.27
CAPN1-210ENST00000527699 ATP10BO94823 1461 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms