RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 RUSC2Q8N2Y8 1516 aa19.27■□□□□ 0.68
AMBRA1-204ENST00000526545 CUL7Q14999 1698 aa19.27■□□□□ 0.67
AMBRA1-204ENST00000526545 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
AMBRA1-204ENST00000526545 CARMIL1Q5VZK9 1371 aa19.19■□□□□ 0.66
AMBRA1-204ENST00000526545 NPM1P06748 294 aaKnown RBP eCLIP19.16■□□□□ 0.66
AMBRA1-204ENST00000526545 CARMIL2Q6F5E8 1435 aa19.08■□□□□ 0.64
AMBRA1-204ENST00000526545 MAPKBP1O60336 1514 aa19.07■□□□□ 0.64
AMBRA1-204ENST00000526545 ADCY10Q96PN6 1610 aa19.06■□□□□ 0.64
AMBRA1-204ENST00000526545 PTPRGP23470 1445 aa19.06■□□□□ 0.64
AMBRA1-204ENST00000526545 ABCC10Q5T3U5 1492 aa19.05■□□□□ 0.64
AMBRA1-204ENST00000526545 KIF13AQ9H1H9 1805 aa19.04■□□□□ 0.64
AMBRA1-204ENST00000526545 IQGAP2Q13576 1575 aa19.03■□□□□ 0.64
AMBRA1-204ENST00000526545 FAM69CQ0P6D2 419 aa19.03■□□□□ 0.64
AMBRA1-204ENST00000526545 TNIKQ9UKE5 1360 aa19.03■□□□□ 0.64
AMBRA1-204ENST00000526545 RAPGEF2Q9Y4G8 1499 aa19.03■□□□□ 0.64
AMBRA1-204ENST00000526545 AEBP2Q6ZN18 517 aaPredicted RBP18.96■□□□□ 0.63
AMBRA1-204ENST00000526545 DIP2BQ9P265 1576 aa18.96■□□□□ 0.63
AMBRA1-204ENST00000526545 TTBK1Q5TCY1 1321 aaPredicted RBP18.94■□□□□ 0.62
AMBRA1-204ENST00000526545 ABCC2Q92887 1545 aa18.94■□□□□ 0.62
AMBRA1-204ENST00000526545 DISP1Q96F81 1524 aa18.94■□□□□ 0.62
AMBRA1-204ENST00000526545 UGGT2Q9NYU1 1516 aa18.93■□□□□ 0.62
AMBRA1-204ENST00000526545 UHRF1BP1LA0JNW5 1464 aa18.92■□□□□ 0.62
AMBRA1-204ENST00000526545 UACAQ9BZF9 1416 aa18.91■□□□□ 0.62
AMBRA1-204ENST00000526545 PLB1Q6P1J6 1458 aa18.87■□□□□ 0.61
AMBRA1-204ENST00000526545 ASXL2Q76L83 1435 aa18.85■□□□□ 0.61
AMBRA1-204ENST00000526545 KIAA0556O60303 1618 aa18.84■□□□□ 0.61
AMBRA1-204ENST00000526545 PRXQ9BXM0 1461 aa18.84■□□□□ 0.61
AMBRA1-204ENST00000526545 KDM5BQ9UGL1 1544 aa18.82■□□□□ 0.6
AMBRA1-204ENST00000526545 GOLGA3Q08378 1498 aa18.82■□□□□ 0.6
AMBRA1-204ENST00000526545 CTTNBP2Q8WZ74 1663 aa18.81■□□□□ 0.6
AMBRA1-204ENST00000526545 GLI2P10070 1586 aa18.81■□□□□ 0.6
AMBRA1-204ENST00000526545 KDM6BO15054 1643 aa18.79■□□□□ 0.6
AMBRA1-204ENST00000526545 TSPOAP1O95153 1857 aa18.76■□□□□ 0.59
AMBRA1-204ENST00000526545 FAM9AQ8IZU1 332 aaPredicted RBP18.74■□□□□ 0.59
AMBRA1-204ENST00000526545 ZCCHC11Q5TAX3 1644 aaKnown RBP18.74■□□□□ 0.59
AMBRA1-204ENST00000526545 EPRSP07814 1512 aaKnown RBP18.74■□□□□ 0.59
AMBRA1-204ENST00000526545 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
AMBRA1-204ENST00000526545 EEA1Q15075 1411 aa18.68■□□□□ 0.58
AMBRA1-204ENST00000526545 WDR7Q9Y4E6 1490 aa18.68■□□□□ 0.58
AMBRA1-204ENST00000526545 PPRC1Q5VV67 1664 aaKnown RBP18.68■□□□□ 0.58
AMBRA1-204ENST00000526545 ABCA8O94911 1581 aa18.68■□□□□ 0.58
AMBRA1-204ENST00000526545 MAP3K4Q9Y6R4 1608 aa18.67■□□□□ 0.58
AMBRA1-204ENST00000526545 TEX14Q8IWB6 1497 aa18.67■□□□□ 0.58
AMBRA1-204ENST00000526545 KDM4FA0A1W2PPD8 638 aa18.59■□□□□ 0.57
AMBRA1-204ENST00000526545 P3H3Q8IVL6 736 aa18.59■□□□□ 0.57
AMBRA1-204ENST00000526545 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
AMBRA1-204ENST00000526545 COL17A1Q9UMD9 1497 aaPredicted RBP18.58■□□□□ 0.56
AMBRA1-204ENST00000526545 CD109Q6YHK3 1445 aa18.57■□□□□ 0.56
AMBRA1-204ENST00000526545 SAMD9Q5K651 1589 aa18.56■□□□□ 0.56
AMBRA1-204ENST00000526545 MAGI3Q5TCQ9 1506 aa18.56■□□□□ 0.56
AMBRA1-204ENST00000526545 CFAP43Q8NDM7 1665 aa18.55■□□□□ 0.56
AMBRA1-204ENST00000526545 ATP10BO94823 1461 aa18.54■□□□□ 0.56
AMBRA1-204ENST00000526545 RAPGEF6Q8TEU7 1601 aa18.49■□□□□ 0.55
AMBRA1-204ENST00000526545 ARID3CA6NKF2 412 aa18.48■□□□□ 0.55
AMBRA1-204ENST00000526545 KIF21BO75037 1637 aa18.47■□□□□ 0.55
AMBRA1-204ENST00000526545 PHLDB1Q86UU1 1377 aa18.45■□□□□ 0.54
AMBRA1-204ENST00000526545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.45■□□□□ 0.54
AMBRA1-204ENST00000526545 RANGAP1P46060 587 aaPredicted RBP18.45■□□□□ 0.54
AMBRA1-204ENST00000526545 HNRNPUL2Q1KMD3 747 aaKnown RBP18.45■□□□□ 0.54
AMBRA1-204ENST00000526545 ADGRL1O94910 1474 aa18.45■□□□□ 0.54
AMBRA1-204ENST00000526545 ABCA9Q8IUA7 1624 aa18.43■□□□□ 0.54
AMBRA1-204ENST00000526545 EFCAB5A4FU69 1503 aa18.43■□□□□ 0.54
AMBRA1-204ENST00000526545 ARAP3Q8WWN8 1544 aa18.43■□□□□ 0.54
AMBRA1-204ENST00000526545 FHOD3Q2V2M9 1422 aa18.42■□□□□ 0.54
AMBRA1-204ENST00000526545 NUP153P49790 1475 aaKnown RBP18.42■□□□□ 0.54
AMBRA1-204ENST00000526545 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
AMBRA1-204ENST00000526545 PLEKHD1A6NEE1 506 aa18.39■□□□□ 0.53
AMBRA1-204ENST00000526545 UBTFP17480 764 aaKnown RBP18.36■□□□□ 0.53
AMBRA1-204ENST00000526545 NEO1Q92859 1461 aa18.36■□□□□ 0.53
AMBRA1-204ENST00000526545 RAPGEF3O95398 923 aa18.29■□□□□ 0.52
AMBRA1-204ENST00000526545 FMN1Q68DA7 1419 aa18.29■□□□□ 0.52
AMBRA1-204ENST00000526545 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
AMBRA1-204ENST00000526545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.24■□□□□ 0.51
AMBRA1-204ENST00000526545 ARHGAP35Q9NRY4 1499 aa18.24■□□□□ 0.51
AMBRA1-204ENST00000526545 CFAP74Q9C0B2 1584 aa18.23■□□□□ 0.51
AMBRA1-204ENST00000526545 FANCAO15360 1455 aa18.23■□□□□ 0.51
AMBRA1-204ENST00000526545 CDK11AQ9UQ88 783 aaPredicted RBP18.23■□□□□ 0.51
AMBRA1-204ENST00000526545 AKNAQ7Z591 1439 aa18.23■□□□□ 0.51
AMBRA1-204ENST00000526545 DENND4BO75064 1496 aaPredicted RBP18.21■□□□□ 0.51
AMBRA1-204ENST00000526545 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
AMBRA1-204ENST00000526545 CDK13Q14004 1512 aaKnown RBP18.21■□□□□ 0.51
AMBRA1-204ENST00000526545 HECW1Q76N89 1606 aa18.2■□□□□ 0.5
AMBRA1-204ENST00000526545 FRMPD1Q5SYB0 1578 aa18.2■□□□□ 0.5
AMBRA1-204ENST00000526545 TTC37Q6PGP7 1564 aa18.18■□□□□ 0.5
AMBRA1-204ENST00000526545 PLCH2O75038 1416 aa18.17■□□□□ 0.5
AMBRA1-204ENST00000526545 HECW2Q9P2P5 1572 aa18.16■□□□□ 0.5
AMBRA1-204ENST00000526545 RICTORQ6R327 1708 aa18.15■□□□□ 0.5
AMBRA1-204ENST00000526545 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
AMBRA1-204ENST00000526545 ADAMTSL3P82987 1691 aa18.13■□□□□ 0.49
AMBRA1-204ENST00000526545 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
AMBRA1-204ENST00000526545 MAGI2Q86UL8 1455 aa18.13■□□□□ 0.49
AMBRA1-204ENST00000526545 ZMYM4Q5VZL5 1548 aa18.12■□□□□ 0.49
AMBRA1-204ENST00000526545 ARHGEF40Q8TER5 1519 aa18.12■□□□□ 0.49
AMBRA1-204ENST00000526545 CLIP1P30622 1438 aa18.11■□□□□ 0.49
AMBRA1-204ENST00000526545 TROQ12816 1431 aaPredicted RBP18.11■□□□□ 0.49
AMBRA1-204ENST00000526545 PTPRMP28827 1452 aa18.11■□□□□ 0.49
AMBRA1-204ENST00000526545 BCORL1Q5H9F3 1711 aa18.1■□□□□ 0.49
AMBRA1-204ENST00000526545 SCAPERQ9BY12 1400 aa18.1■□□□□ 0.49
AMBRA1-204ENST00000526545 KIF14Q15058 1648 aa18.08■□□□□ 0.48
AMBRA1-204ENST00000526545 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms