RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 ADCY10Q96PN6 1610 aa20.75■□□□□ 0.91
CAPN1-204ENST00000526468 TSPOAP1O95153 1857 aa20.71■□□□□ 0.91
CAPN1-204ENST00000526468 DIP2BQ9P265 1576 aa20.7■□□□□ 0.9
CAPN1-204ENST00000526468 KIF27Q86VH2 1401 aa20.69■□□□□ 0.9
CAPN1-204ENST00000526468 MAPKBP1O60336 1514 aa20.68■□□□□ 0.9
CAPN1-204ENST00000526468 KIAA0586Q9BVV6 1533 aa20.65■□□□□ 0.9
CAPN1-204ENST00000526468 JPH4Q96JJ6 628 aa20.65■□□□□ 0.9
CAPN1-204ENST00000526468 AEBP2Q6ZN18 517 aaPredicted RBP20.64■□□□□ 0.89
CAPN1-204ENST00000526468 ABCC10Q5T3U5 1492 aa20.6■□□□□ 0.89
CAPN1-204ENST00000526468 IQGAP2Q13576 1575 aa20.59■□□□□ 0.89
CAPN1-204ENST00000526468 IGF1RP08069 1367 aa20.57■□□□□ 0.88
CAPN1-204ENST00000526468 KDM6BO15054 1643 aa20.56■□□□□ 0.88
CAPN1-204ENST00000526468 CTTNBP2Q8WZ74 1663 aa20.52■□□□□ 0.88
CAPN1-204ENST00000526468 NPM1P06748 294 aaKnown RBP eCLIP20.51■□□□□ 0.87
CAPN1-204ENST00000526468 CARMIL1Q5VZK9 1371 aa20.48■□□□□ 0.87
CAPN1-204ENST00000526468 FAM69CQ0P6D2 419 aa20.48■□□□□ 0.87
CAPN1-204ENST00000526468 CARMIL2Q6F5E8 1435 aa20.45■□□□□ 0.86
CAPN1-204ENST00000526468 PPRC1Q5VV67 1664 aaKnown RBP20.45■□□□□ 0.86
CAPN1-204ENST00000526468 ABCC2Q92887 1545 aa20.43■□□□□ 0.86
CAPN1-204ENST00000526468 PTPRGP23470 1445 aa20.43■□□□□ 0.86
CAPN1-204ENST00000526468 KIAA0556O60303 1618 aa20.42■□□□□ 0.86
CAPN1-204ENST00000526468 TTBK1Q5TCY1 1321 aaPredicted RBP20.41■□□□□ 0.86
CAPN1-204ENST00000526468 TNIKQ9UKE5 1360 aa20.41■□□□□ 0.86
CAPN1-204ENST00000526468 ZCCHC11Q5TAX3 1644 aaKnown RBP20.41■□□□□ 0.86
CAPN1-204ENST00000526468 DISP1Q96F81 1524 aa20.39■□□□□ 0.85
CAPN1-204ENST00000526468 UGGT2Q9NYU1 1516 aa20.37■□□□□ 0.85
CAPN1-204ENST00000526468 RAPGEF2Q9Y4G8 1499 aa20.37■□□□□ 0.85
CAPN1-204ENST00000526468 GLI2P10070 1586 aa20.36■□□□□ 0.85
CAPN1-204ENST00000526468 UHRF1BP1LA0JNW5 1464 aa20.35■□□□□ 0.85
CAPN1-204ENST00000526468 ASXL2Q76L83 1435 aa20.35■□□□□ 0.85
CAPN1-204ENST00000526468 MAP3K4Q9Y6R4 1608 aa20.35■□□□□ 0.85
CAPN1-204ENST00000526468 PLB1Q6P1J6 1458 aa20.33■□□□□ 0.85
CAPN1-204ENST00000526468 UACAQ9BZF9 1416 aa20.31■□□□□ 0.84
CAPN1-204ENST00000526468 KDM5BQ9UGL1 1544 aa20.27■□□□□ 0.84
CAPN1-204ENST00000526468 EPRSP07814 1512 aaKnown RBP20.24■□□□□ 0.83
CAPN1-204ENST00000526468 CFAP43Q8NDM7 1665 aa20.22■□□□□ 0.83
CAPN1-204ENST00000526468 TEX14Q8IWB6 1497 aa20.19■□□□□ 0.82
CAPN1-204ENST00000526468 GOLGA3Q08378 1498 aa20.18■□□□□ 0.82
CAPN1-204ENST00000526468 WDR7Q9Y4E6 1490 aa20.18■□□□□ 0.82
CAPN1-204ENST00000526468 ABCA8O94911 1581 aa20.17■□□□□ 0.82
CAPN1-204ENST00000526468 ADGRL1O94910 1474 aa20.13■□□□□ 0.81
CAPN1-204ENST00000526468 PRXQ9BXM0 1461 aa20.11■□□□□ 0.81
CAPN1-204ENST00000526468 KDM4FA0A1W2PPD8 638 aa20.1■□□□□ 0.81
CAPN1-204ENST00000526468 COL17A1Q9UMD9 1497 aaPredicted RBP20.07■□□□□ 0.8
CAPN1-204ENST00000526468 SAMD9Q5K651 1589 aa20.06■□□□□ 0.8
CAPN1-204ENST00000526468 KIF21BO75037 1637 aa20.05■□□□□ 0.8
CAPN1-204ENST00000526468 RAPGEF6Q8TEU7 1601 aa20.02■□□□□ 0.79
CAPN1-204ENST00000526468 MAGI3Q5TCQ9 1506 aa20.02■□□□□ 0.79
CAPN1-204ENST00000526468 CD109Q6YHK3 1445 aa19.98■□□□□ 0.79
CAPN1-204ENST00000526468 ABCA9Q8IUA7 1624 aa19.98■□□□□ 0.79
CAPN1-204ENST00000526468 HECW2Q9P2P5 1572 aa19.95■□□□□ 0.78
CAPN1-204ENST00000526468 KCNH8Q96L42 1107 aa19.91■□□□□ 0.78
CAPN1-204ENST00000526468 ARID3CA6NKF2 412 aa19.89■□□□□ 0.77
CAPN1-204ENST00000526468 ATP10BO94823 1461 aa19.87■□□□□ 0.77
CAPN1-204ENST00000526468 P3H3Q8IVL6 736 aa19.86■□□□□ 0.77
CAPN1-204ENST00000526468 ARAP3Q8WWN8 1544 aa19.86■□□□□ 0.77
CAPN1-204ENST00000526468 FRMPD1Q5SYB0 1578 aa19.84■□□□□ 0.77
CAPN1-204ENST00000526468 FAM9AQ8IZU1 332 aaPredicted RBP19.84■□□□□ 0.77
CAPN1-204ENST00000526468 EEA1Q15075 1411 aa19.84■□□□□ 0.77
CAPN1-204ENST00000526468 CFAP74Q9C0B2 1584 aa19.83■□□□□ 0.76
CAPN1-204ENST00000526468 NUP153P49790 1475 aaKnown RBP19.82■□□□□ 0.76
CAPN1-204ENST00000526468 EFCAB5A4FU69 1503 aa19.81■□□□□ 0.76
CAPN1-204ENST00000526468 FHOD3Q2V2M9 1422 aa19.81■□□□□ 0.76
CAPN1-204ENST00000526468 RICTORQ6R327 1708 aa19.8■□□□□ 0.76
CAPN1-204ENST00000526468 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
CAPN1-204ENST00000526468 ADAMTSL3P82987 1691 aa19.78■□□□□ 0.76
CAPN1-204ENST00000526468 BCORL1Q5H9F3 1711 aa19.78■□□□□ 0.76
CAPN1-204ENST00000526468 NEO1Q92859 1461 aa19.78■□□□□ 0.76
CAPN1-204ENST00000526468 ARHGEF40Q8TER5 1519 aa19.77■□□□□ 0.76
CAPN1-204ENST00000526468 TTC37Q6PGP7 1564 aa19.77■□□□□ 0.76
CAPN1-204ENST00000526468 MADDQ8WXG6 1647 aa19.74■□□□□ 0.75
CAPN1-204ENST00000526468 RANGAP1P46060 587 aaPredicted RBP19.74■□□□□ 0.75
CAPN1-204ENST00000526468 RIMS1Q86UR5 1692 aaKnown RBP19.72■□□□□ 0.75
CAPN1-204ENST00000526468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.72■□□□□ 0.75
CAPN1-204ENST00000526468 HNRNPUL2Q1KMD3 747 aaKnown RBP19.72■□□□□ 0.75
CAPN1-204ENST00000526468 PHLDB1Q86UU1 1377 aa19.71■□□□□ 0.75
CAPN1-204ENST00000526468 MYO5CQ9NQX4 1742 aa19.71■□□□□ 0.75
CAPN1-204ENST00000526468 HECW1Q76N89 1606 aa19.69■□□□□ 0.74
CAPN1-204ENST00000526468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.69■□□□□ 0.74
CAPN1-204ENST00000526468 CDK13Q14004 1512 aaKnown RBP19.68■□□□□ 0.74
CAPN1-204ENST00000526468 FER1L4A9Z1Z3 1794 aa19.66■□□□□ 0.74
CAPN1-204ENST00000526468 PTPRMP28827 1452 aa19.65■□□□□ 0.74
CAPN1-204ENST00000526468 ZMYM4Q5VZL5 1548 aa19.65■□□□□ 0.74
CAPN1-204ENST00000526468 LRRIQ1Q96JM4 1722 aa19.65■□□□□ 0.74
CAPN1-204ENST00000526468 SIGLEC1Q9BZZ2 1709 aa19.65■□□□□ 0.74
CAPN1-204ENST00000526468 FANCAO15360 1455 aa19.64■□□□□ 0.73
CAPN1-204ENST00000526468 RAPGEF3O95398 923 aa19.63■□□□□ 0.73
CAPN1-204ENST00000526468 ZFYVE16Q7Z3T8 1539 aa19.61■□□□□ 0.73
CAPN1-204ENST00000526468 DENND4BO75064 1496 aaPredicted RBP19.61■□□□□ 0.73
CAPN1-204ENST00000526468 ILDR1Q86SU0 546 aaPredicted RBP19.61■□□□□ 0.73
CAPN1-204ENST00000526468 KIF14Q15058 1648 aa19.59■□□□□ 0.73
CAPN1-204ENST00000526468 PCF11O94913 1555 aaKnown RBP19.58■□□□□ 0.73
CAPN1-204ENST00000526468 AKNAQ7Z591 1439 aa19.58■□□□□ 0.72
CAPN1-204ENST00000526468 PLEKHD1A6NEE1 506 aa19.56■□□□□ 0.72
CAPN1-204ENST00000526468 ARID4BQ4LE39 1312 aaPredicted RBP19.55■□□□□ 0.72
CAPN1-204ENST00000526468 FMN1Q68DA7 1419 aa19.52■□□□□ 0.72
CAPN1-204ENST00000526468 ARHGAP35Q9NRY4 1499 aa19.52■□□□□ 0.72
CAPN1-204ENST00000526468 EHMT2Q96KQ7 1210 aa19.51■□□□□ 0.71
CAPN1-204ENST00000526468 POGZQ7Z3K3 1410 aa19.51■□□□□ 0.71
CAPN1-204ENST00000526468 LMTK3Q96Q04 1460 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms