RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 KIAA0586Q9BVV6 1533 aa28.58■■■□□ 2.17
NR1H3-229ENST00000527464 ERCC6L2Q5T890 1561 aa28.54■■■□□ 2.16
NR1H3-229ENST00000527464 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
NR1H3-229ENST00000527464 RAPGEF2Q9Y4G8 1499 aa28.5■■■□□ 2.15
NR1H3-229ENST00000527464 PRXQ9BXM0 1461 aa28.37■■■□□ 2.13
NR1H3-229ENST00000527464 IQGAP2Q13576 1575 aa28.37■■■□□ 2.13
NR1H3-229ENST00000527464 EEA1Q15075 1411 aa28.35■■■□□ 2.13
NR1H3-229ENST00000527464 CHIC1Q5VXU3 224 aa28.31■■■□□ 2.12
NR1H3-229ENST00000527464 CSRNP3Q8WYN3 585 aa28.31■■■□□ 2.12
NR1H3-229ENST00000527464 CARMIL2Q6F5E8 1435 aa28.29■■■□□ 2.12
NR1H3-229ENST00000527464 UGGT2Q9NYU1 1516 aa28.23■■■□□ 2.11
NR1H3-229ENST00000527464 CTTNBP2Q8WZ74 1663 aa28.22■■■□□ 2.11
NR1H3-229ENST00000527464 TRHP20396 242 aaPredicted RBP28.2■■■□□ 2.1
NR1H3-229ENST00000527464 TNIKQ9UKE5 1360 aa28.19■■■□□ 2.1
NR1H3-229ENST00000527464 PTPRGP23470 1445 aa28.18■■■□□ 2.1
NR1H3-229ENST00000527464 DISP1Q96F81 1524 aa28.17■■■□□ 2.1
NR1H3-229ENST00000527464 NPM1P06748 294 aaKnown RBP eCLIP28.09■■■□□ 2.09
NR1H3-229ENST00000527464 ADCY10Q96PN6 1610 aa28.09■■■□□ 2.09
NR1H3-229ENST00000527464 GOLGA3Q08378 1498 aa28.08■■■□□ 2.09
NR1H3-229ENST00000527464 KIAA0556O60303 1618 aa28.08■■■□□ 2.09
NR1H3-229ENST00000527464 FAM9AQ8IZU1 332 aaPredicted RBP28.08■■■□□ 2.09
NR1H3-229ENST00000527464 KIF21BO75037 1637 aa28.03■■■□□ 2.08
NR1H3-229ENST00000527464 TTBK1Q5TCY1 1321 aaPredicted RBP28■■■□□ 2.07
NR1H3-229ENST00000527464 UHRF1BP1LA0JNW5 1464 aa28■■■□□ 2.07
NR1H3-229ENST00000527464 MAPKBP1O60336 1514 aa27.99■■■□□ 2.07
NR1H3-229ENST00000527464 UACAQ9BZF9 1416 aa27.99■■■□□ 2.07
NR1H3-229ENST00000527464 ABCC2Q92887 1545 aa27.95■■■□□ 2.06
NR1H3-229ENST00000527464 ABCC10Q5T3U5 1492 aa27.88■■■□□ 2.05
NR1H3-229ENST00000527464 KIF13AQ9H1H9 1805 aa27.86■■■□□ 2.05
NR1H3-229ENST00000527464 SAMD9Q5K651 1589 aa27.86■■■□□ 2.05
NR1H3-229ENST00000527464 KDM5BQ9UGL1 1544 aa27.84■■■□□ 2.05
NR1H3-229ENST00000527464 PLB1Q6P1J6 1458 aa27.81■■■□□ 2.04
NR1H3-229ENST00000527464 ABCA8O94911 1581 aa27.81■■■□□ 2.04
NR1H3-229ENST00000527464 FAM69CQ0P6D2 419 aa27.8■■■□□ 2.04
NR1H3-229ENST00000527464 DIP2BQ9P265 1576 aa27.79■■■□□ 2.04
NR1H3-229ENST00000527464 UBTFP17480 764 aaKnown RBP27.77■■■□□ 2.04
NR1H3-229ENST00000527464 P3H3Q8IVL6 736 aa27.77■■■□□ 2.04
NR1H3-229ENST00000527464 ASXL2Q76L83 1435 aa27.76■■■□□ 2.04
NR1H3-229ENST00000527464 ZCCHC11Q5TAX3 1644 aaKnown RBP27.74■■■□□ 2.03
NR1H3-229ENST00000527464 EFCAB5A4FU69 1503 aa27.74■■■□□ 2.03
NR1H3-229ENST00000527464 RANGAP1P46060 587 aaPredicted RBP27.69■■■□□ 2.02
NR1H3-229ENST00000527464 GLI2P10070 1586 aa27.66■■■□□ 2.02
NR1H3-229ENST00000527464 EHMT2Q96KQ7 1210 aa27.66■■■□□ 2.02
NR1H3-229ENST00000527464 FHOD3Q2V2M9 1422 aa27.65■■■□□ 2.02
NR1H3-229ENST00000527464 RAPGEF6Q8TEU7 1601 aa27.62■■■□□ 2.01
NR1H3-229ENST00000527464 WDR7Q9Y4E6 1490 aa27.61■■■□□ 2.01
NR1H3-229ENST00000527464 EPRSP07814 1512 aaKnown RBP27.61■■■□□ 2.01
NR1H3-229ENST00000527464 ATP10BO94823 1461 aa27.57■■■□□ 2
NR1H3-229ENST00000527464 TSPOAP1O95153 1857 aa27.54■■■□□ 2
NR1H3-229ENST00000527464 ARHGAP35Q9NRY4 1499 aa27.53■■■□□ 2
NR1H3-229ENST00000527464 NUP153P49790 1475 aaKnown RBP27.51■■■□□ 2
NR1H3-229ENST00000527464 FMN1Q68DA7 1419 aa27.5■■□□□ 1.99
NR1H3-229ENST00000527464 MAP3K4Q9Y6R4 1608 aa27.49■■□□□ 1.99
NR1H3-229ENST00000527464 ARID3CA6NKF2 412 aa27.47■■□□□ 1.99
NR1H3-229ENST00000527464 PPRC1Q5VV67 1664 aaKnown RBP27.45■■□□□ 1.98
NR1H3-229ENST00000527464 KCNH8Q96L42 1107 aa27.44■■□□□ 1.98
NR1H3-229ENST00000527464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.42■■□□□ 1.98
NR1H3-229ENST00000527464 HNRNPUL2Q1KMD3 747 aaKnown RBP27.42■■□□□ 1.98
NR1H3-229ENST00000527464 TEX14Q8IWB6 1497 aa27.42■■□□□ 1.98
NR1H3-229ENST00000527464 CFAP43Q8NDM7 1665 aa27.41■■□□□ 1.98
NR1H3-229ENST00000527464 KDM6BO15054 1643 aa27.39■■□□□ 1.98
NR1H3-229ENST00000527464 CD109Q6YHK3 1445 aa27.38■■□□□ 1.97
NR1H3-229ENST00000527464 MAGI3Q5TCQ9 1506 aa27.36■■□□□ 1.97
NR1H3-229ENST00000527464 PLEKHD1A6NEE1 506 aa27.35■■□□□ 1.97
NR1H3-229ENST00000527464 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
NR1H3-229ENST00000527464 CLIP1P30622 1438 aa27.33■■□□□ 1.96
NR1H3-229ENST00000527464 ABCA9Q8IUA7 1624 aa27.31■■□□□ 1.96
NR1H3-229ENST00000527464 ATP1B4Q9UN42 357 aaPredicted RBP27.27■■□□□ 1.96
NR1H3-229ENST00000527464 CDK13Q14004 1512 aaKnown RBP27.26■■□□□ 1.96
NR1H3-229ENST00000527464 CASKIN1Q8WXD9 1431 aa27.24■■□□□ 1.95
NR1H3-229ENST00000527464 CDK11AQ9UQ88 783 aaPredicted RBP27.24■■□□□ 1.95
NR1H3-229ENST00000527464 COL17A1Q9UMD9 1497 aaPredicted RBP27.2■■□□□ 1.95
NR1H3-229ENST00000527464 PHLDB1Q86UU1 1377 aa27.2■■□□□ 1.94
NR1H3-229ENST00000527464 PCF11O94913 1555 aaKnown RBP27.18■■□□□ 1.94
NR1H3-229ENST00000527464 CCDC18Q5T9S5 1454 aa27.17■■□□□ 1.94
NR1H3-229ENST00000527464 FYCO1Q9BQS8 1478 aa27.17■■□□□ 1.94
NR1H3-229ENST00000527464 CEP162Q5TB80 1403 aa27.16■■□□□ 1.94
NR1H3-229ENST00000527464 LRRIQ1Q96JM4 1722 aa27.14■■□□□ 1.94
NR1H3-229ENST00000527464 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.14■■□□□ 1.94
NR1H3-229ENST00000527464 NEO1Q92859 1461 aa27.13■■□□□ 1.93
NR1H3-229ENST00000527464 ARAP3Q8WWN8 1544 aa27.13■■□□□ 1.93
NR1H3-229ENST00000527464 TROQ12816 1431 aaPredicted RBP27.11■■□□□ 1.93
NR1H3-229ENST00000527464 LOC105371045A0A1W2PR82 267 aa27.09■■□□□ 1.93
NR1H3-229ENST00000527464 TTC37Q6PGP7 1564 aa27.08■■□□□ 1.93
NR1H3-229ENST00000527464 KIF14Q15058 1648 aa27.05■■□□□ 1.92
NR1H3-229ENST00000527464 CFAP74Q9C0B2 1584 aa27.04■■□□□ 1.92
NR1H3-229ENST00000527464 PLCH2O75038 1416 aa27.02■■□□□ 1.92
NR1H3-229ENST00000527464 FANCAO15360 1455 aa27.01■■□□□ 1.91
NR1H3-229ENST00000527464 AKNAQ7Z591 1439 aa26.99■■□□□ 1.91
NR1H3-229ENST00000527464 MYO5CQ9NQX4 1742 aa26.97■■□□□ 1.91
NR1H3-229ENST00000527464 EFCAB2Q5VUJ9 269 aa26.93■■□□□ 1.9
NR1H3-229ENST00000527464 DENND4BO75064 1496 aaPredicted RBP26.93■■□□□ 1.9
NR1H3-229ENST00000527464 RAPGEF3O95398 923 aa26.91■■□□□ 1.9
NR1H3-229ENST00000527464 AEBP2Q6ZN18 517 aaPredicted RBP26.91■■□□□ 1.9
NR1H3-229ENST00000527464 FRMPD1Q5SYB0 1578 aa26.88■■□□□ 1.89
NR1H3-229ENST00000527464 ADGRL1O94910 1474 aa26.87■■□□□ 1.89
NR1H3-229ENST00000527464 RICTORQ6R327 1708 aa26.86■■□□□ 1.89
NR1H3-229ENST00000527464 VPS8Q8N3P4 1428 aa26.86■■□□□ 1.89
NR1H3-229ENST00000527464 ARHGAP5Q13017 1502 aa26.85■■□□□ 1.89
NR1H3-229ENST00000527464 MTUS2Q5JR59 1369 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms