RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 PRG4Q92954 1404 aaPredicted RBP23.04■■□□□ 1.28
USH1C-203ENST00000526181 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
USH1C-203ENST00000526181 KIAA0586Q9BVV6 1533 aa22.98■■□□□ 1.27
USH1C-203ENST00000526181 TRHP20396 242 aaPredicted RBP22.94■■□□□ 1.26
USH1C-203ENST00000526181 RAPGEF2Q9Y4G8 1499 aa22.88■■□□□ 1.25
USH1C-203ENST00000526181 IQGAP2Q13576 1575 aa22.84■■□□□ 1.25
USH1C-203ENST00000526181 PRXQ9BXM0 1461 aa22.75■■□□□ 1.23
USH1C-203ENST00000526181 ADCY10Q96PN6 1610 aa22.75■■□□□ 1.23
USH1C-203ENST00000526181 CARMIL2Q6F5E8 1435 aa22.73■■□□□ 1.23
USH1C-203ENST00000526181 DISP1Q96F81 1524 aa22.72■■□□□ 1.23
USH1C-203ENST00000526181 TTBK1Q5TCY1 1321 aaPredicted RBP22.72■■□□□ 1.23
USH1C-203ENST00000526181 PTPRGP23470 1445 aa22.7■■□□□ 1.22
USH1C-203ENST00000526181 UGGT2Q9NYU1 1516 aa22.7■■□□□ 1.22
USH1C-203ENST00000526181 TNIKQ9UKE5 1360 aa22.69■■□□□ 1.22
USH1C-203ENST00000526181 CTTNBP2Q8WZ74 1663 aa22.68■■□□□ 1.22
USH1C-203ENST00000526181 KIAA0556O60303 1618 aa22.64■■□□□ 1.22
USH1C-203ENST00000526181 CSRNP3Q8WYN3 585 aa22.63■■□□□ 1.21
USH1C-203ENST00000526181 NPM1P06748 294 aaKnown RBP eCLIP22.62■■□□□ 1.21
USH1C-203ENST00000526181 MAPKBP1O60336 1514 aa22.62■■□□□ 1.21
USH1C-203ENST00000526181 EEA1Q15075 1411 aa22.59■■□□□ 1.21
USH1C-203ENST00000526181 FAM9AQ8IZU1 332 aaPredicted RBP22.58■■□□□ 1.21
USH1C-203ENST00000526181 KIF13AQ9H1H9 1805 aa22.58■■□□□ 1.21
USH1C-203ENST00000526181 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
USH1C-203ENST00000526181 UACAQ9BZF9 1416 aa22.55■■□□□ 1.2
USH1C-203ENST00000526181 ABCC10Q5T3U5 1492 aa22.54■■□□□ 1.2
USH1C-203ENST00000526181 ABCC2Q92887 1545 aa22.54■■□□□ 1.2
USH1C-203ENST00000526181 UHRF1BP1LA0JNW5 1464 aa22.54■■□□□ 1.2
USH1C-203ENST00000526181 DIP2BQ9P265 1576 aa22.53■■□□□ 1.2
USH1C-203ENST00000526181 GOLGA3Q08378 1498 aa22.52■■□□□ 1.2
USH1C-203ENST00000526181 FAM69CQ0P6D2 419 aa22.5■■□□□ 1.19
USH1C-203ENST00000526181 PLB1Q6P1J6 1458 aa22.47■■□□□ 1.19
USH1C-203ENST00000526181 ASXL2Q76L83 1435 aa22.44■■□□□ 1.18
USH1C-203ENST00000526181 KDM5BQ9UGL1 1544 aa22.44■■□□□ 1.18
USH1C-203ENST00000526181 KIF21BO75037 1637 aa22.43■■□□□ 1.18
USH1C-203ENST00000526181 ZCCHC11Q5TAX3 1644 aaKnown RBP22.42■■□□□ 1.18
USH1C-203ENST00000526181 P3H3Q8IVL6 736 aa22.42■■□□□ 1.18
USH1C-203ENST00000526181 ABCA8O94911 1581 aa22.4■■□□□ 1.18
USH1C-203ENST00000526181 SAMD9Q5K651 1589 aa22.4■■□□□ 1.18
USH1C-203ENST00000526181 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
USH1C-203ENST00000526181 EHMT2Q96KQ7 1210 aa22.35■■□□□ 1.17
USH1C-203ENST00000526181 GLI2P10070 1586 aa22.32■■□□□ 1.16
USH1C-203ENST00000526181 EPRSP07814 1512 aaKnown RBP22.31■■□□□ 1.16
USH1C-203ENST00000526181 TSPOAP1O95153 1857 aa22.3■■□□□ 1.16
USH1C-203ENST00000526181 FHOD3Q2V2M9 1422 aa22.28■■□□□ 1.16
USH1C-203ENST00000526181 WDR7Q9Y4E6 1490 aa22.28■■□□□ 1.16
USH1C-203ENST00000526181 ARID3CA6NKF2 412 aa22.27■■□□□ 1.16
USH1C-203ENST00000526181 PPRC1Q5VV67 1664 aaKnown RBP22.26■■□□□ 1.15
USH1C-203ENST00000526181 MAP3K4Q9Y6R4 1608 aa22.24■■□□□ 1.15
USH1C-203ENST00000526181 KDM6BO15054 1643 aa22.23■■□□□ 1.15
USH1C-203ENST00000526181 RAPGEF6Q8TEU7 1601 aa22.23■■□□□ 1.15
USH1C-203ENST00000526181 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
USH1C-203ENST00000526181 EFCAB5A4FU69 1503 aa22.21■■□□□ 1.15
USH1C-203ENST00000526181 ATP10BO94823 1461 aa22.21■■□□□ 1.15
USH1C-203ENST00000526181 NUP153P49790 1475 aaKnown RBP22.17■■□□□ 1.14
USH1C-203ENST00000526181 KCNH8Q96L42 1107 aa22.17■■□□□ 1.14
USH1C-203ENST00000526181 ARHGAP35Q9NRY4 1499 aa22.11■■□□□ 1.13
USH1C-203ENST00000526181 TEX14Q8IWB6 1497 aa22.1■■□□□ 1.13
USH1C-203ENST00000526181 CD109Q6YHK3 1445 aa22.09■■□□□ 1.13
USH1C-203ENST00000526181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.09■■□□□ 1.13
USH1C-203ENST00000526181 HNRNPUL2Q1KMD3 747 aaKnown RBP22.09■■□□□ 1.13
USH1C-203ENST00000526181 CFAP43Q8NDM7 1665 aa22.09■■□□□ 1.13
USH1C-203ENST00000526181 COL17A1Q9UMD9 1497 aaPredicted RBP22.09■■□□□ 1.13
USH1C-203ENST00000526181 MAGI3Q5TCQ9 1506 aa22.06■■□□□ 1.12
USH1C-203ENST00000526181 ABCA9Q8IUA7 1624 aa22.02■■□□□ 1.12
USH1C-203ENST00000526181 CDK13Q14004 1512 aaKnown RBP22.01■■□□□ 1.11
USH1C-203ENST00000526181 FMN1Q68DA7 1419 aa22■■□□□ 1.11
USH1C-203ENST00000526181 HECW1Q76N89 1606 aa21.96■■□□□ 1.11
USH1C-203ENST00000526181 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
USH1C-203ENST00000526181 PLEKHD1A6NEE1 506 aa21.94■■□□□ 1.1
USH1C-203ENST00000526181 ATP1B4Q9UN42 357 aaPredicted RBP21.94■■□□□ 1.1
USH1C-203ENST00000526181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.9■■□□□ 1.1
USH1C-203ENST00000526181 PCF11O94913 1555 aaKnown RBP21.88■■□□□ 1.09
USH1C-203ENST00000526181 TTC37Q6PGP7 1564 aa21.88■■□□□ 1.09
USH1C-203ENST00000526181 ARAP3Q8WWN8 1544 aa21.87■■□□□ 1.09
USH1C-203ENST00000526181 LRRIQ1Q96JM4 1722 aa21.87■■□□□ 1.09
USH1C-203ENST00000526181 CLIP1P30622 1438 aa21.87■■□□□ 1.09
USH1C-203ENST00000526181 KDM4FA0A1W2PPD8 638 aa21.85■■□□□ 1.09
USH1C-203ENST00000526181 NEO1Q92859 1461 aa21.83■■□□□ 1.09
USH1C-203ENST00000526181 CASKIN1Q8WXD9 1431 aa21.82■■□□□ 1.08
USH1C-203ENST00000526181 PHLDB1Q86UU1 1377 aa21.8■■□□□ 1.08
USH1C-203ENST00000526181 KIF14Q15058 1648 aa21.8■■□□□ 1.08
USH1C-203ENST00000526181 FRMPD1Q5SYB0 1578 aa21.78■■□□□ 1.08
USH1C-203ENST00000526181 FANCAO15360 1455 aa21.78■■□□□ 1.08
USH1C-203ENST00000526181 RAPGEF3O95398 923 aa21.78■■□□□ 1.08
USH1C-203ENST00000526181 ADGRL1O94910 1474 aa21.77■■□□□ 1.08
USH1C-203ENST00000526181 TROQ12816 1431 aaPredicted RBP21.77■■□□□ 1.08
USH1C-203ENST00000526181 CDK11AQ9UQ88 783 aaPredicted RBP21.76■■□□□ 1.07
USH1C-203ENST00000526181 FYCO1Q9BQS8 1478 aa21.76■■□□□ 1.07
USH1C-203ENST00000526181 AKNAQ7Z591 1439 aa21.75■■□□□ 1.07
USH1C-203ENST00000526181 CCDC18Q5T9S5 1454 aa21.75■■□□□ 1.07
USH1C-203ENST00000526181 CFAP74Q9C0B2 1584 aa21.74■■□□□ 1.07
USH1C-203ENST00000526181 PLCH2O75038 1416 aa21.72■■□□□ 1.07
USH1C-203ENST00000526181 CEP162Q5TB80 1403 aa21.72■■□□□ 1.07
USH1C-203ENST00000526181 DENND4BO75064 1496 aaPredicted RBP21.7■■□□□ 1.06
USH1C-203ENST00000526181 MYO5CQ9NQX4 1742 aa21.69■■□□□ 1.06
USH1C-203ENST00000526181 LOC105371045A0A1W2PR82 267 aa21.68■■□□□ 1.06
USH1C-203ENST00000526181 RICTORQ6R327 1708 aa21.68■■□□□ 1.06
USH1C-203ENST00000526181 ARHGAP5Q13017 1502 aa21.63■■□□□ 1.05
USH1C-203ENST00000526181 SCAPERQ9BY12 1400 aa21.63■■□□□ 1.05
USH1C-203ENST00000526181 ARHGEF40Q8TER5 1519 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms