RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 CUL7Q14999 1698 aa33.11■■■□□ 2.89
CAPN1-206ENST00000526966 IGF1RP08069 1367 aa33.08■■■□□ 2.89
CAPN1-206ENST00000526966 KIF27Q86VH2 1401 aa33.07■■■□□ 2.88
CAPN1-206ENST00000526966 KIAA0586Q9BVV6 1533 aa33.06■■■□□ 2.88
CAPN1-206ENST00000526966 ADCY10Q96PN6 1610 aa33.01■■■□□ 2.87
CAPN1-206ENST00000526966 MAPKBP1O60336 1514 aa33■■■□□ 2.87
CAPN1-206ENST00000526966 AEBP2Q6ZN18 517 aaPredicted RBP32.99■■■□□ 2.87
CAPN1-206ENST00000526966 ABCC10Q5T3U5 1492 aa32.96■■■□□ 2.87
CAPN1-206ENST00000526966 DIP2BQ9P265 1576 aa32.92■■■□□ 2.86
CAPN1-206ENST00000526966 NPM1P06748 294 aaKnown RBP eCLIP32.87■■■□□ 2.85
CAPN1-206ENST00000526966 CARMIL1Q5VZK9 1371 aa32.83■■■□□ 2.85
CAPN1-206ENST00000526966 FAM69CQ0P6D2 419 aa32.83■■■□□ 2.85
CAPN1-206ENST00000526966 IQGAP2Q13576 1575 aa32.74■■■□□ 2.83
CAPN1-206ENST00000526966 PTPRGP23470 1445 aa32.73■■■□□ 2.83
CAPN1-206ENST00000526966 CARMIL2Q6F5E8 1435 aa32.69■■■□□ 2.82
CAPN1-206ENST00000526966 TNIKQ9UKE5 1360 aa32.69■■■□□ 2.82
CAPN1-206ENST00000526966 TSPOAP1O95153 1857 aa32.66■■■□□ 2.82
CAPN1-206ENST00000526966 KDM6BO15054 1643 aa32.64■■■□□ 2.82
CAPN1-206ENST00000526966 ABCC2Q92887 1545 aa32.64■■■□□ 2.82
CAPN1-206ENST00000526966 DISP1Q96F81 1524 aa32.59■■■□□ 2.81
CAPN1-206ENST00000526966 UHRF1BP1LA0JNW5 1464 aa32.58■■■□□ 2.81
CAPN1-206ENST00000526966 RAPGEF2Q9Y4G8 1499 aa32.55■■■□□ 2.8
CAPN1-206ENST00000526966 UGGT2Q9NYU1 1516 aa32.54■■■□□ 2.8
CAPN1-206ENST00000526966 TTBK1Q5TCY1 1321 aaPredicted RBP32.52■■■□□ 2.8
CAPN1-206ENST00000526966 ASXL2Q76L83 1435 aa32.51■■■□□ 2.8
CAPN1-206ENST00000526966 GLI2P10070 1586 aa32.51■■■□□ 2.79
CAPN1-206ENST00000526966 PLB1Q6P1J6 1458 aa32.51■■■□□ 2.79
CAPN1-206ENST00000526966 UACAQ9BZF9 1416 aa32.51■■■□□ 2.79
CAPN1-206ENST00000526966 PPRC1Q5VV67 1664 aaKnown RBP32.49■■■□□ 2.79
CAPN1-206ENST00000526966 KIAA0556O60303 1618 aa32.46■■■□□ 2.79
CAPN1-206ENST00000526966 KDM5BQ9UGL1 1544 aa32.43■■■□□ 2.78
CAPN1-206ENST00000526966 CTTNBP2Q8WZ74 1663 aa32.39■■■□□ 2.78
CAPN1-206ENST00000526966 ZCCHC11Q5TAX3 1644 aaKnown RBP32.37■■■□□ 2.77
CAPN1-206ENST00000526966 MAP3K4Q9Y6R4 1608 aa32.34■■■□□ 2.77
CAPN1-206ENST00000526966 EPRSP07814 1512 aaKnown RBP32.34■■■□□ 2.77
CAPN1-206ENST00000526966 KDM4FA0A1W2PPD8 638 aa32.32■■■□□ 2.76
CAPN1-206ENST00000526966 GOLGA3Q08378 1498 aa32.22■■■□□ 2.75
CAPN1-206ENST00000526966 PRXQ9BXM0 1461 aa32.21■■■□□ 2.75
CAPN1-206ENST00000526966 TEX14Q8IWB6 1497 aa32.2■■■□□ 2.75
CAPN1-206ENST00000526966 COL17A1Q9UMD9 1497 aaPredicted RBP32.2■■■□□ 2.75
CAPN1-206ENST00000526966 WDR7Q9Y4E6 1490 aa32.19■■■□□ 2.74
CAPN1-206ENST00000526966 ABCA8O94911 1581 aa32.17■■■□□ 2.74
CAPN1-206ENST00000526966 CFAP43Q8NDM7 1665 aa32.08■■■□□ 2.73
CAPN1-206ENST00000526966 ADGRL1O94910 1474 aa32.06■■■□□ 2.72
CAPN1-206ENST00000526966 MAGI3Q5TCQ9 1506 aa32.02■■■□□ 2.72
CAPN1-206ENST00000526966 CD109Q6YHK3 1445 aa31.97■■■□□ 2.71
CAPN1-206ENST00000526966 SAMD9Q5K651 1589 aa31.9■■■□□ 2.7
CAPN1-206ENST00000526966 KCNH8Q96L42 1107 aa31.89■■■□□ 2.7
CAPN1-206ENST00000526966 ATP10BO94823 1461 aa31.85■■■□□ 2.69
CAPN1-206ENST00000526966 CSRNP3Q8WYN3 585 aa31.82■■■□□ 2.68
CAPN1-206ENST00000526966 ABCA9Q8IUA7 1624 aa31.79■■■□□ 2.68
CAPN1-206ENST00000526966 P3H3Q8IVL6 736 aa31.79■■■□□ 2.68
CAPN1-206ENST00000526966 RAPGEF6Q8TEU7 1601 aa31.78■■■□□ 2.68
CAPN1-206ENST00000526966 FAM9AQ8IZU1 332 aaPredicted RBP31.78■■■□□ 2.68
CAPN1-206ENST00000526966 ARAP3Q8WWN8 1544 aa31.78■■■□□ 2.68
CAPN1-206ENST00000526966 EEA1Q15075 1411 aa31.74■■■□□ 2.67
CAPN1-206ENST00000526966 ARID3CA6NKF2 412 aa31.73■■■□□ 2.67
CAPN1-206ENST00000526966 KIF21BO75037 1637 aa31.71■■■□□ 2.67
CAPN1-206ENST00000526966 HECW2Q9P2P5 1572 aa31.7■■■□□ 2.67
CAPN1-206ENST00000526966 PHLDB1Q86UU1 1377 aa31.66■■■□□ 2.66
CAPN1-206ENST00000526966 NUP153P49790 1475 aaKnown RBP31.65■■■□□ 2.66
CAPN1-206ENST00000526966 NEO1Q92859 1461 aa31.61■■■□□ 2.65
CAPN1-206ENST00000526966 FHOD3Q2V2M9 1422 aa31.59■■■□□ 2.65
CAPN1-206ENST00000526966 FRMPD1Q5SYB0 1578 aa31.54■■■□□ 2.64
CAPN1-206ENST00000526966 EFCAB5A4FU69 1503 aa31.53■■■□□ 2.64
CAPN1-206ENST00000526966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.51■■■□□ 2.63
CAPN1-206ENST00000526966 HNRNPUL2Q1KMD3 747 aaKnown RBP31.51■■■□□ 2.63
CAPN1-206ENST00000526966 ADAMTSL3P82987 1691 aa31.5■■■□□ 2.63
CAPN1-206ENST00000526966 RAPGEF3O95398 923 aa31.47■■■□□ 2.63
CAPN1-206ENST00000526966 RANGAP1P46060 587 aaPredicted RBP31.46■■■□□ 2.63
CAPN1-206ENST00000526966 ILDR1Q86SU0 546 aaPredicted RBP31.46■■■□□ 2.63
CAPN1-206ENST00000526966 RICTORQ6R327 1708 aa31.42■■■□□ 2.62
CAPN1-206ENST00000526966 BCORL1Q5H9F3 1711 aa31.41■■■□□ 2.62
CAPN1-206ENST00000526966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.4■■■□□ 2.621e-9■■■■□ 24
CAPN1-206ENST00000526966 CFAP74Q9C0B2 1584 aa31.4■■■□□ 2.62
CAPN1-206ENST00000526966 PLEKHD1A6NEE1 506 aa31.4■■■□□ 2.62
CAPN1-206ENST00000526966 PTPRMP28827 1452 aa31.39■■■□□ 2.62
CAPN1-206ENST00000526966 ARHGEF40Q8TER5 1519 aa31.38■■■□□ 2.61
CAPN1-206ENST00000526966 TTC37Q6PGP7 1564 aa31.38■■■□□ 2.61
CAPN1-206ENST00000526966 FANCAO15360 1455 aa31.34■■■□□ 2.61
CAPN1-206ENST00000526966 DENND4BO75064 1496 aaPredicted RBP31.34■■■□□ 2.61
CAPN1-206ENST00000526966 AKNAQ7Z591 1439 aa31.33■■■□□ 2.61
CAPN1-206ENST00000526966 MADDQ8WXG6 1647 aa31.32■■■□□ 2.6
CAPN1-206ENST00000526966 CDK13Q14004 1512 aaKnown RBP31.31■■■□□ 2.6
CAPN1-206ENST00000526966 ZMYM4Q5VZL5 1548 aa31.29■■■□□ 2.6
CAPN1-206ENST00000526966 HECW1Q76N89 1606 aa31.22■■■□□ 2.59
CAPN1-206ENST00000526966 ARID4BQ4LE39 1312 aaPredicted RBP31.22■■■□□ 2.59
CAPN1-206ENST00000526966 RIMS1Q86UR5 1692 aaKnown RBP31.2■■■□□ 2.59
CAPN1-206ENST00000526966 FMN1Q68DA7 1419 aa31.2■■■□□ 2.59
CAPN1-206ENST00000526966 ARHGAP35Q9NRY4 1499 aa31.2■■■□□ 2.58
CAPN1-206ENST00000526966 ZFYVE16Q7Z3T8 1539 aa31.19■■■□□ 2.58
CAPN1-206ENST00000526966 SIGLEC1Q9BZZ2 1709 aa31.18■■■□□ 2.58
CAPN1-206ENST00000526966 PLCH2O75038 1416 aa31.17■■■□□ 2.58
CAPN1-206ENST00000526966 MAGI2Q86UL8 1455 aa31.17■■■□□ 2.58
CAPN1-206ENST00000526966 PCF11O94913 1555 aaKnown RBP31.17■■■□□ 2.58
CAPN1-206ENST00000526966 MYO5CQ9NQX4 1742 aa31.15■■■□□ 2.58
CAPN1-206ENST00000526966 YEATS2Q9ULM3 1422 aa31.15■■■□□ 2.58
CAPN1-206ENST00000526966 UBTFP17480 764 aaKnown RBP31.13■■■□□ 2.57
CAPN1-206ENST00000526966 POGZQ7Z3K3 1410 aa31.13■■■□□ 2.57
CAPN1-206ENST00000526966 LMTK3Q96Q04 1460 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms