RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
PRPF40B-204ENST00000527253 CUL7Q14999 1698 aa18.01■□□□□ 0.47
PRPF40B-204ENST00000527253 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
PRPF40B-204ENST00000527253 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
PRPF40B-204ENST00000527253 RAPGEF2Q9Y4G8 1499 aa17.85■□□□□ 0.45
PRPF40B-204ENST00000527253 IQGAP2Q13576 1575 aa17.81■□□□□ 0.44
PRPF40B-204ENST00000527253 ADCY10Q96PN6 1610 aa17.8■□□□□ 0.44
PRPF40B-204ENST00000527253 PTPRGP23470 1445 aa17.79■□□□□ 0.44
PRPF40B-204ENST00000527253 TTBK1Q5TCY1 1321 aaPredicted RBP17.77■□□□□ 0.44
PRPF40B-204ENST00000527253 TNIKQ9UKE5 1360 aa17.77■□□□□ 0.43
PRPF40B-204ENST00000527253 DISP1Q96F81 1524 aa17.77■□□□□ 0.43
PRPF40B-204ENST00000527253 CARMIL2Q6F5E8 1435 aa17.76■□□□□ 0.43
PRPF40B-204ENST00000527253 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
PRPF40B-204ENST00000527253 NPM1P06748 294 aaKnown RBP eCLIP17.74■□□□□ 0.43
PRPF40B-204ENST00000527253 UGGT2Q9NYU1 1516 aa17.73■□□□□ 0.43
PRPF40B-204ENST00000527253 KIF13AQ9H1H9 1805 aa17.73■□□□□ 0.43
PRPF40B-204ENST00000527253 MAPKBP1O60336 1514 aa17.72■□□□□ 0.43
PRPF40B-204ENST00000527253 ABCC10Q5T3U5 1492 aa17.7■□□□□ 0.42
PRPF40B-204ENST00000527253 FAM69CQ0P6D2 419 aa17.7■□□□□ 0.42
PRPF40B-204ENST00000527253 CSRNP3Q8WYN3 585 aa17.67■□□□□ 0.42
PRPF40B-204ENST00000527253 KIAA0556O60303 1618 aa17.65■□□□□ 0.42
PRPF40B-204ENST00000527253 UACAQ9BZF9 1416 aa17.65■□□□□ 0.42
PRPF40B-204ENST00000527253 ABCC2Q92887 1545 aa17.65■□□□□ 0.42
PRPF40B-204ENST00000527253 DIP2BQ9P265 1576 aa17.65■□□□□ 0.42
PRPF40B-204ENST00000527253 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.42
PRPF40B-204ENST00000527253 UHRF1BP1LA0JNW5 1464 aa17.64■□□□□ 0.41
PRPF40B-204ENST00000527253 ASXL2Q76L83 1435 aa17.58■□□□□ 0.41
PRPF40B-204ENST00000527253 KDM5BQ9UGL1 1544 aa17.57■□□□□ 0.4
PRPF40B-204ENST00000527253 FAM9AQ8IZU1 332 aaPredicted RBP17.57■□□□□ 0.4
PRPF40B-204ENST00000527253 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
PRPF40B-204ENST00000527253 PLB1Q6P1J6 1458 aa17.56■□□□□ 0.4
PRPF40B-204ENST00000527253 EEA1Q15075 1411 aa17.55■□□□□ 0.4
PRPF40B-204ENST00000527253 CHIC1Q5VXU3 224 aa17.55■□□□□ 0.4
PRPF40B-204ENST00000527253 P3H3Q8IVL6 736 aa17.52■□□□□ 0.4
PRPF40B-204ENST00000527253 ZCCHC11Q5TAX3 1644 aaKnown RBP17.51■□□□□ 0.39
PRPF40B-204ENST00000527253 ABCA8O94911 1581 aa17.51■□□□□ 0.39
PRPF40B-204ENST00000527253 TSPOAP1O95153 1857 aa17.51■□□□□ 0.39
PRPF40B-204ENST00000527253 GLI2P10070 1586 aa17.49■□□□□ 0.39
PRPF40B-204ENST00000527253 EPRSP07814 1512 aaKnown RBP17.48■□□□□ 0.39
PRPF40B-204ENST00000527253 PPRC1Q5VV67 1664 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-204ENST00000527253 SAMD9Q5K651 1589 aa17.45■□□□□ 0.38
PRPF40B-204ENST00000527253 RANGAP1P46060 587 aaPredicted RBP17.43■□□□□ 0.38
PRPF40B-204ENST00000527253 KIF21BO75037 1637 aa17.42■□□□□ 0.38
PRPF40B-204ENST00000527253 WDR7Q9Y4E6 1490 aa17.42■□□□□ 0.38
PRPF40B-204ENST00000527253 KDM6BO15054 1643 aa17.41■□□□□ 0.38
PRPF40B-204ENST00000527253 ARID3CA6NKF2 412 aa17.41■□□□□ 0.38
PRPF40B-204ENST00000527253 MAP3K4Q9Y6R4 1608 aa17.39■□□□□ 0.38
PRPF40B-204ENST00000527253 KCNH8Q96L42 1107 aa17.39■□□□□ 0.37
PRPF40B-204ENST00000527253 ATP10BO94823 1461 aa17.38■□□□□ 0.37
PRPF40B-204ENST00000527253 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
PRPF40B-204ENST00000527253 COL17A1Q9UMD9 1497 aaPredicted RBP17.37■□□□□ 0.37
PRPF40B-204ENST00000527253 FHOD3Q2V2M9 1422 aa17.37■□□□□ 0.37
PRPF40B-204ENST00000527253 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
PRPF40B-204ENST00000527253 RAPGEF6Q8TEU7 1601 aa17.32■□□□□ 0.36
PRPF40B-204ENST00000527253 CD109Q6YHK3 1445 aa17.31■□□□□ 0.36
PRPF40B-204ENST00000527253 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-204ENST00000527253 TEX14Q8IWB6 1497 aa17.31■□□□□ 0.36
PRPF40B-204ENST00000527253 UBTFP17480 764 aaKnown RBP17.3■□□□□ 0.36
PRPF40B-204ENST00000527253 MAGI3Q5TCQ9 1506 aa17.28■□□□□ 0.36
PRPF40B-204ENST00000527253 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.36
PRPF40B-204ENST00000527253 CFAP43Q8NDM7 1665 aa17.27■□□□□ 0.36
PRPF40B-204ENST00000527253 KDM4FA0A1W2PPD8 638 aa17.26■□□□□ 0.35
PRPF40B-204ENST00000527253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-204ENST00000527253 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
PRPF40B-204ENST00000527253 ARHGAP35Q9NRY4 1499 aa17.22■□□□□ 0.35
PRPF40B-204ENST00000527253 ABCA9Q8IUA7 1624 aa17.21■□□□□ 0.35
PRPF40B-204ENST00000527253 PLEKHD1A6NEE1 506 aa17.18■□□□□ 0.34
PRPF40B-204ENST00000527253 CDK13Q14004 1512 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-204ENST00000527253 ARAP3Q8WWN8 1544 aa17.15■□□□□ 0.34
PRPF40B-204ENST00000527253 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
PRPF40B-204ENST00000527253 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
PRPF40B-204ENST00000527253 ADGRL1O94910 1474 aa17.11■□□□□ 0.33
PRPF40B-204ENST00000527253 PHLDB1Q86UU1 1377 aa17.1■□□□□ 0.33
PRPF40B-204ENST00000527253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.1■□□□□ 0.33
PRPF40B-204ENST00000527253 RAPGEF3O95398 923 aa17.09■□□□□ 0.33
PRPF40B-204ENST00000527253 NEO1Q92859 1461 aa17.09■□□□□ 0.33
PRPF40B-204ENST00000527253 HECW1Q76N89 1606 aa17.07■□□□□ 0.32
PRPF40B-204ENST00000527253 TTC37Q6PGP7 1564 aa17.06■□□□□ 0.32
PRPF40B-204ENST00000527253 LRRIQ1Q96JM4 1722 aa17.04■□□□□ 0.32
PRPF40B-204ENST00000527253 FRMPD1Q5SYB0 1578 aa17.03■□□□□ 0.32
PRPF40B-204ENST00000527253 AKNAQ7Z591 1439 aa17.03■□□□□ 0.32
PRPF40B-204ENST00000527253 FANCAO15360 1455 aa17.02■□□□□ 0.32
PRPF40B-204ENST00000527253 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
PRPF40B-204ENST00000527253 PLCH2O75038 1416 aa17■□□□□ 0.31
PRPF40B-204ENST00000527253 CLIP1P30622 1438 aa17■□□□□ 0.31
PRPF40B-204ENST00000527253 PCF11O94913 1555 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-204ENST00000527253 TROQ12816 1431 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-204ENST00000527253 CDK11AQ9UQ88 783 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-204ENST00000527253 KIF14Q15058 1648 aa16.99■□□□□ 0.31
PRPF40B-204ENST00000527253 DENND4BO75064 1496 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-204ENST00000527253 RICTORQ6R327 1708 aa16.96■□□□□ 0.3
PRPF40B-204ENST00000527253 CFAP74Q9C0B2 1584 aa16.94■□□□□ 0.3
PRPF40B-204ENST00000527253 SCAPERQ9BY12 1400 aa16.93■□□□□ 0.3
PRPF40B-204ENST00000527253 EFCAB2Q5VUJ9 269 aa16.92■□□□□ 0.3
PRPF40B-204ENST00000527253 CCDC18Q5T9S5 1454 aa16.92■□□□□ 0.3
PRPF40B-204ENST00000527253 FYCO1Q9BQS8 1478 aa16.92■□□□□ 0.3
PRPF40B-204ENST00000527253 MYO5CQ9NQX4 1742 aa16.9■□□□□ 0.3
PRPF40B-204ENST00000527253 YEATS2Q9ULM3 1422 aa16.89■□□□□ 0.29
PRPF40B-204ENST00000527253 ZMYM4Q5VZL5 1548 aa16.89■□□□□ 0.29
PRPF40B-204ENST00000527253 POGZQ7Z3K3 1410 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms