RNA–Protein interactions for RNA: ENST00000525798.1

PACS1-204, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-204ENST00000525798 RANGAP1P46060 587 aaPredicted RBP19.04■□□□□ 0.64
PACS1-204ENST00000525798 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
PACS1-204ENST00000525798 KIAA0586Q9BVV6 1533 aa19■□□□□ 0.63
PACS1-204ENST00000525798 JPH4Q96JJ6 628 aa18.99■□□□□ 0.63
PACS1-204ENST00000525798 TNIKQ9UKE5 1360 aa18.98■□□□□ 0.63
PACS1-204ENST00000525798 CLASP1Q7Z460 1538 aa18.94■□□□□ 0.62
PACS1-204ENST00000525798 P3H3Q8IVL6 736 aa18.9■□□□□ 0.62
PACS1-204ENST00000525798 IQGAP2Q13576 1575 aa18.89■□□□□ 0.61
PACS1-204ENST00000525798 PRG4Q92954 1404 aaPredicted RBP18.87■□□□□ 0.61
PACS1-204ENST00000525798 TTBK1Q5TCY1 1321 aaPredicted RBP18.83■□□□□ 0.61
PACS1-204ENST00000525798 UGGT2Q9NYU1 1516 aa18.83■□□□□ 0.6
PACS1-204ENST00000525798 CEP162Q5TB80 1403 aa18.83■□□□□ 0.6
PACS1-204ENST00000525798 CTTNBP2Q8WZ74 1663 aa18.82■□□□□ 0.6
PACS1-204ENST00000525798 CLIP1P30622 1438 aa18.82■□□□□ 0.6
PACS1-204ENST00000525798 DISP1Q96F81 1524 aa18.8■□□□□ 0.6
PACS1-204ENST00000525798 ERCC6L2Q5T890 1561 aa18.8■□□□□ 0.6
PACS1-204ENST00000525798 DNAJC5Q9H3Z4 198 aa18.79■□□□□ 0.6
PACS1-204ENST00000525798 SHROOM2Q13796 1616 aa18.78■□□□□ 0.6
PACS1-204ENST00000525798 CARMIL2Q6F5E8 1435 aa18.78■□□□□ 0.6
PACS1-204ENST00000525798 ARHGAP35Q9NRY4 1499 aa18.77■□□□□ 0.6
PACS1-204ENST00000525798 FHOD3Q2V2M9 1422 aa18.76■□□□□ 0.59
PACS1-204ENST00000525798 ARHGEF11O15085 1522 aa18.72■□□□□ 0.59
PACS1-204ENST00000525798 PTPRGP23470 1445 aa18.71■□□□□ 0.59
PACS1-204ENST00000525798 SAMD9Q5K651 1589 aa18.71■□□□□ 0.59
PACS1-204ENST00000525798 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
PACS1-204ENST00000525798 KIAA0556O60303 1618 aa18.71■□□□□ 0.58
PACS1-204ENST00000525798 EFCAB5A4FU69 1503 aa18.7■□□□□ 0.58
PACS1-204ENST00000525798 CYB5RLQ6IPT4 315 aa18.68■□□□□ 0.58
PACS1-204ENST00000525798 RIMBP3CA6NJZ7 1639 aa18.63■□□□□ 0.57
PACS1-204ENST00000525798 RIMBP3BA6NNM3 1639 aa18.63■□□□□ 0.57
PACS1-204ENST00000525798 RIMBP3Q9UFD9 1639 aa18.63■□□□□ 0.57
PACS1-204ENST00000525798 ATP1B4Q9UN42 357 aaPredicted RBP18.62■□□□□ 0.57
PACS1-204ENST00000525798 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
PACS1-204ENST00000525798 PLB1Q6P1J6 1458 aa18.58■□□□□ 0.57
PACS1-204ENST00000525798 FMN1Q68DA7 1419 aa18.58■□□□□ 0.57
PACS1-204ENST00000525798 UACAQ9BZF9 1416 aa18.57■□□□□ 0.56
PACS1-204ENST00000525798 VPS8Q8N3P4 1428 aa18.55■□□□□ 0.56
PACS1-204ENST00000525798 CASKIN1Q8WXD9 1431 aa18.51■□□□□ 0.55
PACS1-204ENST00000525798 ABCA8O94911 1581 aa18.51■□□□□ 0.55
PACS1-204ENST00000525798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
PACS1-204ENST00000525798 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
PACS1-204ENST00000525798 UHRF1BP1LA0JNW5 1464 aa18.47■□□□□ 0.55
PACS1-204ENST00000525798 NUP153P49790 1475 aaKnown RBP18.47■□□□□ 0.55
PACS1-204ENST00000525798 ABCC2Q92887 1545 aa18.46■□□□□ 0.55
PACS1-204ENST00000525798 NPM1P06748 294 aaKnown RBP eCLIP18.45■□□□□ 0.54
PACS1-204ENST00000525798 PCF11O94913 1555 aaKnown RBP18.45■□□□□ 0.54
PACS1-204ENST00000525798 RAPGEF6Q8TEU7 1601 aa18.45■□□□□ 0.54
PACS1-204ENST00000525798 ATP10BO94823 1461 aa18.44■□□□□ 0.54
PACS1-204ENST00000525798 ADCY10Q96PN6 1610 aa18.43■□□□□ 0.54
PACS1-204ENST00000525798 FYCO1Q9BQS8 1478 aa18.43■□□□□ 0.54
PACS1-204ENST00000525798 EPRSP07814 1512 aaKnown RBP18.4■□□□□ 0.54
PACS1-204ENST00000525798 APLP2Q06481 763 aa18.4■□□□□ 0.54
PACS1-204ENST00000525798 CDK13Q14004 1512 aaKnown RBP18.39■□□□□ 0.54
PACS1-204ENST00000525798 KDM5BQ9UGL1 1544 aa18.39■□□□□ 0.53
PACS1-204ENST00000525798 PPARGC1BQ86YN6 1023 aaKnown RBP18.38■□□□□ 0.53
PACS1-204ENST00000525798 HECW1Q76N89 1606 aa18.38■□□□□ 0.53
PACS1-204ENST00000525798 KANK4Q5T7N3 995 aaPredicted RBP18.37■□□□□ 0.53
PACS1-204ENST00000525798 PLEKHD1A6NEE1 506 aa18.35■□□□□ 0.53
PACS1-204ENST00000525798 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.52
PACS1-204ENST00000525798 CCDC18Q5T9S5 1454 aa18.33■□□□□ 0.52
PACS1-204ENST00000525798 KCNH8Q96L42 1107 aa18.32■□□□□ 0.52
PACS1-204ENST00000525798 ASXL2Q76L83 1435 aa18.31■□□□□ 0.52
PACS1-204ENST00000525798 ZCCHC11Q5TAX3 1644 aaKnown RBP18.29■□□□□ 0.52
PACS1-204ENST00000525798 MAGI3Q5TCQ9 1506 aa18.27■□□□□ 0.51
PACS1-204ENST00000525798 MTUS2Q5JR59 1369 aa18.27■□□□□ 0.51
PACS1-204ENST00000525798 LRRIQ1Q96JM4 1722 aa18.26■□□□□ 0.51
PACS1-204ENST00000525798 TIAM1Q13009 1591 aa18.26■□□□□ 0.51
PACS1-204ENST00000525798 MAP3K1Q13233 1512 aa18.26■□□□□ 0.51
PACS1-204ENST00000525798 LRRC9Q6ZRR7 1453 aa18.25■□□□□ 0.51
PACS1-204ENST00000525798 TROQ12816 1431 aaPredicted RBP18.24■□□□□ 0.51
PACS1-204ENST00000525798 WDR7Q9Y4E6 1490 aa18.24■□□□□ 0.51
PACS1-204ENST00000525798 MAPKBP1O60336 1514 aa18.21■□□□□ 0.51
PACS1-204ENST00000525798 FAM69CQ0P6D2 419 aa18.2■□□□□ 0.5
PACS1-204ENST00000525798 CFAP43Q8NDM7 1665 aa18.18■□□□□ 0.5
PACS1-204ENST00000525798 TRHP20396 242 aaPredicted RBP18.16■□□□□ 0.5
PACS1-204ENST00000525798 EHBP1L1Q8N3D4 1523 aa18.15■□□□□ 0.5
PACS1-204ENST00000525798 ABCC10Q5T3U5 1492 aa18.14■□□□□ 0.5
PACS1-204ENST00000525798 NCOA2Q15596 1464 aa18.14■□□□□ 0.49
PACS1-204ENST00000525798 KIF14Q15058 1648 aa18.12■□□□□ 0.49
PACS1-204ENST00000525798 PHLDB1Q86UU1 1377 aa18.11■□□□□ 0.49
PACS1-204ENST00000525798 CCNB3Q8WWL7 1395 aa18.1■□□□□ 0.49
PACS1-204ENST00000525798 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.09■□□□□ 0.49
PACS1-204ENST00000525798 CD109Q6YHK3 1445 aa18.07■□□□□ 0.48
PACS1-204ENST00000525798 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
PACS1-204ENST00000525798 DIP2BQ9P265 1576 aa18.06■□□□□ 0.48
PACS1-204ENST00000525798 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
PACS1-204ENST00000525798 ZNF777Q9ULD5 760 aaPredicted RBP18.05■□□□□ 0.48
PACS1-204ENST00000525798 TTC37Q6PGP7 1564 aa18.04■□□□□ 0.48
PACS1-204ENST00000525798 PLCH2O75038 1416 aa18.04■□□□□ 0.48
PACS1-204ENST00000525798 GLI2P10070 1586 aa18.04■□□□□ 0.48
PACS1-204ENST00000525798 SUPT6HQ7KZ85 1726 aaKnown RBP18.03■□□□□ 0.48
PACS1-204ENST00000525798 ZNF644Q9H582 1327 aaPredicted RBP18.02■□□□□ 0.48
PACS1-204ENST00000525798 MYOM3Q5VTT5 1437 aa18.01■□□□□ 0.47
PACS1-204ENST00000525798 EFCAB2Q5VUJ9 269 aa18.01■□□□□ 0.47
PACS1-204ENST00000525798 ABCA9Q8IUA7 1624 aa18.01■□□□□ 0.47
PACS1-204ENST00000525798 FAM50AQ14320 339 aaKnown RBP17.97■□□□□ 0.47
PACS1-204ENST00000525798 ARHGAP5Q13017 1502 aa17.96■□□□□ 0.47
PACS1-204ENST00000525798 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
PACS1-204ENST00000525798 MAP3K4Q9Y6R4 1608 aa17.94■□□□□ 0.46
PACS1-204ENST00000525798 HNRNPMP52272 730 aaKnown RBP eCLIP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms