RNA–Protein interactions for RNA: ENST00000527009.5

SCYL1-208, Transcript of SCY1 like pseudokinase 1, humanhuman

TSL 5 BASIC

Gene SCYL1, Length 2,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-208ENST00000527009 ZNF608Q9ULD9 1512 aaPredicted RBP22.97■■□□□ 1.27
SCYL1-208ENST00000527009 CUL7Q14999 1698 aa22.91■■□□□ 1.26
SCYL1-208ENST00000527009 ERCC6Q03468 1493 aa22.91■■□□□ 1.26
SCYL1-208ENST00000527009 CTTNBP2Q8WZ74 1663 aa22.84■■□□□ 1.25
SCYL1-208ENST00000527009 PCF11O94913 1555 aaKnown RBP22.84■■□□□ 1.25
SCYL1-208ENST00000527009 PBRM1Q86U86 1689 aa22.83■■□□□ 1.25
SCYL1-208ENST00000527009 ITGAEP38570 1179 aa22.82■■□□□ 1.24
SCYL1-208ENST00000527009 ZEB1P37275 1124 aaPredicted RBP22.81■■□□□ 1.24
SCYL1-208ENST00000527009 WDR62O43379 1518 aa22.8■■□□□ 1.24
SCYL1-208ENST00000527009 TIAM1Q13009 1591 aa22.75■■□□□ 1.23
SCYL1-208ENST00000527009 THOC2Q8NI27 1593 aaKnown RBP22.74■■□□□ 1.23
SCYL1-208ENST00000527009 ARID3CA6NKF2 412 aa22.74■■□□□ 1.23
SCYL1-208ENST00000527009 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
SCYL1-208ENST00000527009 IFT140Q96RY7 1462 aa22.7■■□□□ 1.22
SCYL1-208ENST00000527009 GRIN2BQ13224 1484 aa22.69■■□□□ 1.22
SCYL1-208ENST00000527009 EIF4G3O43432 1585 aaKnown RBP22.69■■□□□ 1.22
SCYL1-208ENST00000527009 SNAPC4Q5SXM2 1469 aa22.68■■□□□ 1.22
SCYL1-208ENST00000527009 FHAD1B1AJZ9 1412 aa22.68■■□□□ 1.22
SCYL1-208ENST00000527009 PHLDB1Q86UU1 1377 aa22.67■■□□□ 1.22
SCYL1-208ENST00000527009 LRRC9Q6ZRR7 1453 aa22.67■■□□□ 1.22
SCYL1-208ENST00000527009 FBLN2P98095 1184 aa22.66■■□□□ 1.22
SCYL1-208ENST00000527009 EFCAB5A4FU69 1503 aa22.64■■□□□ 1.21
SCYL1-208ENST00000527009 SAMD9Q5K651 1589 aa22.62■■□□□ 1.21
SCYL1-208ENST00000527009 LRRIQ1Q96JM4 1722 aa22.62■■□□□ 1.21
SCYL1-208ENST00000527009 CCNB3Q8WWL7 1395 aa22.61■■□□□ 1.21
SCYL1-208ENST00000527009 RRBP1Q9P2E9 1410 aaKnown RBP22.61■■□□□ 1.21
SCYL1-208ENST00000527009 CFAP43Q8NDM7 1665 aa22.59■■□□□ 1.21
SCYL1-208ENST00000527009 CASKIN1Q8WXD9 1431 aa22.59■■□□□ 1.21
SCYL1-208ENST00000527009 FAM50AQ14320 339 aaKnown RBP22.58■■□□□ 1.21
SCYL1-208ENST00000527009 FYCO1Q9BQS8 1478 aa22.57■■□□□ 1.2
SCYL1-208ENST00000527009 IQGAP2Q13576 1575 aa22.56■■□□□ 1.2
SCYL1-208ENST00000527009 FMN1Q68DA7 1419 aa22.53■■□□□ 1.2
SCYL1-208ENST00000527009 MAP3K1Q13233 1512 aa22.5■■□□□ 1.19
SCYL1-208ENST00000527009 CHMP7Q8WUX9 453 aaPredicted RBP22.5■■□□□ 1.19
SCYL1-208ENST00000527009 GRIN2AQ12879 1464 aa22.5■■□□□ 1.19
SCYL1-208ENST00000527009 MAGI3Q5TCQ9 1506 aa22.46■■□□□ 1.19
SCYL1-208ENST00000527009 MTUS2Q5JR59 1369 aa22.45■■□□□ 1.18
SCYL1-208ENST00000527009 CDK13Q14004 1512 aaKnown RBP22.45■■□□□ 1.18
SCYL1-208ENST00000527009 CEP170Q5SW79 1584 aa22.43■■□□□ 1.18
SCYL1-208ENST00000527009 DHX57Q6P158 1386 aaKnown RBP22.43■■□□□ 1.18
SCYL1-208ENST00000527009 DISP1Q96F81 1524 aa22.41■■□□□ 1.18
SCYL1-208ENST00000527009 KIAA0586Q9BVV6 1533 aa22.38■■□□□ 1.17
SCYL1-208ENST00000527009 RAB3GAP2Q9H2M9 1393 aa22.37■■□□□ 1.17
SCYL1-208ENST00000527009 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
SCYL1-208ENST00000527009 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
SCYL1-208ENST00000527009 UGGT2Q9NYU1 1516 aa22.35■■□□□ 1.17
SCYL1-208ENST00000527009 KIAA0556O60303 1618 aa22.35■■□□□ 1.17
SCYL1-208ENST00000527009 NCOA2Q15596 1464 aa22.34■■□□□ 1.17
SCYL1-208ENST00000527009 EPRSP07814 1512 aaKnown RBP22.32■■□□□ 1.16
SCYL1-208ENST00000527009 FGD6Q6ZV73 1430 aa22.31■■□□□ 1.16
SCYL1-208ENST00000527009 PTPRKQ15262 1439 aa22.3■■□□□ 1.16
SCYL1-208ENST00000527009 PLB1Q6P1J6 1458 aa22.27■■□□□ 1.16
SCYL1-208ENST00000527009 HECW1Q76N89 1606 aa22.27■■□□□ 1.16
SCYL1-208ENST00000527009 JPH4Q96JJ6 628 aa22.27■■□□□ 1.16
SCYL1-208ENST00000527009 NUP153P49790 1475 aaKnown RBP22.24■■□□□ 1.15
SCYL1-208ENST00000527009 CHIC2Q9UKJ5 165 aa22.23■■□□□ 1.15
SCYL1-208ENST00000527009 NUP160Q12769 1436 aa22.23■■□□□ 1.15
SCYL1-208ENST00000527009 EHBP1L1Q8N3D4 1523 aa22.22■■□□□ 1.15
SCYL1-208ENST00000527009 SETD5Q9C0A6 1442 aa22.22■■□□□ 1.15
SCYL1-208ENST00000527009 SUPT6HQ7KZ85 1726 aaKnown RBP22.21■■□□□ 1.15
SCYL1-208ENST00000527009 MYOM3Q5VTT5 1437 aa22.21■■□□□ 1.15
SCYL1-208ENST00000527009 CCDC18Q5T9S5 1454 aa22.18■■□□□ 1.14
SCYL1-208ENST00000527009 MAPKBP1O60336 1514 aa22.18■■□□□ 1.14
SCYL1-208ENST00000527009 SIN3AQ96ST3 1273 aa22.17■■□□□ 1.14
SCYL1-208ENST00000527009 ZNF644Q9H582 1327 aaPredicted RBP22.17■■□□□ 1.14
SCYL1-208ENST00000527009 RAPGEF6Q8TEU7 1601 aa22.16■■□□□ 1.14
SCYL1-208ENST00000527009 CHD1O14646 1710 aa22.16■■□□□ 1.14
SCYL1-208ENST00000527009 PRG4Q92954 1404 aaPredicted RBP22.16■■□□□ 1.14
SCYL1-208ENST00000527009 DIEXFQ68CQ4 756 aaKnown RBP22.15■■□□□ 1.14
SCYL1-208ENST00000527009 RRP7BPQ9NSQ0 103 aa22.15■■□□□ 1.14
SCYL1-208ENST00000527009 ARHGEF11O15085 1522 aa22.14■■□□□ 1.14
SCYL1-208ENST00000527009 PTPN23Q9H3S7 1636 aa22.14■■□□□ 1.13
SCYL1-208ENST00000527009 NEUROD1Q13562 356 aa22.13■■□□□ 1.13
SCYL1-208ENST00000527009 ZNF316A6NFI3 1004 aaPredicted RBP22.12■■□□□ 1.13
SCYL1-208ENST00000527009 ERCC6L2Q5T890 1561 aa22.07■■□□□ 1.12
SCYL1-208ENST00000527009 CARMIL2Q6F5E8 1435 aa22.05■■□□□ 1.12
SCYL1-208ENST00000527009 KIF14Q15058 1648 aa22.05■■□□□ 1.12
SCYL1-208ENST00000527009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.12
SCYL1-208ENST00000527009 KDM6BO15054 1643 aa22.03■■□□□ 1.12
SCYL1-208ENST00000527009 ZNF777Q9ULD5 760 aaPredicted RBP22.02■■□□□ 1.12
SCYL1-208ENST00000527009 NAIPQ13075 1403 aa22.02■■□□□ 1.12
SCYL1-208ENST00000527009 CLSPNQ9HAW4 1339 aa21.99■■□□□ 1.11
SCYL1-208ENST00000527009 HFM1A2PYH4 1435 aa21.98■■□□□ 1.11
SCYL1-208ENST00000527009 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
SCYL1-208ENST00000527009 TCOF1Q13428 1488 aaKnown RBP21.96■■□□□ 1.11
SCYL1-208ENST00000527009 ATP10BO94823 1461 aa21.95■■□□□ 1.1
SCYL1-208ENST00000527009 ABCA8O94911 1581 aa21.95■■□□□ 1.1
SCYL1-208ENST00000527009 PTPRGP23470 1445 aa21.94■■□□□ 1.1
SCYL1-208ENST00000527009 TROQ12816 1431 aaPredicted RBP21.94■■□□□ 1.1
SCYL1-208ENST00000527009 FOXD1Q16676 465 aa21.93■■□□□ 1.1
SCYL1-208ENST00000527009 CDK11AQ9UQ88 783 aaPredicted RBP21.92■■□□□ 1.1
SCYL1-208ENST00000527009 TRIM52Q96A61 297 aa21.9■■□□□ 1.1
SCYL1-208ENST00000527009 CFDP1Q9UEE9 299 aaPredicted RBP21.9■■□□□ 1.1
SCYL1-208ENST00000527009 HIRIP3Q9BW71 556 aaPredicted RBP21.89■■□□□ 1.09
SCYL1-208ENST00000527009 ABCC5O15440 1437 aa21.88■■□□□ 1.09
SCYL1-208ENST00000527009 GPATCH8Q9UKJ3 1502 aaKnown RBP21.88■■□□□ 1.09
SCYL1-208ENST00000527009 MIA2Q96PC5 1412 aa21.88■■□□□ 1.09
SCYL1-208ENST00000527009 DAPK1P53355 1430 aa21.87■■□□□ 1.09
SCYL1-208ENST00000527009 MIER1Q8N108 512 aa21.87■■□□□ 1.09
SCYL1-208ENST00000527009 PLEKHD1A6NEE1 506 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms