RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 TOP2BQ02880 1626 aa12.58□□□□□ -0.39
PPFIA1-206ENST00000526262 GAPVD1Q14C86 1478 aa12.58□□□□□ -0.4
PPFIA1-206ENST00000526262 CUX1P39880 1505 aa12.58□□□□□ -0.4
PPFIA1-206ENST00000526262 TSPY4P0CV99 314 aa12.58□□□□□ -0.4
PPFIA1-206ENST00000526262 TSPY10P0CW01 314 aa12.58□□□□□ -0.4
PPFIA1-206ENST00000526262 ZNF316A6NFI3 1004 aaPredicted RBP12.57□□□□□ -0.4
PPFIA1-206ENST00000526262 FMN1Q68DA7 1419 aa12.57□□□□□ -0.4
PPFIA1-206ENST00000526262 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
PPFIA1-206ENST00000526262 ZNF326Q5BKZ1 582 aaKnown RBP12.54□□□□□ -0.4
PPFIA1-206ENST00000526262 CFDP1Q9UEE9 299 aaPredicted RBP12.54□□□□□ -0.4
PPFIA1-206ENST00000526262 CCNB3Q8WWL7 1395 aa12.54□□□□□ -0.4
PPFIA1-206ENST00000526262 TOPBP1Q92547 1522 aa12.54□□□□□ -0.4
PPFIA1-206ENST00000526262 FHOD3Q2V2M9 1422 aa12.53□□□□□ -0.4
PPFIA1-206ENST00000526262 CARMIL2Q6F5E8 1435 aa12.53□□□□□ -0.4
PPFIA1-206ENST00000526262 RRP7BPQ9NSQ0 103 aa12.53□□□□□ -0.4
PPFIA1-206ENST00000526262 AQRO60306 1485 aaKnown RBP eCLIP12.51□□□□□ -0.412e-6■■■■□ 25.1
PPFIA1-206ENST00000526262 POLA1P09884 1462 aaPredicted RBP12.51□□□□□ -0.41
PPFIA1-206ENST00000526262 JPH4Q96JJ6 628 aa12.5□□□□□ -0.41
PPFIA1-206ENST00000526262 LAMC3Q9Y6N6 1575 aa12.5□□□□□ -0.41
PPFIA1-206ENST00000526262 TONSLQ96HA7 1378 aa12.5□□□□□ -0.41
PPFIA1-206ENST00000526262 MRC2Q9UBG0 1479 aa12.49□□□□□ -0.41
PPFIA1-206ENST00000526262 KIF21BO75037 1637 aa12.48□□□□□ -0.41
PPFIA1-206ENST00000526262 PRXQ9BXM0 1461 aa12.48□□□□□ -0.41
PPFIA1-206ENST00000526262 DNMBPQ6XZF7 1577 aa12.47□□□□□ -0.41
PPFIA1-206ENST00000526262 CNGB1Q14028 1251 aaPredicted RBP12.47□□□□□ -0.41
PPFIA1-206ENST00000526262 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.41
PPFIA1-206ENST00000526262 ARHGAP35Q9NRY4 1499 aa12.45□□□□□ -0.42
PPFIA1-206ENST00000526262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.44□□□□□ -0.422e-7■■■□□ 15.2
PPFIA1-206ENST00000526262 GRIN2BQ13224 1484 aa12.43□□□□□ -0.42
PPFIA1-206ENST00000526262 SLC4A1APQ9BWU0 796 aaKnown RBP12.42□□□□□ -0.42
PPFIA1-206ENST00000526262 IFT140Q96RY7 1462 aa12.41□□□□□ -0.42
PPFIA1-206ENST00000526262 ACIN1Q9UKV3 1341 aaKnown RBP12.41□□□□□ -0.42
PPFIA1-206ENST00000526262 ABCA10Q8WWZ4 1543 aa12.39□□□□□ -0.43
PPFIA1-206ENST00000526262 NEFLP07196 543 aa12.39□□□□□ -0.43
PPFIA1-206ENST00000526262 CLSPNQ9HAW4 1339 aa12.38□□□□□ -0.43
PPFIA1-206ENST00000526262 ANP32CO43423 234 aa12.37□□□□□ -0.43
PPFIA1-206ENST00000526262 URB2Q14146 1524 aaKnown RBP12.35□□□□□ -0.43
PPFIA1-206ENST00000526262 ARAP1Q96P48 1450 aa12.35□□□□□ -0.43
PPFIA1-206ENST00000526262 SETD5Q9C0A6 1442 aa12.34□□□□□ -0.43
PPFIA1-206ENST00000526262 BIVM-ERCC5R4GMW8 1640 aa12.34□□□□□ -0.43
PPFIA1-206ENST00000526262 PTPRGP23470 1445 aa12.33□□□□□ -0.44
PPFIA1-206ENST00000526262 ESF1Q9H501 851 aaKnown RBP12.32□□□□□ -0.44
PPFIA1-206ENST00000526262 CCDC18Q5T9S5 1454 aa12.32□□□□□ -0.44
PPFIA1-206ENST00000526262 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
PPFIA1-206ENST00000526262 SIN3AQ96ST3 1273 aa12.31□□□□□ -0.44
PPFIA1-206ENST00000526262 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
PPFIA1-206ENST00000526262 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
PPFIA1-206ENST00000526262 DDX10Q13206 875 aaKnown RBP12.28□□□□□ -0.44
PPFIA1-206ENST00000526262 SNAPC4Q5SXM2 1469 aa12.28□□□□□ -0.44
PPFIA1-206ENST00000526262 CASKIN1Q8WXD9 1431 aa12.28□□□□□ -0.44
PPFIA1-206ENST00000526262 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
PPFIA1-206ENST00000526262 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
PPFIA1-206ENST00000526262 EFCAB5A4FU69 1503 aa12.25□□□□□ -0.45
PPFIA1-206ENST00000526262 HIRIP3Q9BW71 556 aaPredicted RBP12.25□□□□□ -0.45
PPFIA1-206ENST00000526262 STAG3Q9UJ98 1225 aa12.25□□□□□ -0.45
PPFIA1-206ENST00000526262 LRRC9Q6ZRR7 1453 aa12.24□□□□□ -0.45
PPFIA1-206ENST00000526262 EIF4G2P78344 907 aaKnown RBP eCLIP12.23□□□□□ -0.45
PPFIA1-206ENST00000526262 TIMELESSQ9UNS1 1208 aa12.23□□□□□ -0.45
PPFIA1-206ENST00000526262 BCANQ96GW7 911 aa12.23□□□□□ -0.45
PPFIA1-206ENST00000526262 RGL3Q3MIN7 710 aa12.22□□□□□ -0.45
PPFIA1-206ENST00000526262 FYCO1Q9BQS8 1478 aa12.22□□□□□ -0.45
PPFIA1-206ENST00000526262 PHLDB1Q86UU1 1377 aa12.22□□□□□ -0.45
PPFIA1-206ENST00000526262 HNRNPMP52272 730 aaKnown RBP eCLIP12.21□□□□□ -0.454e-11■■■■■ 33.2
PPFIA1-206ENST00000526262 CUL7Q14999 1698 aa12.21□□□□□ -0.45
PPFIA1-206ENST00000526262 ANKRD30AQ9BXX3 1397 aa12.21□□□□□ -0.46
PPFIA1-206ENST00000526262 RSPH4AQ5TD94 716 aa12.21□□□□□ -0.46
PPFIA1-206ENST00000526262 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.46
PPFIA1-206ENST00000526262 KIAA0586Q9BVV6 1533 aa12.2□□□□□ -0.46
PPFIA1-206ENST00000526262 PRG4Q92954 1404 aaPredicted RBP12.19□□□□□ -0.46
PPFIA1-206ENST00000526262 MPHOSPH9Q99550 1183 aa12.18□□□□□ -0.46
PPFIA1-206ENST00000526262 FGD6Q6ZV73 1430 aa12.18□□□□□ -0.46
PPFIA1-206ENST00000526262 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
PPFIA1-206ENST00000526262 MYOM3Q5VTT5 1437 aa12.17□□□□□ -0.46
PPFIA1-206ENST00000526262 PKD2Q13563 968 aa12.17□□□□□ -0.46
PPFIA1-206ENST00000526262 FOXD1Q16676 465 aa12.16□□□□□ -0.46
PPFIA1-206ENST00000526262 ERICH6Q7L0X2 663 aa12.16□□□□□ -0.46
PPFIA1-206ENST00000526262 SYNJ2O15056 1496 aa12.16□□□□□ -0.46
PPFIA1-206ENST00000526262 MAGI1Q96QZ7 1491 aaPredicted RBP12.16□□□□□ -0.46
PPFIA1-206ENST00000526262 MIER1Q8N108 512 aa12.15□□□□□ -0.46
PPFIA1-206ENST00000526262 PRDM2Q13029 1718 aa12.15□□□□□ -0.46
PPFIA1-206ENST00000526262 PLPPR3Q6T4P5 718 aa12.15□□□□□ -0.46
PPFIA1-206ENST00000526262 DHX57Q6P158 1386 aaKnown RBP12.15□□□□□ -0.46
PPFIA1-206ENST00000526262 NCOA2Q15596 1464 aa12.15□□□□□ -0.46
PPFIA1-206ENST00000526262 NUP155O75694 1391 aa12.15□□□□□ -0.46
PPFIA1-206ENST00000526262 GRIN2AQ12879 1464 aa12.14□□□□□ -0.47
PPFIA1-206ENST00000526262 IQGAP2Q13576 1575 aa12.14□□□□□ -0.47
PPFIA1-206ENST00000526262 ZNF644Q9H582 1327 aaPredicted RBP12.13□□□□□ -0.47
PPFIA1-206ENST00000526262 CYB5RLQ6IPT4 315 aa12.13□□□□□ -0.47
PPFIA1-206ENST00000526262 RRBP1Q9P2E9 1410 aaKnown RBP12.13□□□□□ -0.47
PPFIA1-206ENST00000526262 SPAG9O60271 1321 aaKnown RBP12.12□□□□□ -0.47
PPFIA1-206ENST00000526262 TIAM1Q13009 1591 aa12.12□□□□□ -0.47
PPFIA1-206ENST00000526262 KANK1Q14678 1352 aa12.11□□□□□ -0.47
PPFIA1-206ENST00000526262 CARD11Q9BXL7 1154 aa12.11□□□□□ -0.47
PPFIA1-206ENST00000526262 ARID4BQ4LE39 1312 aaPredicted RBP12.1□□□□□ -0.47
PPFIA1-206ENST00000526262 DCAF11Q8TEB1 546 aa12.1□□□□□ -0.47
PPFIA1-206ENST00000526262 GGT6Q6P531 493 aa12.09□□□□□ -0.47
PPFIA1-206ENST00000526262 KIF21AQ7Z4S6 1674 aa12.08□□□□□ -0.48
PPFIA1-206ENST00000526262 PPP1R15AO75807 674 aaPredicted RBP12.08□□□□□ -0.48
PPFIA1-206ENST00000526262 GTF3C3Q9Y5Q9 886 aa12.07□□□□□ -0.48
PPFIA1-206ENST00000526262 KIF3BO15066 747 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms