RNA–Protein interactions for RNA: ENST00000527056.5

MS4A4A-203, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 5

Gene MS4A4A, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-203ENST00000527056 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
MS4A4A-203ENST00000527056 ERCC6L2Q5T890 1561 aa21.91■■□□□ 1.1
MS4A4A-203ENST00000527056 PRG4Q92954 1404 aaPredicted RBP21.89■■□□□ 1.09
MS4A4A-203ENST00000527056 TRHP20396 242 aaPredicted RBP21.88■■□□□ 1.09
MS4A4A-203ENST00000527056 RUSC2Q8N2Y8 1516 aa21.86■■□□□ 1.09
MS4A4A-203ENST00000527056 KIAA0586Q9BVV6 1533 aa21.84■■□□□ 1.09
MS4A4A-203ENST00000527056 RAPGEF2Q9Y4G8 1499 aa21.75■■□□□ 1.07
MS4A4A-203ENST00000527056 IQGAP2Q13576 1575 aa21.66■■□□□ 1.06
MS4A4A-203ENST00000527056 CARMIL2Q6F5E8 1435 aa21.65■■□□□ 1.06
MS4A4A-203ENST00000527056 NPM1P06748 294 aaKnown RBP eCLIP21.63■■□□□ 1.05
MS4A4A-203ENST00000527056 TTBK1Q5TCY1 1321 aaPredicted RBP21.61■■□□□ 1.05
MS4A4A-203ENST00000527056 PTPRGP23470 1445 aa21.61■■□□□ 1.05
MS4A4A-203ENST00000527056 TNIKQ9UKE5 1360 aa21.59■■□□□ 1.05
MS4A4A-203ENST00000527056 PRXQ9BXM0 1461 aa21.58■■□□□ 1.05
MS4A4A-203ENST00000527056 CSRNP3Q8WYN3 585 aa21.57■■□□□ 1.04
MS4A4A-203ENST00000527056 UGGT2Q9NYU1 1516 aa21.54■■□□□ 1.04
MS4A4A-203ENST00000527056 ADCY10Q96PN6 1610 aa21.52■■□□□ 1.04
MS4A4A-203ENST00000527056 DISP1Q96F81 1524 aa21.52■■□□□ 1.04
MS4A4A-203ENST00000527056 EEA1Q15075 1411 aa21.52■■□□□ 1.04
MS4A4A-203ENST00000527056 CTTNBP2Q8WZ74 1663 aa21.49■■□□□ 1.03
MS4A4A-203ENST00000527056 FAM9AQ8IZU1 332 aaPredicted RBP21.47■■□□□ 1.03
MS4A4A-203ENST00000527056 MAPKBP1O60336 1514 aa21.45■■□□□ 1.02
MS4A4A-203ENST00000527056 KIAA0556O60303 1618 aa21.45■■□□□ 1.02
MS4A4A-203ENST00000527056 UACAQ9BZF9 1416 aa21.44■■□□□ 1.02
MS4A4A-203ENST00000527056 GOLGA3Q08378 1498 aa21.44■■□□□ 1.02
MS4A4A-203ENST00000527056 FAM69CQ0P6D2 419 aa21.43■■□□□ 1.02
MS4A4A-203ENST00000527056 ABCC2Q92887 1545 aa21.4■■□□□ 1.02
MS4A4A-203ENST00000527056 UHRF1BP1LA0JNW5 1464 aa21.4■■□□□ 1.02
MS4A4A-203ENST00000527056 ABCC10Q5T3U5 1492 aa21.4■■□□□ 1.02
MS4A4A-203ENST00000527056 KIF13AQ9H1H9 1805 aa21.37■■□□□ 1.01
MS4A4A-203ENST00000527056 DIP2BQ9P265 1576 aa21.33■■□□□ 1.01
MS4A4A-203ENST00000527056 P3H3Q8IVL6 736 aa21.32■■□□□ 1
MS4A4A-203ENST00000527056 PLB1Q6P1J6 1458 aa21.31■■□□□ 1
MS4A4A-203ENST00000527056 ASXL2Q76L83 1435 aa21.3■■□□□ 1
MS4A4A-203ENST00000527056 KDM5BQ9UGL1 1544 aa21.29■■□□□ 1
MS4A4A-203ENST00000527056 KIF21BO75037 1637 aa21.27■■□□□ 1
MS4A4A-203ENST00000527056 RANGAP1P46060 587 aaPredicted RBP21.27■■□□□ 1
MS4A4A-203ENST00000527056 ABCA8O94911 1581 aa21.23■□□□□ 0.99
MS4A4A-203ENST00000527056 ZCCHC11Q5TAX3 1644 aaKnown RBP21.23■□□□□ 0.99
MS4A4A-203ENST00000527056 EHMT2Q96KQ7 1210 aa21.23■□□□□ 0.99
MS4A4A-203ENST00000527056 UBTFP17480 764 aaKnown RBP21.21■□□□□ 0.99
MS4A4A-203ENST00000527056 SAMD9Q5K651 1589 aa21.21■□□□□ 0.99
MS4A4A-203ENST00000527056 GLI2P10070 1586 aa21.19■□□□□ 0.98
MS4A4A-203ENST00000527056 EPRSP07814 1512 aaKnown RBP21.17■□□□□ 0.98
MS4A4A-203ENST00000527056 TSPOAP1O95153 1857 aa21.17■□□□□ 0.98
MS4A4A-203ENST00000527056 WDR7Q9Y4E6 1490 aa21.15■□□□□ 0.98
MS4A4A-203ENST00000527056 ARID3CA6NKF2 412 aa21.14■□□□□ 0.97
MS4A4A-203ENST00000527056 FHOD3Q2V2M9 1422 aa21.13■□□□□ 0.97
MS4A4A-203ENST00000527056 KCNH8Q96L42 1107 aa21.11■□□□□ 0.97
MS4A4A-203ENST00000527056 EFCAB5A4FU69 1503 aa21.1■□□□□ 0.97
MS4A4A-203ENST00000527056 KDM6BO15054 1643 aa21.09■□□□□ 0.97
MS4A4A-203ENST00000527056 ATP10BO94823 1461 aa21.08■□□□□ 0.97
MS4A4A-203ENST00000527056 RAPGEF6Q8TEU7 1601 aa21.08■□□□□ 0.97
MS4A4A-203ENST00000527056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.08■□□□□ 0.97
MS4A4A-203ENST00000527056 HNRNPUL2Q1KMD3 747 aaKnown RBP21.08■□□□□ 0.97
MS4A4A-203ENST00000527056 MAP3K4Q9Y6R4 1608 aa21.05■□□□□ 0.96
MS4A4A-203ENST00000527056 TEX14Q8IWB6 1497 aa21.04■□□□□ 0.96
MS4A4A-203ENST00000527056 PPRC1Q5VV67 1664 aaKnown RBP21.03■□□□□ 0.96
MS4A4A-203ENST00000527056 CD109Q6YHK3 1445 aa21.02■□□□□ 0.96
MS4A4A-203ENST00000527056 NUP153P49790 1475 aaKnown RBP21.01■□□□□ 0.95
MS4A4A-203ENST00000527056 CFAP43Q8NDM7 1665 aa20.97■□□□□ 0.95
MS4A4A-203ENST00000527056 ARHGAP35Q9NRY4 1499 aa20.96■□□□□ 0.95
MS4A4A-203ENST00000527056 MAGI3Q5TCQ9 1506 aa20.95■□□□□ 0.94
MS4A4A-203ENST00000527056 PLEKHD1A6NEE1 506 aa20.95■□□□□ 0.94
MS4A4A-203ENST00000527056 FMN1Q68DA7 1419 aa20.95■□□□□ 0.94
MS4A4A-203ENST00000527056 ATP1B4Q9UN42 357 aaPredicted RBP20.94■□□□□ 0.94
MS4A4A-203ENST00000527056 COL17A1Q9UMD9 1497 aaPredicted RBP20.9■□□□□ 0.94
MS4A4A-203ENST00000527056 ABCA9Q8IUA7 1624 aa20.87■□□□□ 0.93
MS4A4A-203ENST00000527056 HECW1Q76N89 1606 aa20.85■□□□□ 0.93
MS4A4A-203ENST00000527056 CDK13Q14004 1512 aaKnown RBP20.84■□□□□ 0.93
MS4A4A-203ENST00000527056 CDK11AQ9UQ88 783 aaPredicted RBP20.82■□□□□ 0.92
MS4A4A-203ENST00000527056 PHLDB1Q86UU1 1377 aa20.81■□□□□ 0.92
MS4A4A-203ENST00000527056 CLIP1P30622 1438 aa20.79■□□□□ 0.92
MS4A4A-203ENST00000527056 NEO1Q92859 1461 aa20.77■□□□□ 0.92
MS4A4A-203ENST00000527056 SENP3Q9H4L4 574 aaPredicted RBP20.77■□□□□ 0.92
MS4A4A-203ENST00000527056 ARAP3Q8WWN8 1544 aa20.77■□□□□ 0.92
MS4A4A-203ENST00000527056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.75■□□□□ 0.91
MS4A4A-203ENST00000527056 CASKIN1Q8WXD9 1431 aa20.74■□□□□ 0.91
MS4A4A-203ENST00000527056 KDM4FA0A1W2PPD8 638 aa20.73■□□□□ 0.91
MS4A4A-203ENST00000527056 RAPGEF3O95398 923 aa20.7■□□□□ 0.9
MS4A4A-203ENST00000527056 PCF11O94913 1555 aaKnown RBP20.7■□□□□ 0.9
MS4A4A-203ENST00000527056 TTC37Q6PGP7 1564 aa20.7■□□□□ 0.9
MS4A4A-203ENST00000527056 TROQ12816 1431 aaPredicted RBP20.7■□□□□ 0.9
MS4A4A-203ENST00000527056 FANCAO15360 1455 aa20.69■□□□□ 0.9
MS4A4A-203ENST00000527056 CCDC18Q5T9S5 1454 aa20.69■□□□□ 0.9
MS4A4A-203ENST00000527056 AKNAQ7Z591 1439 aa20.68■□□□□ 0.9
MS4A4A-203ENST00000527056 FYCO1Q9BQS8 1478 aa20.66■□□□□ 0.9
MS4A4A-203ENST00000527056 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
MS4A4A-203ENST00000527056 ADGRL1O94910 1474 aa20.65■□□□□ 0.9
MS4A4A-203ENST00000527056 PLCH2O75038 1416 aa20.65■□□□□ 0.9
MS4A4A-203ENST00000527056 LRRIQ1Q96JM4 1722 aa20.64■□□□□ 0.9
MS4A4A-203ENST00000527056 KIF14Q15058 1648 aa20.64■□□□□ 0.9
MS4A4A-203ENST00000527056 DENND4BO75064 1496 aaPredicted RBP20.64■□□□□ 0.89
MS4A4A-203ENST00000527056 CEP162Q5TB80 1403 aa20.62■□□□□ 0.89
MS4A4A-203ENST00000527056 EFCAB2Q5VUJ9 269 aa20.62■□□□□ 0.89
MS4A4A-203ENST00000527056 LOC105371045A0A1W2PR82 267 aa20.6■□□□□ 0.89
MS4A4A-203ENST00000527056 FRMPD1Q5SYB0 1578 aa20.58■□□□□ 0.88
MS4A4A-203ENST00000527056 MYO5CQ9NQX4 1742 aa20.58■□□□□ 0.88
MS4A4A-203ENST00000527056 SCAPERQ9BY12 1400 aa20.57■□□□□ 0.88
MS4A4A-203ENST00000527056 ARHGAP5Q13017 1502 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms