RNA–Protein interactions for RNA: ENST00000527373.1

UBQLN1-204, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-204ENST00000527373 CUL7Q14999 1698 aa17.31■□□□□ 0.36
UBQLN1-204ENST00000527373 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
UBQLN1-204ENST00000527373 EHMT2Q96KQ7 1210 aa17.27■□□□□ 0.36
UBQLN1-204ENST00000527373 RAPGEF2Q9Y4G8 1499 aa17.24■□□□□ 0.35
UBQLN1-204ENST00000527373 DNAJC5Q9H3Z4 198 aa17.21■□□□□ 0.35
UBQLN1-204ENST00000527373 PRXQ9BXM0 1461 aa17.2■□□□□ 0.34
UBQLN1-204ENST00000527373 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
UBQLN1-204ENST00000527373 NUP160Q12769 1436 aa17.18■□□□□ 0.34
UBQLN1-204ENST00000527373 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
UBQLN1-204ENST00000527373 CLASP1Q7Z460 1538 aa17.13■□□□□ 0.33
UBQLN1-204ENST00000527373 JPH4Q96JJ6 628 aa17.12■□□□□ 0.33
UBQLN1-204ENST00000527373 KIAA0586Q9BVV6 1533 aa17.11■□□□□ 0.33
UBQLN1-204ENST00000527373 KIF21BO75037 1637 aa17.1■□□□□ 0.33
UBQLN1-204ENST00000527373 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.32
UBQLN1-204ENST00000527373 GOLGA3Q08378 1498 aa17.07■□□□□ 0.32
UBQLN1-204ENST00000527373 IQGAP2Q13576 1575 aa17.04■□□□□ 0.32
UBQLN1-204ENST00000527373 CTTNBP2Q8WZ74 1663 aa17.03■□□□□ 0.32
UBQLN1-204ENST00000527373 PRG4Q92954 1404 aaPredicted RBP17.03■□□□□ 0.32
UBQLN1-204ENST00000527373 ARHGEF11O15085 1522 aa17.02■□□□□ 0.32
UBQLN1-204ENST00000527373 TTBK1Q5TCY1 1321 aaPredicted RBP17.01■□□□□ 0.31
UBQLN1-204ENST00000527373 LOC105371045A0A1W2PR82 267 aa17■□□□□ 0.31
UBQLN1-204ENST00000527373 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
UBQLN1-204ENST00000527373 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
UBQLN1-204ENST00000527373 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
UBQLN1-204ENST00000527373 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
UBQLN1-204ENST00000527373 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
UBQLN1-204ENST00000527373 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
UBQLN1-204ENST00000527373 CARMIL2Q6F5E8 1435 aa16.96■□□□□ 0.31
UBQLN1-204ENST00000527373 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
UBQLN1-204ENST00000527373 UGGT2Q9NYU1 1516 aa16.93■□□□□ 0.3
UBQLN1-204ENST00000527373 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
UBQLN1-204ENST00000527373 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.3
UBQLN1-204ENST00000527373 DISP1Q96F81 1524 aa16.89■□□□□ 0.29
UBQLN1-204ENST00000527373 PTPRGP23470 1445 aa16.87■□□□□ 0.29
UBQLN1-204ENST00000527373 KIAA0556O60303 1618 aa16.86■□□□□ 0.29
UBQLN1-204ENST00000527373 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
UBQLN1-204ENST00000527373 SAMD9Q5K651 1589 aa16.8■□□□□ 0.28
UBQLN1-204ENST00000527373 EFCAB5A4FU69 1503 aa16.8■□□□□ 0.28
UBQLN1-204ENST00000527373 CLIP1P30622 1438 aa16.79■□□□□ 0.28
UBQLN1-204ENST00000527373 ARHGAP35Q9NRY4 1499 aa16.78■□□□□ 0.28
UBQLN1-204ENST00000527373 CEP162Q5TB80 1403 aa16.77■□□□□ 0.27
UBQLN1-204ENST00000527373 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.27
UBQLN1-204ENST00000527373 ATP1B4Q9UN42 357 aaPredicted RBP16.76■□□□□ 0.27
UBQLN1-204ENST00000527373 UACAQ9BZF9 1416 aa16.73■□□□□ 0.27
UBQLN1-204ENST00000527373 ARID3CA6NKF2 412 aa16.73■□□□□ 0.27
UBQLN1-204ENST00000527373 PLB1Q6P1J6 1458 aa16.72■□□□□ 0.27
UBQLN1-204ENST00000527373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
UBQLN1-204ENST00000527373 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
UBQLN1-204ENST00000527373 FMN1Q68DA7 1419 aa16.68■□□□□ 0.26
UBQLN1-204ENST00000527373 ADCY10Q96PN6 1610 aa16.67■□□□□ 0.26
UBQLN1-204ENST00000527373 ABCC2Q92887 1545 aa16.66■□□□□ 0.26
UBQLN1-204ENST00000527373 ABCA8O94911 1581 aa16.65■□□□□ 0.26
UBQLN1-204ENST00000527373 UHRF1BP1LA0JNW5 1464 aa16.65■□□□□ 0.26
UBQLN1-204ENST00000527373 RAPGEF6Q8TEU7 1601 aa16.64■□□□□ 0.25
UBQLN1-204ENST00000527373 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
UBQLN1-204ENST00000527373 KDM5BQ9UGL1 1544 aa16.58■□□□□ 0.24
UBQLN1-204ENST00000527373 ATP10BO94823 1461 aa16.57■□□□□ 0.24
UBQLN1-204ENST00000527373 NUP153P49790 1475 aaKnown RBP16.57■□□□□ 0.24
UBQLN1-204ENST00000527373 ZCCHC11Q5TAX3 1644 aaKnown RBP16.56■□□□□ 0.24
UBQLN1-204ENST00000527373 CASKIN1Q8WXD9 1431 aa16.56■□□□□ 0.24
UBQLN1-204ENST00000527373 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
UBQLN1-204ENST00000527373 PCF11O94913 1555 aaKnown RBP16.55■□□□□ 0.24
UBQLN1-204ENST00000527373 KCNH8Q96L42 1107 aa16.55■□□□□ 0.24
UBQLN1-204ENST00000527373 ASXL2Q76L83 1435 aa16.53■□□□□ 0.24
UBQLN1-204ENST00000527373 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
UBQLN1-204ENST00000527373 PLEKHD1A6NEE1 506 aa16.53■□□□□ 0.24
UBQLN1-204ENST00000527373 CDK13Q14004 1512 aaKnown RBP16.52■□□□□ 0.24
UBQLN1-204ENST00000527373 CDK11AQ9UQ88 783 aaPredicted RBP16.52■□□□□ 0.24
UBQLN1-204ENST00000527373 FYCO1Q9BQS8 1478 aa16.52■□□□□ 0.23
UBQLN1-204ENST00000527373 EPRSP07814 1512 aaKnown RBP16.51■□□□□ 0.23
UBQLN1-204ENST00000527373 MAPKBP1O60336 1514 aa16.5■□□□□ 0.23
UBQLN1-204ENST00000527373 APLP2Q06481 763 aa16.5■□□□□ 0.23
UBQLN1-204ENST00000527373 FAM69CQ0P6D2 419 aa16.5■□□□□ 0.23
UBQLN1-204ENST00000527373 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
UBQLN1-204ENST00000527373 WDR7Q9Y4E6 1490 aa16.47■□□□□ 0.23
UBQLN1-204ENST00000527373 LRRIQ1Q96JM4 1722 aa16.45■□□□□ 0.22
UBQLN1-204ENST00000527373 ABCC10Q5T3U5 1492 aa16.43■□□□□ 0.22
UBQLN1-204ENST00000527373 MTUS2Q5JR59 1369 aa16.4■□□□□ 0.22
UBQLN1-204ENST00000527373 DIP2BQ9P265 1576 aa16.39■□□□□ 0.21
UBQLN1-204ENST00000527373 TROQ12816 1431 aaPredicted RBP16.38■□□□□ 0.21
UBQLN1-204ENST00000527373 KIF13AQ9H1H9 1805 aa16.37■□□□□ 0.21
UBQLN1-204ENST00000527373 TSPOAP1O95153 1857 aa16.35■□□□□ 0.21
UBQLN1-204ENST00000527373 TIAM1Q13009 1591 aa16.35■□□□□ 0.21
UBQLN1-204ENST00000527373 KANK4Q5T7N3 995 aaPredicted RBP16.34■□□□□ 0.21
UBQLN1-204ENST00000527373 CD109Q6YHK3 1445 aa16.34■□□□□ 0.21
UBQLN1-204ENST00000527373 MAGI3Q5TCQ9 1506 aa16.34■□□□□ 0.21
UBQLN1-204ENST00000527373 GLI2P10070 1586 aa16.34■□□□□ 0.21
UBQLN1-204ENST00000527373 CFAP43Q8NDM7 1665 aa16.33■□□□□ 0.2
UBQLN1-204ENST00000527373 KIF14Q15058 1648 aa16.32■□□□□ 0.2
UBQLN1-204ENST00000527373 PPARGC1BQ86YN6 1023 aaKnown RBP16.32■□□□□ 0.2
UBQLN1-204ENST00000527373 MAP3K1Q13233 1512 aa16.3■□□□□ 0.2
UBQLN1-204ENST00000527373 EHBP1L1Q8N3D4 1523 aa16.29■□□□□ 0.2
UBQLN1-204ENST00000527373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.29■□□□□ 0.2
UBQLN1-204ENST00000527373 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
UBQLN1-204ENST00000527373 ABCA9Q8IUA7 1624 aa16.28■□□□□ 0.2
UBQLN1-204ENST00000527373 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.2
UBQLN1-204ENST00000527373 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
UBQLN1-204ENST00000527373 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
UBQLN1-204ENST00000527373 ZNF777Q9ULD5 760 aaPredicted RBP16.24■□□□□ 0.19
UBQLN1-204ENST00000527373 SUPT6HQ7KZ85 1726 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms