RNA–Protein interactions for RNA: ENST00000525592.1

TM9SF1-204, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-204ENST00000525592 JPH4Q96JJ6 628 aa34.41■■■■□ 3.1
TM9SF1-204ENST00000525592 CARMIL1Q5VZK9 1371 aa34.38■■■■□ 3.09
TM9SF1-204ENST00000525592 KIAA0586Q9BVV6 1533 aa34.38■■■■□ 3.09
TM9SF1-204ENST00000525592 TRHP20396 242 aaPredicted RBP34.35■■■■□ 3.09
TM9SF1-204ENST00000525592 RAPGEF2Q9Y4G8 1499 aa34.15■■■■□ 3.06
TM9SF1-204ENST00000525592 IQGAP2Q13576 1575 aa34.12■■■■□ 3.05
TM9SF1-204ENST00000525592 CARMIL2Q6F5E8 1435 aa34.03■■■■□ 3.04
TM9SF1-204ENST00000525592 ADCY10Q96PN6 1610 aa33.98■■■■□ 3.03
TM9SF1-204ENST00000525592 PTPRGP23470 1445 aa33.94■■■■□ 3.02
TM9SF1-204ENST00000525592 TNIKQ9UKE5 1360 aa33.93■■■■□ 3.02
TM9SF1-204ENST00000525592 PRXQ9BXM0 1461 aa33.93■■■■□ 3.02
TM9SF1-204ENST00000525592 UGGT2Q9NYU1 1516 aa33.93■■■■□ 3.02
TM9SF1-204ENST00000525592 NPM1P06748 294 aaKnown RBP eCLIP33.91■■■■□ 3.02
TM9SF1-204ENST00000525592 MAPKBP1O60336 1514 aa33.9■■■■□ 3.02
TM9SF1-204ENST00000525592 DISP1Q96F81 1524 aa33.89■■■■□ 3.02
TM9SF1-204ENST00000525592 CTTNBP2Q8WZ74 1663 aa33.89■■■■□ 3.02
TM9SF1-204ENST00000525592 KIF13AQ9H1H9 1805 aa33.83■■■■□ 3.01
TM9SF1-204ENST00000525592 KIAA0556O60303 1618 aa33.8■■■■□ 3
TM9SF1-204ENST00000525592 ABCC10Q5T3U5 1492 aa33.77■■■■□ 3
TM9SF1-204ENST00000525592 EEA1Q15075 1411 aa33.77■■■■□ 3
TM9SF1-204ENST00000525592 UHRF1BP1LA0JNW5 1464 aa33.75■■■□□ 2.99
TM9SF1-204ENST00000525592 TTBK1Q5TCY1 1321 aaPredicted RBP33.74■■■□□ 2.99
TM9SF1-204ENST00000525592 ABCC2Q92887 1545 aa33.74■■■□□ 2.99
TM9SF1-204ENST00000525592 CSRNP3Q8WYN3 585 aa33.72■■■□□ 2.99
TM9SF1-204ENST00000525592 UACAQ9BZF9 1416 aa33.71■■■□□ 2.99
TM9SF1-204ENST00000525592 GOLGA3Q08378 1498 aa33.71■■■□□ 2.99
TM9SF1-204ENST00000525592 DIP2BQ9P265 1576 aa33.71■■■□□ 2.99
TM9SF1-204ENST00000525592 FAM69CQ0P6D2 419 aa33.65■■■□□ 2.98
TM9SF1-204ENST00000525592 KDM5BQ9UGL1 1544 aa33.58■■■□□ 2.97
TM9SF1-204ENST00000525592 PLB1Q6P1J6 1458 aa33.56■■■□□ 2.96
TM9SF1-204ENST00000525592 ASXL2Q76L83 1435 aa33.54■■■□□ 2.96
TM9SF1-204ENST00000525592 ZCCHC11Q5TAX3 1644 aaKnown RBP33.49■■■□□ 2.95
TM9SF1-204ENST00000525592 CHIC1Q5VXU3 224 aa33.46■■■□□ 2.95
TM9SF1-204ENST00000525592 ABCA8O94911 1581 aa33.46■■■□□ 2.95
TM9SF1-204ENST00000525592 GLI2P10070 1586 aa33.45■■■□□ 2.95
TM9SF1-204ENST00000525592 KIF21BO75037 1637 aa33.45■■■□□ 2.95
TM9SF1-204ENST00000525592 SAMD9Q5K651 1589 aa33.43■■■□□ 2.94
TM9SF1-204ENST00000525592 FAM9AQ8IZU1 332 aaPredicted RBP33.41■■■□□ 2.94
TM9SF1-204ENST00000525592 TSPOAP1O95153 1857 aa33.39■■■□□ 2.94
TM9SF1-204ENST00000525592 EPRSP07814 1512 aaKnown RBP33.36■■■□□ 2.93
TM9SF1-204ENST00000525592 WDR7Q9Y4E6 1490 aa33.32■■■□□ 2.92
TM9SF1-204ENST00000525592 KDM6BO15054 1643 aa33.3■■■□□ 2.92
TM9SF1-204ENST00000525592 P3H3Q8IVL6 736 aa33.28■■■□□ 2.92
TM9SF1-204ENST00000525592 MAP3K4Q9Y6R4 1608 aa33.28■■■□□ 2.92
TM9SF1-204ENST00000525592 PPRC1Q5VV67 1664 aaKnown RBP33.27■■■□□ 2.92
TM9SF1-204ENST00000525592 EFCAB5A4FU69 1503 aa33.22■■■□□ 2.91
TM9SF1-204ENST00000525592 RAPGEF6Q8TEU7 1601 aa33.19■■■□□ 2.9
TM9SF1-204ENST00000525592 TEX14Q8IWB6 1497 aa33.17■■■□□ 2.9
TM9SF1-204ENST00000525592 ATP10BO94823 1461 aa33.15■■■□□ 2.9
TM9SF1-204ENST00000525592 FHOD3Q2V2M9 1422 aa33.14■■■□□ 2.9
TM9SF1-204ENST00000525592 RANGAP1P46060 587 aaPredicted RBP33.13■■■□□ 2.89
TM9SF1-204ENST00000525592 CFAP43Q8NDM7 1665 aa33.12■■■□□ 2.89
TM9SF1-204ENST00000525592 UBTFP17480 764 aaKnown RBP33.07■■■□□ 2.88
TM9SF1-204ENST00000525592 NUP153P49790 1475 aaKnown RBP33.05■■■□□ 2.88
TM9SF1-204ENST00000525592 MAGI3Q5TCQ9 1506 aa33.04■■■□□ 2.88
TM9SF1-204ENST00000525592 ARID3CA6NKF2 412 aa33.04■■■□□ 2.88
TM9SF1-204ENST00000525592 KCNH8Q96L42 1107 aa33.04■■■□□ 2.88
TM9SF1-204ENST00000525592 CD109Q6YHK3 1445 aa33.03■■■□□ 2.88
TM9SF1-204ENST00000525592 AEBP2Q6ZN18 517 aaPredicted RBP32.99■■■□□ 2.87
TM9SF1-204ENST00000525592 EHMT2Q96KQ7 1210 aa32.97■■■□□ 2.87
TM9SF1-204ENST00000525592 COL17A1Q9UMD9 1497 aaPredicted RBP32.95■■■□□ 2.87
TM9SF1-204ENST00000525592 ABCA9Q8IUA7 1624 aa32.94■■■□□ 2.86
TM9SF1-204ENST00000525592 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.92■■■□□ 2.86
TM9SF1-204ENST00000525592 HNRNPUL2Q1KMD3 747 aaKnown RBP32.92■■■□□ 2.86
TM9SF1-204ENST00000525592 ARHGAP35Q9NRY4 1499 aa32.91■■■□□ 2.86
TM9SF1-204ENST00000525592 FMN1Q68DA7 1419 aa32.89■■■□□ 2.86
TM9SF1-204ENST00000525592 PLEKHD1A6NEE1 506 aa32.8■■■□□ 2.84
TM9SF1-204ENST00000525592 HECW1Q76N89 1606 aa32.8■■■□□ 2.84
TM9SF1-204ENST00000525592 PHLDB1Q86UU1 1377 aa32.78■■■□□ 2.84
TM9SF1-204ENST00000525592 ARAP3Q8WWN8 1544 aa32.77■■■□□ 2.84
TM9SF1-204ENST00000525592 CDK13Q14004 1512 aaKnown RBP32.74■■■□□ 2.83
TM9SF1-204ENST00000525592 NEO1Q92859 1461 aa32.73■■■□□ 2.83
TM9SF1-204ENST00000525592 KDM4FA0A1W2PPD8 638 aa32.67■■■□□ 2.82
TM9SF1-204ENST00000525592 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.67■■■□□ 2.82
TM9SF1-204ENST00000525592 TTC37Q6PGP7 1564 aa32.62■■■□□ 2.81
TM9SF1-204ENST00000525592 ATP1B4Q9UN42 357 aaPredicted RBP32.62■■■□□ 2.81
TM9SF1-204ENST00000525592 CFAP74Q9C0B2 1584 aa32.61■■■□□ 2.81
TM9SF1-204ENST00000525592 CDK11AQ9UQ88 783 aaPredicted RBP32.6■■■□□ 2.81
TM9SF1-204ENST00000525592 ADGRL1O94910 1474 aa32.6■■■□□ 2.81
TM9SF1-204ENST00000525592 CLIP1P30622 1438 aa32.56■■■□□ 2.8
TM9SF1-204ENST00000525592 CASKIN1Q8WXD9 1431 aa32.56■■■□□ 2.8
TM9SF1-204ENST00000525592 FANCAO15360 1455 aa32.55■■■□□ 2.8
TM9SF1-204ENST00000525592 PCF11O94913 1555 aaKnown RBP32.55■■■□□ 2.8
TM9SF1-204ENST00000525592 LRRIQ1Q96JM4 1722 aa32.54■■■□□ 2.8
TM9SF1-204ENST00000525592 CCDC18Q5T9S5 1454 aa32.52■■■□□ 2.8
TM9SF1-204ENST00000525592 FRMPD1Q5SYB0 1578 aa32.51■■■□□ 2.79
TM9SF1-204ENST00000525592 TROQ12816 1431 aaPredicted RBP32.51■■■□□ 2.79
TM9SF1-204ENST00000525592 KIF14Q15058 1648 aa32.5■■■□□ 2.79
TM9SF1-204ENST00000525592 AKNAQ7Z591 1439 aa32.5■■■□□ 2.79
TM9SF1-204ENST00000525592 FYCO1Q9BQS8 1478 aa32.48■■■□□ 2.79
TM9SF1-204ENST00000525592 RAPGEF3O95398 923 aa32.48■■■□□ 2.79
TM9SF1-204ENST00000525592 PLCH2O75038 1416 aa32.47■■■□□ 2.79
TM9SF1-204ENST00000525592 DENND4BO75064 1496 aaPredicted RBP32.46■■■□□ 2.79
TM9SF1-204ENST00000525592 MYO5CQ9NQX4 1742 aa32.46■■■□□ 2.79
TM9SF1-204ENST00000525592 RICTORQ6R327 1708 aa32.44■■■□□ 2.78
TM9SF1-204ENST00000525592 ZMYM4Q5VZL5 1548 aa32.36■■■□□ 2.77
TM9SF1-204ENST00000525592 ARHGEF40Q8TER5 1519 aa32.36■■■□□ 2.77
TM9SF1-204ENST00000525592 EFCAB2Q5VUJ9 269 aa32.32■■■□□ 2.76
TM9SF1-204ENST00000525592 POGZQ7Z3K3 1410 aa32.3■■■□□ 2.76
TM9SF1-204ENST00000525592 CEP162Q5TB80 1403 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms