RNA–Protein interactions for RNA: ENST00000526955.1

PKNOX2-202, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 1 (best)

Gene PKNOX2, Length 4,531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-202ENST00000526955 P3H3Q8IVL6 736 aa14.22□□□□□ -0.13
PKNOX2-202ENST00000526955 RBM19Q9Y4C8 960 aaKnown RBP14.21□□□□□ -0.13
PKNOX2-202ENST00000526955 SYNJ1O43426 1573 aa14.2□□□□□ -0.14
PKNOX2-202ENST00000526955 KIF27Q86VH2 1401 aa14.2□□□□□ -0.14
PKNOX2-202ENST00000526955 RRBP1Q9P2E9 1410 aaKnown RBP14.2□□□□□ -0.14
PKNOX2-202ENST00000526955 ERICH3Q5RHP9 1530 aa14.19□□□□□ -0.14
PKNOX2-202ENST00000526955 KANK4Q5T7N3 995 aaPredicted RBP14.18□□□□□ -0.14
PKNOX2-202ENST00000526955 SETD5Q9C0A6 1442 aa14.17□□□□□ -0.14
PKNOX2-202ENST00000526955 ZNF326Q5BKZ1 582 aaKnown RBP14.17□□□□□ -0.14
PKNOX2-202ENST00000526955 NEFMP07197 916 aa14.17□□□□□ -0.14
PKNOX2-202ENST00000526955 TONSLQ96HA7 1378 aa14.17□□□□□ -0.14
PKNOX2-202ENST00000526955 RAB3GAP2Q9H2M9 1393 aa14.16□□□□□ -0.14
PKNOX2-202ENST00000526955 CHGAP10645 457 aaKnown RBP14.14□□□□□ -0.15
PKNOX2-202ENST00000526955 DAXXQ9UER7 740 aaPredicted RBP14.14□□□□□ -0.15
PKNOX2-202ENST00000526955 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
PKNOX2-202ENST00000526955 ERICH6BQ5W0A0 696 aa14.11□□□□□ -0.15
PKNOX2-202ENST00000526955 ARAP1Q96P48 1450 aa14.1□□□□□ -0.15
PKNOX2-202ENST00000526955 TRHP20396 242 aaPredicted RBP14.1□□□□□ -0.15
PKNOX2-202ENST00000526955 CUX2O14529 1486 aa14.09□□□□□ -0.15
PKNOX2-202ENST00000526955 TOP2BQ02880 1626 aa14.07□□□□□ -0.16
PKNOX2-202ENST00000526955 KCNH8Q96L42 1107 aa14.07□□□□□ -0.16
PKNOX2-202ENST00000526955 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
PKNOX2-202ENST00000526955 RTL5Q5HYW3 569 aaPredicted RBP14.07□□□□□ -0.16
PKNOX2-202ENST00000526955 PRXQ9BXM0 1461 aa14.07□□□□□ -0.16
PKNOX2-202ENST00000526955 PEG3Q9GZU2 1588 aa14.06□□□□□ -0.16
PKNOX2-202ENST00000526955 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
PKNOX2-202ENST00000526955 SIN3AQ96ST3 1273 aa14.05□□□□□ -0.16
PKNOX2-202ENST00000526955 FANCIQ9NVI1 1328 aa14.05□□□□□ -0.16
PKNOX2-202ENST00000526955 PPP4R2Q9NY27 417 aa14.03□□□□□ -0.16
PKNOX2-202ENST00000526955 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
PKNOX2-202ENST00000526955 ARID4BQ4LE39 1312 aaPredicted RBP14.03□□□□□ -0.16
PKNOX2-202ENST00000526955 ERCC6Q03468 1493 aa14.02□□□□□ -0.16
PKNOX2-202ENST00000526955 PPP1R15AO75807 674 aaPredicted RBP14.02□□□□□ -0.16
PKNOX2-202ENST00000526955 TSPY4P0CV99 314 aa13.99□□□□□ -0.17
PKNOX2-202ENST00000526955 TSPY10P0CW01 314 aa13.99□□□□□ -0.17
PKNOX2-202ENST00000526955 HIRIP3Q9BW71 556 aaPredicted RBP13.99□□□□□ -0.17
PKNOX2-202ENST00000526955 ANP32AP39687 249 aaKnown RBP13.98□□□□□ -0.17
PKNOX2-202ENST00000526955 ARHGAP35Q9NRY4 1499 aa13.96□□□□□ -0.17
PKNOX2-202ENST00000526955 C14orf37Q86TY3 774 aa13.96□□□□□ -0.17
PKNOX2-202ENST00000526955 MAP3K1Q13233 1512 aa13.95□□□□□ -0.18
PKNOX2-202ENST00000526955 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
PKNOX2-202ENST00000526955 BIVM-ERCC5R4GMW8 1640 aa13.95□□□□□ -0.18
PKNOX2-202ENST00000526955 IRX6P78412 446 aaPredicted RBP13.94□□□□□ -0.18
PKNOX2-202ENST00000526955 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
PKNOX2-202ENST00000526955 UNC13AQ9UPW8 1703 aa13.92□□□□□ -0.18
PKNOX2-202ENST00000526955 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.18
PKNOX2-202ENST00000526955 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
PKNOX2-202ENST00000526955 LRRC9Q6ZRR7 1453 aa13.91□□□□□ -0.18
PKNOX2-202ENST00000526955 CARMIL1Q5VZK9 1371 aa13.91□□□□□ -0.18
PKNOX2-202ENST00000526955 MAPKBP1O60336 1514 aa13.9□□□□□ -0.18
PKNOX2-202ENST00000526955 A0A0G2JS52 829 aa13.89□□□□□ -0.19
PKNOX2-202ENST00000526955 MTUS2Q5JR59 1369 aa13.89□□□□□ -0.19
PKNOX2-202ENST00000526955 NPM2Q86SE8 214 aaKnown RBP13.89□□□□□ -0.19
PKNOX2-202ENST00000526955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
PKNOX2-202ENST00000526955 NOP58Q9Y2X3 529 aaKnown RBP13.89□□□□□ -0.19
PKNOX2-202ENST00000526955 MRS2Q9HD23 443 aa13.88□□□□□ -0.19
PKNOX2-202ENST00000526955 PLEKHD1A6NEE1 506 aa13.88□□□□□ -0.19
PKNOX2-202ENST00000526955 FAM9BQ8IZU0 186 aa13.87□□□□□ -0.19
PKNOX2-202ENST00000526955 HAP1P54257 671 aaPredicted RBP13.87□□□□□ -0.19
PKNOX2-202ENST00000526955 DEKP35659 375 aaKnown RBP13.87□□□□□ -0.19
PKNOX2-202ENST00000526955 PHLDB1Q86UU1 1377 aa13.85□□□□□ -0.19
PKNOX2-202ENST00000526955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.84□□□□□ -0.19
PKNOX2-202ENST00000526955 CCDC136Q96JN2 1154 aa13.83□□□□□ -0.19
PKNOX2-202ENST00000526955 BICRAQ9NZM4 1560 aa13.83□□□□□ -0.2
PKNOX2-202ENST00000526955 NBR1Q14596 966 aa13.82□□□□□ -0.2
PKNOX2-202ENST00000526955 CCDC18Q5T9S5 1454 aa13.81□□□□□ -0.2
PKNOX2-202ENST00000526955 CUX1P39880 1505 aa13.81□□□□□ -0.2
PKNOX2-202ENST00000526955 UACAQ9BZF9 1416 aa13.8□□□□□ -0.2
PKNOX2-202ENST00000526955 HSPA5P11021 654 aaKnown RBP13.79□□□□□ -0.2
PKNOX2-202ENST00000526955 FMN1Q68DA7 1419 aa13.79□□□□□ -0.2
PKNOX2-202ENST00000526955 MSH5O43196 834 aa13.79□□□□□ -0.2
PKNOX2-202ENST00000526955 IGF1RP08069 1367 aa13.79□□□□□ -0.2
PKNOX2-202ENST00000526955 B4GALNT3Q6L9W6 998 aa13.79□□□□□ -0.2
PKNOX2-202ENST00000526955 CANXP27824 592 aaKnown RBP13.78□□□□□ -0.2
PKNOX2-202ENST00000526955 ZBED9Q6R2W3 1325 aa13.77□□□□□ -0.21
PKNOX2-202ENST00000526955 FYCO1Q9BQS8 1478 aa13.76□□□□□ -0.21
PKNOX2-202ENST00000526955 FGD6Q6ZV73 1430 aa13.75□□□□□ -0.21
PKNOX2-202ENST00000526955 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
PKNOX2-202ENST00000526955 NCAPD3P42695 1498 aa13.73□□□□□ -0.21
PKNOX2-202ENST00000526955 CASKIN1Q8WXD9 1431 aa13.73□□□□□ -0.21
PKNOX2-202ENST00000526955 CNTLNQ9NXG0 1405 aa13.73□□□□□ -0.21
PKNOX2-202ENST00000526955 CFTRP13569 1480 aa13.72□□□□□ -0.21
PKNOX2-202ENST00000526955 EFCAB5A4FU69 1503 aa13.72□□□□□ -0.21
PKNOX2-202ENST00000526955 FHOD3Q2V2M9 1422 aa13.72□□□□□ -0.21
PKNOX2-202ENST00000526955 HFM1A2PYH4 1435 aa13.71□□□□□ -0.21
PKNOX2-202ENST00000526955 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
PKNOX2-202ENST00000526955 IPO9Q96P70 1041 aaKnown RBP13.7□□□□□ -0.22
PKNOX2-202ENST00000526955 CHIC2Q9UKJ5 165 aa13.7□□□□□ -0.22
PKNOX2-202ENST00000526955 RRP7BPQ9NSQ0 103 aa13.7□□□□□ -0.22
PKNOX2-202ENST00000526955 PRKRIP1Q9H875 184 aaPredicted RBP13.69□□□□□ -0.22
PKNOX2-202ENST00000526955 CFAP43Q8NDM7 1665 aa13.69□□□□□ -0.22
PKNOX2-202ENST00000526955 AQRO60306 1485 aaKnown RBP eCLIP13.68□□□□□ -0.22
PKNOX2-202ENST00000526955 FGD5Q6ZNL6 1462 aa13.68□□□□□ -0.22
PKNOX2-202ENST00000526955 ZBTB7CA1YPR0 619 aa13.68□□□□□ -0.22
PKNOX2-202ENST00000526955 PCF11O94913 1555 aaKnown RBP13.67□□□□□ -0.22
PKNOX2-202ENST00000526955 PPM1GO15355 546 aaPredicted RBP13.67□□□□□ -0.22
PKNOX2-202ENST00000526955 AEBP2Q6ZN18 517 aaPredicted RBP13.67□□□□□ -0.22
PKNOX2-202ENST00000526955 TMC1Q8TDI8 760 aa13.67□□□□□ -0.22
PKNOX2-202ENST00000526955 NUDCQ9Y266 331 aa13.66□□□□□ -0.22
PKNOX2-202ENST00000526955 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms