RNA–Protein interactions for RNA: ENST00000527547.5

CDC27-204, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-204ENST00000527547 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
CDC27-204ENST00000527547 GRIN2AQ12879 1464 aa14.57□□□□□ -0.08
CDC27-204ENST00000527547 P3H3Q8IVL6 736 aa14.55□□□□□ -0.08
CDC27-204ENST00000527547 ARHGAP35Q9NRY4 1499 aa14.54□□□□□ -0.08
CDC27-204ENST00000527547 ARAP1Q96P48 1450 aa14.53□□□□□ -0.08
CDC27-204ENST00000527547 PPARGC1BQ86YN6 1023 aaKnown RBP14.52□□□□□ -0.08
CDC27-204ENST00000527547 CEP170Q5SW79 1584 aa14.51□□□□□ -0.09
CDC27-204ENST00000527547 CHD1O14646 1710 aa14.49□□□□□ -0.09
CDC27-204ENST00000527547 IQGAP2Q13576 1575 aa14.48□□□□□ -0.09
CDC27-204ENST00000527547 VPS8Q8N3P4 1428 aa14.47□□□□□ -0.09
CDC27-204ENST00000527547 FHOD3Q2V2M9 1422 aa14.46□□□□□ -0.09
CDC27-204ENST00000527547 KIAA0586Q9BVV6 1533 aa14.46□□□□□ -0.09
CDC27-204ENST00000527547 NUP160Q12769 1436 aa14.46□□□□□ -0.1
CDC27-204ENST00000527547 TTBK1Q5TCY1 1321 aaPredicted RBP14.44□□□□□ -0.1
CDC27-204ENST00000527547 EFCAB5A4FU69 1503 aa14.42□□□□□ -0.1
CDC27-204ENST00000527547 SAMD9Q5K651 1589 aa14.42□□□□□ -0.1
CDC27-204ENST00000527547 UGGT2Q9NYU1 1516 aa14.39□□□□□ -0.11
CDC27-204ENST00000527547 JPH4Q96JJ6 628 aa14.39□□□□□ -0.11
CDC27-204ENST00000527547 DISP1Q96F81 1524 aa14.37□□□□□ -0.11
CDC27-204ENST00000527547 ATP1B4Q9UN42 357 aaPredicted RBP14.37□□□□□ -0.11
CDC27-204ENST00000527547 KIAA0556O60303 1618 aa14.34□□□□□ -0.11
CDC27-204ENST00000527547 PCF11O94913 1555 aaKnown RBP14.34□□□□□ -0.11
CDC27-204ENST00000527547 APLP2Q06481 763 aa14.33□□□□□ -0.11
CDC27-204ENST00000527547 FMN1Q68DA7 1419 aa14.31□□□□□ -0.12
CDC27-204ENST00000527547 PRG4Q92954 1404 aaPredicted RBP14.31□□□□□ -0.12
CDC27-204ENST00000527547 KANK4Q5T7N3 995 aaPredicted RBP14.3□□□□□ -0.12
CDC27-204ENST00000527547 CLASP1Q7Z460 1538 aa14.29□□□□□ -0.12
CDC27-204ENST00000527547 PCGF6Q9BYE7 350 aa14.29□□□□□ -0.12
CDC27-204ENST00000527547 CARMIL2Q6F5E8 1435 aa14.28□□□□□ -0.12
CDC27-204ENST00000527547 CASKIN1Q8WXD9 1431 aa14.28□□□□□ -0.12
CDC27-204ENST00000527547 ARID3CA6NKF2 412 aa14.28□□□□□ -0.12
CDC27-204ENST00000527547 ERCC6L2Q5T890 1561 aa14.27□□□□□ -0.12
CDC27-204ENST00000527547 FYCO1Q9BQS8 1478 aa14.26□□□□□ -0.13
CDC27-204ENST00000527547 SHROOM2Q13796 1616 aa14.26□□□□□ -0.13
CDC27-204ENST00000527547 OSCARQ8IYS5 282 aa14.25□□□□□ -0.13
CDC27-204ENST00000527547 TRIM26Q12899 539 aaPredicted RBP14.25□□□□□ -0.13
CDC27-204ENST00000527547 LRRIQ1Q96JM4 1722 aa14.24□□□□□ -0.13
CDC27-204ENST00000527547 TIAM1Q13009 1591 aa14.23□□□□□ -0.13
CDC27-204ENST00000527547 PLB1Q6P1J6 1458 aa14.22□□□□□ -0.13
CDC27-204ENST00000527547 CFAP43Q8NDM7 1665 aa14.19□□□□□ -0.14
CDC27-204ENST00000527547 PTPRGP23470 1445 aa14.19□□□□□ -0.14
CDC27-204ENST00000527547 RAPGEF6Q8TEU7 1601 aa14.18□□□□□ -0.14
CDC27-204ENST00000527547 CDK13Q14004 1512 aaKnown RBP14.18□□□□□ -0.14
CDC27-204ENST00000527547 HECW1Q76N89 1606 aa14.18□□□□□ -0.14
CDC27-204ENST00000527547 LRRC9Q6ZRR7 1453 aa14.18□□□□□ -0.14
CDC27-204ENST00000527547 MAP3K1Q13233 1512 aa14.17□□□□□ -0.14
CDC27-204ENST00000527547 NUP153P49790 1475 aaKnown RBP14.17□□□□□ -0.14
CDC27-204ENST00000527547 EPRSP07814 1512 aaKnown RBP14.17□□□□□ -0.14
CDC27-204ENST00000527547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
CDC27-204ENST00000527547 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
CDC27-204ENST00000527547 ABCA8O94911 1581 aa14.13□□□□□ -0.15
CDC27-204ENST00000527547 MAGI3Q5TCQ9 1506 aa14.13□□□□□ -0.15
CDC27-204ENST00000527547 CCDC18Q5T9S5 1454 aa14.12□□□□□ -0.15
CDC27-204ENST00000527547 MTUS2Q5JR59 1369 aa14.12□□□□□ -0.15
CDC27-204ENST00000527547 UACAQ9BZF9 1416 aa14.09□□□□□ -0.15
CDC27-204ENST00000527547 PHLDB1Q86UU1 1377 aa14.08□□□□□ -0.16
CDC27-204ENST00000527547 ATP10BO94823 1461 aa14.07□□□□□ -0.16
CDC27-204ENST00000527547 EHBP1L1Q8N3D4 1523 aa14.05□□□□□ -0.16
CDC27-204ENST00000527547 ABCC2Q92887 1545 aa14.04□□□□□ -0.16
CDC27-204ENST00000527547 NCOA2Q15596 1464 aa14.03□□□□□ -0.16
CDC27-204ENST00000527547 CDK11AQ9UQ88 783 aaPredicted RBP14.02□□□□□ -0.17
CDC27-204ENST00000527547 ARHGEF11O15085 1522 aa14.02□□□□□ -0.17
CDC27-204ENST00000527547 SUPT6HQ7KZ85 1726 aaKnown RBP14.02□□□□□ -0.17
CDC27-204ENST00000527547 RRBP1Q9P2E9 1410 aaKnown RBP14□□□□□ -0.17
CDC27-204ENST00000527547 PLEKHD1A6NEE1 506 aa14□□□□□ -0.17
CDC27-204ENST00000527547 ADCY10Q96PN6 1610 aa14□□□□□ -0.17
CDC27-204ENST00000527547 TROQ12816 1431 aaPredicted RBP14□□□□□ -0.17
CDC27-204ENST00000527547 CCNB3Q8WWL7 1395 aa13.99□□□□□ -0.17
CDC27-204ENST00000527547 UHRF1BP1LA0JNW5 1464 aa13.98□□□□□ -0.17
CDC27-204ENST00000527547 KIF14Q15058 1648 aa13.98□□□□□ -0.17
CDC27-204ENST00000527547 ITGAEP38570 1179 aa13.98□□□□□ -0.17
CDC27-204ENST00000527547 FAM50AQ14320 339 aaKnown RBP13.98□□□□□ -0.17
CDC27-204ENST00000527547 ZCCHC11Q5TAX3 1644 aaKnown RBP13.97□□□□□ -0.17
CDC27-204ENST00000527547 RIMBP3CA6NJZ7 1639 aa13.96□□□□□ -0.17
CDC27-204ENST00000527547 RIMBP3BA6NNM3 1639 aa13.96□□□□□ -0.17
CDC27-204ENST00000527547 RIMBP3Q9UFD9 1639 aa13.96□□□□□ -0.17
CDC27-204ENST00000527547 MYOM3Q5VTT5 1437 aa13.96□□□□□ -0.18
CDC27-204ENST00000527547 KDM5BQ9UGL1 1544 aa13.96□□□□□ -0.18
CDC27-204ENST00000527547 FGD6Q6ZV73 1430 aa13.95□□□□□ -0.18
CDC27-204ENST00000527547 CYB5RLQ6IPT4 315 aa13.95□□□□□ -0.18
CDC27-204ENST00000527547 KCNH8Q96L42 1107 aa13.94□□□□□ -0.18
CDC27-204ENST00000527547 ZNF644Q9H582 1327 aaPredicted RBP13.89□□□□□ -0.19
CDC27-204ENST00000527547 PTPN23Q9H3S7 1636 aa13.89□□□□□ -0.19
CDC27-204ENST00000527547 ABCC10Q5T3U5 1492 aa13.88□□□□□ -0.19
CDC27-204ENST00000527547 GPATCH8Q9UKJ3 1502 aaKnown RBP13.88□□□□□ -0.19
CDC27-204ENST00000527547 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
CDC27-204ENST00000527547 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDC27-204ENST00000527547 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
CDC27-204ENST00000527547 TTC37Q6PGP7 1564 aa13.86□□□□□ -0.19
CDC27-204ENST00000527547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDC27-204ENST00000527547 ASXL2Q76L83 1435 aa13.85□□□□□ -0.19
CDC27-204ENST00000527547 MIA2Q96PC5 1412 aa13.85□□□□□ -0.19
CDC27-204ENST00000527547 CDC42BPAQ5VT25 1732 aa13.85□□□□□ -0.19
CDC27-204ENST00000527547 WDR7Q9Y4E6 1490 aa13.84□□□□□ -0.19
CDC27-204ENST00000527547 PTPRKQ15262 1439 aa13.84□□□□□ -0.19
CDC27-204ENST00000527547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.83□□□□□ -0.19
CDC27-204ENST00000527547 TCOF1Q13428 1488 aaKnown RBP13.83□□□□□ -0.19
CDC27-204ENST00000527547 ITSN2Q9NZM3 1697 aa13.82□□□□□ -0.2
CDC27-204ENST00000527547 CHIC2Q9UKJ5 165 aa13.81□□□□□ -0.2
CDC27-204ENST00000527547 CAMSAP2Q08AD1 1489 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms