RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 JPH4Q96JJ6 628 aa37.87■■■■□ 3.65
CKLF-206ENST00000526149 KIAA0586Q9BVV6 1533 aa37.83■■■■□ 3.65
CKLF-206ENST00000526149 CHIC1Q5VXU3 224 aa37.82■■■■□ 3.64
CKLF-206ENST00000526149 RAPGEF2Q9Y4G8 1499 aa37.8■■■■□ 3.64
CKLF-206ENST00000526149 PRG4Q92954 1404 aaPredicted RBP37.78■■■■□ 3.64
CKLF-206ENST00000526149 PRXQ9BXM0 1461 aa37.7■■■■□ 3.63
CKLF-206ENST00000526149 CSRNP3Q8WYN3 585 aa37.64■■■■□ 3.62
CKLF-206ENST00000526149 EEA1Q15075 1411 aa37.58■■■■□ 3.61
CKLF-206ENST00000526149 IQGAP2Q13576 1575 aa37.56■■■■□ 3.6
CKLF-206ENST00000526149 FAM9AQ8IZU1 332 aaPredicted RBP37.5■■■■□ 3.59
CKLF-206ENST00000526149 UGGT2Q9NYU1 1516 aa37.4■■■■□ 3.58
CKLF-206ENST00000526149 DISP1Q96F81 1524 aa37.39■■■■□ 3.58
CKLF-206ENST00000526149 CARMIL2Q6F5E8 1435 aa37.38■■■■□ 3.57
CKLF-206ENST00000526149 CTTNBP2Q8WZ74 1663 aa37.37■■■■□ 3.57
CKLF-206ENST00000526149 TNIKQ9UKE5 1360 aa37.32■■■■□ 3.57
CKLF-206ENST00000526149 PTPRGP23470 1445 aa37.31■■■■□ 3.56
CKLF-206ENST00000526149 TTBK1Q5TCY1 1321 aaPredicted RBP37.24■■■■□ 3.55
CKLF-206ENST00000526149 KIAA0556O60303 1618 aa37.23■■■■□ 3.55
CKLF-206ENST00000526149 TRHP20396 242 aaPredicted RBP37.23■■■■□ 3.55
CKLF-206ENST00000526149 KIF21BO75037 1637 aa37.21■■■■□ 3.55
CKLF-206ENST00000526149 ADCY10Q96PN6 1610 aa37.21■■■■□ 3.55
CKLF-206ENST00000526149 GOLGA3Q08378 1498 aa37.13■■■■□ 3.53
CKLF-206ENST00000526149 UACAQ9BZF9 1416 aa37.05■■■■□ 3.52
CKLF-206ENST00000526149 NPM1P06748 294 aaKnown RBP eCLIP37.05■■■■□ 3.52
CKLF-206ENST00000526149 UHRF1BP1LA0JNW5 1464 aa37.03■■■■□ 3.52
CKLF-206ENST00000526149 EHMT2Q96KQ7 1210 aa37.02■■■■□ 3.52
CKLF-206ENST00000526149 P3H3Q8IVL6 736 aa36.98■■■■□ 3.51
CKLF-206ENST00000526149 MAPKBP1O60336 1514 aa36.97■■■■□ 3.51
CKLF-206ENST00000526149 ABCC2Q92887 1545 aa36.97■■■■□ 3.51
CKLF-206ENST00000526149 SAMD9Q5K651 1589 aa36.96■■■■□ 3.51
CKLF-206ENST00000526149 UBTFP17480 764 aaKnown RBP36.92■■■■□ 3.5
CKLF-206ENST00000526149 RANGAP1P46060 587 aaPredicted RBP36.92■■■■□ 3.5
CKLF-206ENST00000526149 PLB1Q6P1J6 1458 aa36.92■■■■□ 3.5
CKLF-206ENST00000526149 ABCA8O94911 1581 aa36.86■■■■□ 3.49
CKLF-206ENST00000526149 KDM5BQ9UGL1 1544 aa36.85■■■■□ 3.49
CKLF-206ENST00000526149 ABCC10Q5T3U5 1492 aa36.83■■■■□ 3.49
CKLF-206ENST00000526149 KIF13AQ9H1H9 1805 aa36.8■■■■□ 3.48
CKLF-206ENST00000526149 FHOD3Q2V2M9 1422 aa36.77■■■■□ 3.48
CKLF-206ENST00000526149 FAM69CQ0P6D2 419 aa36.77■■■■□ 3.48
CKLF-206ENST00000526149 ASXL2Q76L83 1435 aa36.76■■■■□ 3.48
CKLF-206ENST00000526149 DIP2BQ9P265 1576 aa36.75■■■■□ 3.47
CKLF-206ENST00000526149 ZCCHC11Q5TAX3 1644 aaKnown RBP36.74■■■■□ 3.47
CKLF-206ENST00000526149 EFCAB5A4FU69 1503 aa36.74■■■■□ 3.47
CKLF-206ENST00000526149 ARHGAP35Q9NRY4 1499 aa36.62■■■■□ 3.45
CKLF-206ENST00000526149 RAPGEF6Q8TEU7 1601 aa36.6■■■■□ 3.45
CKLF-206ENST00000526149 ATP10BO94823 1461 aa36.58■■■■□ 3.45
CKLF-206ENST00000526149 ARID3CA6NKF2 412 aa36.58■■■■□ 3.45
CKLF-206ENST00000526149 EPRSP07814 1512 aaKnown RBP36.55■■■■□ 3.44
CKLF-206ENST00000526149 WDR7Q9Y4E6 1490 aa36.54■■■■□ 3.44
CKLF-206ENST00000526149 GLI2P10070 1586 aa36.53■■■■□ 3.44
CKLF-206ENST00000526149 NUP153P49790 1475 aaKnown RBP36.53■■■■□ 3.44
CKLF-206ENST00000526149 FMN1Q68DA7 1419 aa36.41■■■■□ 3.42
CKLF-206ENST00000526149 KCNH8Q96L42 1107 aa36.4■■■■□ 3.42
CKLF-206ENST00000526149 TSPOAP1O95153 1857 aa36.39■■■■□ 3.42
CKLF-206ENST00000526149 MAP3K4Q9Y6R4 1608 aa36.35■■■■□ 3.41
CKLF-206ENST00000526149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.35■■■■□ 3.41
CKLF-206ENST00000526149 HNRNPUL2Q1KMD3 747 aaKnown RBP36.35■■■■□ 3.41
CKLF-206ENST00000526149 PPRC1Q5VV67 1664 aaKnown RBP36.35■■■■□ 3.41
CKLF-206ENST00000526149 CLIP1P30622 1438 aa36.34■■■■□ 3.41
CKLF-206ENST00000526149 LOC105371045A0A1W2PR82 267 aa36.3■■■■□ 3.4
CKLF-206ENST00000526149 CDK13Q14004 1512 aaKnown RBP36.25■■■■□ 3.39
CKLF-206ENST00000526149 ATP1B4Q9UN42 357 aaPredicted RBP36.24■■■■□ 3.39
CKLF-206ENST00000526149 CD109Q6YHK3 1445 aa36.23■■■■□ 3.39
CKLF-206ENST00000526149 HECW1Q76N89 1606 aa36.23■■■■□ 3.39
CKLF-206ENST00000526149 PLEKHD1A6NEE1 506 aa36.22■■■■□ 3.39
CKLF-206ENST00000526149 CFAP43Q8NDM7 1665 aa36.2■■■■□ 3.39
CKLF-206ENST00000526149 MAGI3Q5TCQ9 1506 aa36.17■■■■□ 3.38
CKLF-206ENST00000526149 CEP162Q5TB80 1403 aa36.17■■■■□ 3.38
CKLF-206ENST00000526149 CASKIN1Q8WXD9 1431 aa36.16■■■■□ 3.38
CKLF-206ENST00000526149 TEX14Q8IWB6 1497 aa36.15■■■■□ 3.38
CKLF-206ENST00000526149 KDM6BO15054 1643 aa36.15■■■■□ 3.38
CKLF-206ENST00000526149 ABCA9Q8IUA7 1624 aa36.14■■■■□ 3.38
CKLF-206ENST00000526149 PCF11O94913 1555 aaKnown RBP36.13■■■■□ 3.37
CKLF-206ENST00000526149 COL17A1Q9UMD9 1497 aaPredicted RBP36.1■■■■□ 3.37
CKLF-206ENST00000526149 LRRIQ1Q96JM4 1722 aa36.09■■■■□ 3.37
CKLF-206ENST00000526149 FYCO1Q9BQS8 1478 aa36.03■■■■□ 3.36
CKLF-206ENST00000526149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36■■■■□ 3.352e-6■■■■■ 51.7
CKLF-206ENST00000526149 CDK11AQ9UQ88 783 aaPredicted RBP36■■■■□ 3.35
CKLF-206ENST00000526149 CCDC18Q5T9S5 1454 aa35.96■■■■□ 3.35
CKLF-206ENST00000526149 TROQ12816 1431 aaPredicted RBP35.94■■■■□ 3.34
CKLF-206ENST00000526149 TTC37Q6PGP7 1564 aa35.93■■■■□ 3.34
CKLF-206ENST00000526149 KIF14Q15058 1648 aa35.86■■■■□ 3.33
CKLF-206ENST00000526149 NEO1Q92859 1461 aa35.86■■■■□ 3.33
CKLF-206ENST00000526149 ARAP3Q8WWN8 1544 aa35.85■■■■□ 3.33
CKLF-206ENST00000526149 PHLDB1Q86UU1 1377 aa35.85■■■■□ 3.33
CKLF-206ENST00000526149 PLCH2O75038 1416 aa35.8■■■■□ 3.32
CKLF-206ENST00000526149 FANCAO15360 1455 aa35.77■■■■□ 3.32
CKLF-206ENST00000526149 AKNAQ7Z591 1439 aa35.74■■■■□ 3.31
CKLF-206ENST00000526149 VPS8Q8N3P4 1428 aa35.73■■■■□ 3.31
CKLF-206ENST00000526149 RAPGEF3O95398 923 aa35.71■■■■□ 3.31
CKLF-206ENST00000526149 MYO5CQ9NQX4 1742 aa35.67■■■■□ 3.3
CKLF-206ENST00000526149 CFAP74Q9C0B2 1584 aa35.67■■■■□ 3.3
CKLF-206ENST00000526149 EFCAB2Q5VUJ9 269 aa35.64■■■■□ 3.3
CKLF-206ENST00000526149 FRMPD1Q5SYB0 1578 aa35.64■■■■□ 3.3
CKLF-206ENST00000526149 MTUS2Q5JR59 1369 aa35.62■■■■□ 3.29
CKLF-206ENST00000526149 DENND4BO75064 1496 aaPredicted RBP35.61■■■■□ 3.29
CKLF-206ENST00000526149 ARHGAP5Q13017 1502 aa35.57■■■■□ 3.29
CKLF-206ENST00000526149 ADGRL1O94910 1474 aa35.57■■■■□ 3.28
CKLF-206ENST00000526149 SCAPERQ9BY12 1400 aa35.57■■■■□ 3.28
CKLF-206ENST00000526149 CDC42BPBQ9Y5S2 1711 aa35.56■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms