RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 KIF13AQ9H1H9 1805 aa29.51■■■□□ 2.31
LTBP3-208ENST00000527339 RUSC2Q8N2Y8 1516 aa29.45■■■□□ 2.31
LTBP3-208ENST00000527339 CUL7Q14999 1698 aa29.44■■■□□ 2.3
LTBP3-208ENST00000527339 IGF1RP08069 1367 aa29.42■■■□□ 2.3
LTBP3-208ENST00000527339 ADCY10Q96PN6 1610 aa29.31■■■□□ 2.28
LTBP3-208ENST00000527339 ABCC10Q5T3U5 1492 aa29.3■■■□□ 2.28
LTBP3-208ENST00000527339 FAM69CQ0P6D2 419 aa29.3■■■□□ 2.28
LTBP3-208ENST00000527339 CARMIL1Q5VZK9 1371 aa29.26■■■□□ 2.28
LTBP3-208ENST00000527339 MAPKBP1O60336 1514 aa29.25■■■□□ 2.27
LTBP3-208ENST00000527339 KIAA0586Q9BVV6 1533 aa29.25■■■□□ 2.27
LTBP3-208ENST00000527339 DIP2BQ9P265 1576 aa29.23■■■□□ 2.27
LTBP3-208ENST00000527339 NPM1P06748 294 aaKnown RBP eCLIP29.2■■■□□ 2.26
LTBP3-208ENST00000527339 CHIC1Q5VXU3 224 aa29.19■■■□□ 2.26
LTBP3-208ENST00000527339 RAPGEF2Q9Y4G8 1499 aa29.12■■■□□ 2.25
LTBP3-208ENST00000527339 EEA1Q15075 1411 aa29.09■■■□□ 2.25
LTBP3-208ENST00000527339 PTPRGP23470 1445 aa29.05■■■□□ 2.24
LTBP3-208ENST00000527339 TSPOAP1O95153 1857 aa29.05■■■□□ 2.24
LTBP3-208ENST00000527339 TTBK1Q5TCY1 1321 aaPredicted RBP29.04■■■□□ 2.24
LTBP3-208ENST00000527339 PRXQ9BXM0 1461 aa29.03■■■□□ 2.24
LTBP3-208ENST00000527339 KDM4FA0A1W2PPD8 638 aa29■■■□□ 2.23
LTBP3-208ENST00000527339 KDM6BO15054 1643 aa29■■■□□ 2.23
LTBP3-208ENST00000527339 CSRNP3Q8WYN3 585 aa28.98■■■□□ 2.23
LTBP3-208ENST00000527339 IQGAP2Q13576 1575 aa28.96■■■□□ 2.23
LTBP3-208ENST00000527339 TNIKQ9UKE5 1360 aa28.95■■■□□ 2.22
LTBP3-208ENST00000527339 ABCC2Q92887 1545 aa28.94■■■□□ 2.22
LTBP3-208ENST00000527339 CTTNBP2Q8WZ74 1663 aa28.93■■■□□ 2.22
LTBP3-208ENST00000527339 CARMIL2Q6F5E8 1435 aa28.9■■■□□ 2.22
LTBP3-208ENST00000527339 ASXL2Q76L83 1435 aa28.9■■■□□ 2.22
LTBP3-208ENST00000527339 DISP1Q96F81 1524 aa28.89■■■□□ 2.22
LTBP3-208ENST00000527339 PPRC1Q5VV67 1664 aaKnown RBP28.87■■■□□ 2.21
LTBP3-208ENST00000527339 FAM9AQ8IZU1 332 aaPredicted RBP28.85■■■□□ 2.21
LTBP3-208ENST00000527339 UHRF1BP1LA0JNW5 1464 aa28.84■■■□□ 2.21
LTBP3-208ENST00000527339 PLB1Q6P1J6 1458 aa28.81■■■□□ 2.2
LTBP3-208ENST00000527339 UACAQ9BZF9 1416 aa28.81■■■□□ 2.2
LTBP3-208ENST00000527339 KIF21BO75037 1637 aa28.8■■■□□ 2.2
LTBP3-208ENST00000527339 GLI2P10070 1586 aa28.8■■■□□ 2.2
LTBP3-208ENST00000527339 UGGT2Q9NYU1 1516 aa28.79■■■□□ 2.2
LTBP3-208ENST00000527339 COL17A1Q9UMD9 1497 aaPredicted RBP28.77■■■□□ 2.2
LTBP3-208ENST00000527339 KDM5BQ9UGL1 1544 aa28.74■■■□□ 2.19
LTBP3-208ENST00000527339 EPRSP07814 1512 aaKnown RBP28.72■■■□□ 2.19
LTBP3-208ENST00000527339 KIAA0556O60303 1618 aa28.68■■■□□ 2.18
LTBP3-208ENST00000527339 ZCCHC11Q5TAX3 1644 aaKnown RBP28.68■■■□□ 2.18
LTBP3-208ENST00000527339 MAP3K4Q9Y6R4 1608 aa28.66■■■□□ 2.18
LTBP3-208ENST00000527339 GOLGA3Q08378 1498 aa28.63■■■□□ 2.17
LTBP3-208ENST00000527339 ADGRL1O94910 1474 aa28.6■■■□□ 2.17
LTBP3-208ENST00000527339 WDR7Q9Y4E6 1490 aa28.53■■■□□ 2.16
LTBP3-208ENST00000527339 SAMD9Q5K651 1589 aa28.51■■■□□ 2.15
LTBP3-208ENST00000527339 TEX14Q8IWB6 1497 aa28.51■■■□□ 2.15
LTBP3-208ENST00000527339 UBTFP17480 764 aaKnown RBP28.47■■■□□ 2.15
LTBP3-208ENST00000527339 ABCA8O94911 1581 aa28.46■■■□□ 2.15
LTBP3-208ENST00000527339 EHMT2Q96KQ7 1210 aa28.45■■■□□ 2.14
LTBP3-208ENST00000527339 KCNH8Q96L42 1107 aa28.42■■■□□ 2.14
LTBP3-208ENST00000527339 CD109Q6YHK3 1445 aa28.4■■■□□ 2.14
LTBP3-208ENST00000527339 EFCAB5A4FU69 1503 aa28.39■■■□□ 2.14
LTBP3-208ENST00000527339 ILDR1Q86SU0 546 aaPredicted RBP28.39■■■□□ 2.14
LTBP3-208ENST00000527339 MAGI3Q5TCQ9 1506 aa28.38■■■□□ 2.13
LTBP3-208ENST00000527339 RANGAP1P46060 587 aaPredicted RBP28.36■■■□□ 2.13
LTBP3-208ENST00000527339 P3H3Q8IVL6 736 aa28.36■■■□□ 2.13
LTBP3-208ENST00000527339 CFAP43Q8NDM7 1665 aa28.35■■■□□ 2.13
LTBP3-208ENST00000527339 HECW2Q9P2P5 1572 aa28.32■■■□□ 2.12
LTBP3-208ENST00000527339 ARID3CA6NKF2 412 aa28.31■■■□□ 2.12
LTBP3-208ENST00000527339 FHOD3Q2V2M9 1422 aa28.28■■■□□ 2.12
LTBP3-208ENST00000527339 ATP10BO94823 1461 aa28.26■■■□□ 2.11
LTBP3-208ENST00000527339 RAPGEF6Q8TEU7 1601 aa28.23■■■□□ 2.11
LTBP3-208ENST00000527339 ARHGAP35Q9NRY4 1499 aa28.21■■■□□ 2.11
LTBP3-208ENST00000527339 ARAP3Q8WWN8 1544 aa28.18■■■□□ 2.1
LTBP3-208ENST00000527339 ABCA9Q8IUA7 1624 aa28.11■■■□□ 2.09
LTBP3-208ENST00000527339 FMN1Q68DA7 1419 aa28.11■■■□□ 2.09
LTBP3-208ENST00000527339 NUP153P49790 1475 aaKnown RBP28.08■■■□□ 2.09
LTBP3-208ENST00000527339 RAPGEF3O95398 923 aa28.08■■■□□ 2.09
LTBP3-208ENST00000527339 CLIP1P30622 1438 aa28.06■■■□□ 2.08
LTBP3-208ENST00000527339 HECW1Q76N89 1606 aa28■■■□□ 2.07
LTBP3-208ENST00000527339 FRMPD1Q5SYB0 1578 aa28■■■□□ 2.07
LTBP3-208ENST00000527339 ADAMTSL3P82987 1691 aa27.99■■■□□ 2.07
LTBP3-208ENST00000527339 PHLDB1Q86UU1 1377 aa27.99■■■□□ 2.07
LTBP3-208ENST00000527339 NEO1Q92859 1461 aa27.97■■■□□ 2.07
LTBP3-208ENST00000527339 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
LTBP3-208ENST00000527339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.96■■■□□ 2.07
LTBP3-208ENST00000527339 HNRNPUL2Q1KMD3 747 aaKnown RBP27.96■■■□□ 2.07
LTBP3-208ENST00000527339 PTPRMP28827 1452 aa27.95■■■□□ 2.07
LTBP3-208ENST00000527339 CEP162Q5TB80 1403 aa27.95■■■□□ 2.07
LTBP3-208ENST00000527339 PCF11O94913 1555 aaKnown RBP27.9■■■□□ 2.06
LTBP3-208ENST00000527339 CDK13Q14004 1512 aaKnown RBP27.89■■■□□ 2.06
LTBP3-208ENST00000527339 CASKIN1Q8WXD9 1431 aa27.88■■■□□ 2.05
LTBP3-208ENST00000527339 BCORL1Q5H9F3 1711 aa27.87■■■□□ 2.05
LTBP3-208ENST00000527339 ATP1B4Q9UN42 357 aaPredicted RBP27.87■■■□□ 2.05
LTBP3-208ENST00000527339 LRRIQ1Q96JM4 1722 aa27.87■■■□□ 2.05
LTBP3-208ENST00000527339 MADDQ8WXG6 1647 aa27.85■■■□□ 2.05
LTBP3-208ENST00000527339 FYCO1Q9BQS8 1478 aa27.84■■■□□ 2.05
LTBP3-208ENST00000527339 PLEKHD1A6NEE1 506 aa27.83■■■□□ 2.05
LTBP3-208ENST00000527339 RICTORQ6R327 1708 aa27.81■■■□□ 2.04
LTBP3-208ENST00000527339 ARID4BQ4LE39 1312 aaPredicted RBP27.81■■■□□ 2.04
LTBP3-208ENST00000527339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.81■■■□□ 2.04
LTBP3-208ENST00000527339 AKNAQ7Z591 1439 aa27.8■■■□□ 2.04
LTBP3-208ENST00000527339 CCDC18Q5T9S5 1454 aa27.8■■■□□ 2.04
LTBP3-208ENST00000527339 ARHGEF40Q8TER5 1519 aa27.78■■■□□ 2.04
LTBP3-208ENST00000527339 DENND4BO75064 1496 aaPredicted RBP27.78■■■□□ 2.04
LTBP3-208ENST00000527339 TTC37Q6PGP7 1564 aa27.77■■■□□ 2.04
LTBP3-208ENST00000527339 SIGLEC1Q9BZZ2 1709 aa27.77■■■□□ 2.04
LTBP3-208ENST00000527339 FANCAO15360 1455 aa27.76■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms