RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
HIF3A-210ENST00000526506 RAPGEF2Q9Y4G8 1499 aa25.33■■□□□ 1.65
HIF3A-210ENST00000526506 JPH4Q96JJ6 628 aa25.3■■□□□ 1.64
HIF3A-210ENST00000526506 ERCC6L2Q5T890 1561 aa25.29■■□□□ 1.64
HIF3A-210ENST00000526506 PRG4Q92954 1404 aaPredicted RBP25.27■■□□□ 1.64
HIF3A-210ENST00000526506 EEA1Q15075 1411 aa25.25■■□□□ 1.63
HIF3A-210ENST00000526506 PRXQ9BXM0 1461 aa25.23■■□□□ 1.63
HIF3A-210ENST00000526506 CSRNP3Q8WYN3 585 aa25.21■■□□□ 1.63
HIF3A-210ENST00000526506 IQGAP2Q13576 1575 aa25.18■■□□□ 1.62
HIF3A-210ENST00000526506 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
HIF3A-210ENST00000526506 CARMIL2Q6F5E8 1435 aa25.07■■□□□ 1.6
HIF3A-210ENST00000526506 CTTNBP2Q8WZ74 1663 aa25.06■■□□□ 1.6
HIF3A-210ENST00000526506 UGGT2Q9NYU1 1516 aa25.04■■□□□ 1.6
HIF3A-210ENST00000526506 DISP1Q96F81 1524 aa25■■□□□ 1.59
HIF3A-210ENST00000526506 TNIKQ9UKE5 1360 aa24.98■■□□□ 1.59
HIF3A-210ENST00000526506 PTPRGP23470 1445 aa24.97■■□□□ 1.59
HIF3A-210ENST00000526506 KIF21BO75037 1637 aa24.97■■□□□ 1.59
HIF3A-210ENST00000526506 KIAA0556O60303 1618 aa24.94■■□□□ 1.58
HIF3A-210ENST00000526506 TTBK1Q5TCY1 1321 aaPredicted RBP24.91■■□□□ 1.58
HIF3A-210ENST00000526506 GOLGA3Q08378 1498 aa24.91■■□□□ 1.58
HIF3A-210ENST00000526506 TRHP20396 242 aaPredicted RBP24.87■■□□□ 1.57
HIF3A-210ENST00000526506 ADCY10Q96PN6 1610 aa24.86■■□□□ 1.57
HIF3A-210ENST00000526506 NPM1P06748 294 aaKnown RBP eCLIP24.83■■□□□ 1.57
HIF3A-210ENST00000526506 UACAQ9BZF9 1416 aa24.79■■□□□ 1.56
HIF3A-210ENST00000526506 EHMT2Q96KQ7 1210 aa24.78■■□□□ 1.56
HIF3A-210ENST00000526506 UHRF1BP1LA0JNW5 1464 aa24.77■■□□□ 1.56
HIF3A-210ENST00000526506 UBTFP17480 764 aaKnown RBP24.77■■□□□ 1.56
HIF3A-210ENST00000526506 ABCC2Q92887 1545 aa24.76■■□□□ 1.55
HIF3A-210ENST00000526506 SAMD9Q5K651 1589 aa24.76■■□□□ 1.55
HIF3A-210ENST00000526506 MAPKBP1O60336 1514 aa24.73■■□□□ 1.55
HIF3A-210ENST00000526506 P3H3Q8IVL6 736 aa24.73■■□□□ 1.55
HIF3A-210ENST00000526506 RANGAP1P46060 587 aaPredicted RBP24.72■■□□□ 1.55
HIF3A-210ENST00000526506 PLB1Q6P1J6 1458 aa24.7■■□□□ 1.54
HIF3A-210ENST00000526506 EFCAB5A4FU69 1503 aa24.66■■□□□ 1.54
HIF3A-210ENST00000526506 ABCA8O94911 1581 aa24.66■■□□□ 1.54
HIF3A-210ENST00000526506 KDM5BQ9UGL1 1544 aa24.66■■□□□ 1.54
HIF3A-210ENST00000526506 FHOD3Q2V2M9 1422 aa24.62■■□□□ 1.53
HIF3A-210ENST00000526506 ABCC10Q5T3U5 1492 aa24.62■■□□□ 1.53
HIF3A-210ENST00000526506 ASXL2Q76L83 1435 aa24.59■■□□□ 1.53
HIF3A-210ENST00000526506 ZCCHC11Q5TAX3 1644 aaKnown RBP24.58■■□□□ 1.53
HIF3A-210ENST00000526506 KIF13AQ9H1H9 1805 aa24.57■■□□□ 1.52
HIF3A-210ENST00000526506 FAM69CQ0P6D2 419 aa24.57■■□□□ 1.52
HIF3A-210ENST00000526506 DIP2BQ9P265 1576 aa24.57■■□□□ 1.52
HIF3A-210ENST00000526506 RAPGEF6Q8TEU7 1601 aa24.53■■□□□ 1.52
HIF3A-210ENST00000526506 ARHGAP35Q9NRY4 1499 aa24.52■■□□□ 1.52
HIF3A-210ENST00000526506 WDR7Q9Y4E6 1490 aa24.47■■□□□ 1.51
HIF3A-210ENST00000526506 ARID3CA6NKF2 412 aa24.46■■□□□ 1.51
HIF3A-210ENST00000526506 ATP10BO94823 1461 aa24.45■■□□□ 1.51
HIF3A-210ENST00000526506 NUP153P49790 1475 aaKnown RBP24.45■■□□□ 1.51
HIF3A-210ENST00000526506 FMN1Q68DA7 1419 aa24.44■■□□□ 1.5
HIF3A-210ENST00000526506 GLI2P10070 1586 aa24.44■■□□□ 1.5
HIF3A-210ENST00000526506 EPRSP07814 1512 aaKnown RBP24.44■■□□□ 1.5
HIF3A-210ENST00000526506 CLIP1P30622 1438 aa24.39■■□□□ 1.5
HIF3A-210ENST00000526506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.38■■□□□ 1.49
HIF3A-210ENST00000526506 HNRNPUL2Q1KMD3 747 aaKnown RBP24.38■■□□□ 1.49
HIF3A-210ENST00000526506 KCNH8Q96L42 1107 aa24.33■■□□□ 1.49
HIF3A-210ENST00000526506 HECW1Q76N89 1606 aa24.32■■□□□ 1.48
HIF3A-210ENST00000526506 AEBP2Q6ZN18 517 aaPredicted RBP24.32■■□□□ 1.48
HIF3A-210ENST00000526506 TSPOAP1O95153 1857 aa24.32■■□□□ 1.48
HIF3A-210ENST00000526506 MAP3K4Q9Y6R4 1608 aa24.32■■□□□ 1.48
HIF3A-210ENST00000526506 ATP1B4Q9UN42 357 aaPredicted RBP24.3■■□□□ 1.48
HIF3A-210ENST00000526506 LOC105371045A0A1W2PR82 267 aa24.28■■□□□ 1.48
HIF3A-210ENST00000526506 CDK13Q14004 1512 aaKnown RBP24.27■■□□□ 1.48
HIF3A-210ENST00000526506 CEP162Q5TB80 1403 aa24.27■■□□□ 1.48
HIF3A-210ENST00000526506 PLEKHD1A6NEE1 506 aa24.26■■□□□ 1.47
HIF3A-210ENST00000526506 PPRC1Q5VV67 1664 aaKnown RBP24.25■■□□□ 1.47
HIF3A-210ENST00000526506 CASKIN1Q8WXD9 1431 aa24.25■■□□□ 1.47
HIF3A-210ENST00000526506 CFAP43Q8NDM7 1665 aa24.24■■□□□ 1.47
HIF3A-210ENST00000526506 CD109Q6YHK3 1445 aa24.24■■□□□ 1.47
HIF3A-210ENST00000526506 TEX14Q8IWB6 1497 aa24.24■■□□□ 1.47
HIF3A-210ENST00000526506 PCF11O94913 1555 aaKnown RBP24.23■■□□□ 1.47
HIF3A-210ENST00000526506 ABCA9Q8IUA7 1624 aa24.2■■□□□ 1.46
HIF3A-210ENST00000526506 MAGI3Q5TCQ9 1506 aa24.2■■□□□ 1.46
HIF3A-210ENST00000526506 KDM6BO15054 1643 aa24.19■■□□□ 1.46
HIF3A-210ENST00000526506 FYCO1Q9BQS8 1478 aa24.19■■□□□ 1.46
HIF3A-210ENST00000526506 CDK11AQ9UQ88 783 aaPredicted RBP24.17■■□□□ 1.46
HIF3A-210ENST00000526506 CCDC18Q5T9S5 1454 aa24.16■■□□□ 1.46
HIF3A-210ENST00000526506 LRRIQ1Q96JM4 1722 aa24.14■■□□□ 1.45
HIF3A-210ENST00000526506 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.09■■□□□ 1.45
HIF3A-210ENST00000526506 TROQ12816 1431 aaPredicted RBP24.09■■□□□ 1.45
HIF3A-210ENST00000526506 COL17A1Q9UMD9 1497 aaPredicted RBP24.06■■□□□ 1.44
HIF3A-210ENST00000526506 TTC37Q6PGP7 1564 aa24.05■■□□□ 1.44
HIF3A-210ENST00000526506 KIF14Q15058 1648 aa24.03■■□□□ 1.44
HIF3A-210ENST00000526506 NEO1Q92859 1461 aa24.02■■□□□ 1.44
HIF3A-210ENST00000526506 PHLDB1Q86UU1 1377 aa24.02■■□□□ 1.44
HIF3A-210ENST00000526506 ARAP3Q8WWN8 1544 aa23.99■■□□□ 1.43
HIF3A-210ENST00000526506 VPS8Q8N3P4 1428 aa23.98■■□□□ 1.43
HIF3A-210ENST00000526506 FANCAO15360 1455 aa23.97■■□□□ 1.43
HIF3A-210ENST00000526506 PLCH2O75038 1416 aa23.96■■□□□ 1.43
HIF3A-210ENST00000526506 CFAP74Q9C0B2 1584 aa23.95■■□□□ 1.42
HIF3A-210ENST00000526506 MYO5CQ9NQX4 1742 aa23.93■■□□□ 1.42
HIF3A-210ENST00000526506 AKNAQ7Z591 1439 aa23.91■■□□□ 1.42
HIF3A-210ENST00000526506 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
HIF3A-210ENST00000526506 EFCAB2Q5VUJ9 269 aa23.87■■□□□ 1.41
HIF3A-210ENST00000526506 ARHGAP5Q13017 1502 aa23.85■■□□□ 1.41
HIF3A-210ENST00000526506 EHBP1L1Q8N3D4 1523 aa23.85■■□□□ 1.41
HIF3A-210ENST00000526506 RAPGEF3O95398 923 aa23.85■■□□□ 1.41
HIF3A-210ENST00000526506 DENND4BO75064 1496 aaPredicted RBP23.85■■□□□ 1.41
HIF3A-210ENST00000526506 TIAM1Q13009 1591 aa23.83■■□□□ 1.41
HIF3A-210ENST00000526506 ADGRL1O94910 1474 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms