RNA–Protein interactions for RNA: ENST00000525554.1

IFITM1-203, Transcript of interferon induced transmembrane protein 1, humanhuman

TSL 3

Gene IFITM1, Length 80 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-203ENST00000525554 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
IFITM1-203ENST00000525554 KIAA0586Q9BVV6 1533 aa23.84■■□□□ 1.41
IFITM1-203ENST00000525554 CUL7Q14999 1698 aa23.82■■□□□ 1.4
IFITM1-203ENST00000525554 NPM1P06748 294 aaKnown RBP eCLIP23.77■■□□□ 1.4
IFITM1-203ENST00000525554 CARMIL1Q5VZK9 1371 aa23.76■■□□□ 1.39
IFITM1-203ENST00000525554 MAPKBP1O60336 1514 aa23.65■■□□□ 1.38
IFITM1-203ENST00000525554 ABCC10Q5T3U5 1492 aa23.64■■□□□ 1.38
IFITM1-203ENST00000525554 CARMIL2Q6F5E8 1435 aa23.62■■□□□ 1.37
IFITM1-203ENST00000525554 KIF13AQ9H1H9 1805 aa23.62■■□□□ 1.37
IFITM1-203ENST00000525554 FAM69CQ0P6D2 419 aa23.62■■□□□ 1.37
IFITM1-203ENST00000525554 PTPRGP23470 1445 aa23.61■■□□□ 1.37
IFITM1-203ENST00000525554 ADCY10Q96PN6 1610 aa23.61■■□□□ 1.37
IFITM1-203ENST00000525554 TNIKQ9UKE5 1360 aa23.58■■□□□ 1.37
IFITM1-203ENST00000525554 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
IFITM1-203ENST00000525554 IQGAP2Q13576 1575 aa23.55■■□□□ 1.36
IFITM1-203ENST00000525554 RAPGEF2Q9Y4G8 1499 aa23.53■■□□□ 1.36
IFITM1-203ENST00000525554 DIP2BQ9P265 1576 aa23.5■■□□□ 1.35
IFITM1-203ENST00000525554 ABCC2Q92887 1545 aa23.46■■□□□ 1.35
IFITM1-203ENST00000525554 UHRF1BP1LA0JNW5 1464 aa23.45■■□□□ 1.34
IFITM1-203ENST00000525554 DISP1Q96F81 1524 aa23.44■■□□□ 1.34
IFITM1-203ENST00000525554 UGGT2Q9NYU1 1516 aa23.43■■□□□ 1.34
IFITM1-203ENST00000525554 UACAQ9BZF9 1416 aa23.42■■□□□ 1.34
IFITM1-203ENST00000525554 TTBK1Q5TCY1 1321 aaPredicted RBP23.42■■□□□ 1.34
IFITM1-203ENST00000525554 PLB1Q6P1J6 1458 aa23.41■■□□□ 1.34
IFITM1-203ENST00000525554 ASXL2Q76L83 1435 aa23.36■■□□□ 1.33
IFITM1-203ENST00000525554 KDM5BQ9UGL1 1544 aa23.33■■□□□ 1.32
IFITM1-203ENST00000525554 GLI2P10070 1586 aa23.32■■□□□ 1.32
IFITM1-203ENST00000525554 KIAA0556O60303 1618 aa23.3■■□□□ 1.32
IFITM1-203ENST00000525554 PRXQ9BXM0 1461 aa23.3■■□□□ 1.32
IFITM1-203ENST00000525554 KDM6BO15054 1643 aa23.3■■□□□ 1.32
IFITM1-203ENST00000525554 GOLGA3Q08378 1498 aa23.29■■□□□ 1.32
IFITM1-203ENST00000525554 TSPOAP1O95153 1857 aa23.27■■□□□ 1.32
IFITM1-203ENST00000525554 CTTNBP2Q8WZ74 1663 aa23.24■■□□□ 1.31
IFITM1-203ENST00000525554 EPRSP07814 1512 aaKnown RBP23.22■■□□□ 1.31
IFITM1-203ENST00000525554 FAM9AQ8IZU1 332 aaPredicted RBP23.21■■□□□ 1.31
IFITM1-203ENST00000525554 ZCCHC11Q5TAX3 1644 aaKnown RBP23.19■■□□□ 1.3
IFITM1-203ENST00000525554 CSRNP3Q8WYN3 585 aa23.17■■□□□ 1.3
IFITM1-203ENST00000525554 TEX14Q8IWB6 1497 aa23.15■■□□□ 1.3
IFITM1-203ENST00000525554 PPRC1Q5VV67 1664 aaKnown RBP23.15■■□□□ 1.3
IFITM1-203ENST00000525554 WDR7Q9Y4E6 1490 aa23.14■■□□□ 1.29
IFITM1-203ENST00000525554 MAP3K4Q9Y6R4 1608 aa23.13■■□□□ 1.29
IFITM1-203ENST00000525554 ABCA8O94911 1581 aa23.12■■□□□ 1.29
IFITM1-203ENST00000525554 KDM4FA0A1W2PPD8 638 aa23.11■■□□□ 1.29
IFITM1-203ENST00000525554 EEA1Q15075 1411 aa23.08■■□□□ 1.29
IFITM1-203ENST00000525554 COL17A1Q9UMD9 1497 aaPredicted RBP23.05■■□□□ 1.28
IFITM1-203ENST00000525554 KCNH8Q96L42 1107 aa23.03■■□□□ 1.28
IFITM1-203ENST00000525554 MAGI3Q5TCQ9 1506 aa23.03■■□□□ 1.28
IFITM1-203ENST00000525554 CD109Q6YHK3 1445 aa23.02■■□□□ 1.28
IFITM1-203ENST00000525554 CFAP43Q8NDM7 1665 aa22.98■■□□□ 1.27
IFITM1-203ENST00000525554 P3H3Q8IVL6 736 aa22.98■■□□□ 1.27
IFITM1-203ENST00000525554 ATP10BO94823 1461 aa22.96■■□□□ 1.27
IFITM1-203ENST00000525554 SAMD9Q5K651 1589 aa22.95■■□□□ 1.26
IFITM1-203ENST00000525554 PHLDB1Q86UU1 1377 aa22.9■■□□□ 1.26
IFITM1-203ENST00000525554 ADGRL1O94910 1474 aa22.88■■□□□ 1.25
IFITM1-203ENST00000525554 RAPGEF6Q8TEU7 1601 aa22.86■■□□□ 1.25
IFITM1-203ENST00000525554 ARID3CA6NKF2 412 aa22.85■■□□□ 1.25
IFITM1-203ENST00000525554 ARAP3Q8WWN8 1544 aa22.85■■□□□ 1.25
IFITM1-203ENST00000525554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.82■■□□□ 1.24
IFITM1-203ENST00000525554 HNRNPUL2Q1KMD3 747 aaKnown RBP22.82■■□□□ 1.24
IFITM1-203ENST00000525554 ABCA9Q8IUA7 1624 aa22.82■■□□□ 1.24
IFITM1-203ENST00000525554 KIF21BO75037 1637 aa22.8■■□□□ 1.24
IFITM1-203ENST00000525554 NUP153P49790 1475 aaKnown RBP22.79■■□□□ 1.24
IFITM1-203ENST00000525554 PLEKHD1A6NEE1 506 aa22.78■■□□□ 1.24
IFITM1-203ENST00000525554 RANGAP1P46060 587 aaPredicted RBP22.78■■□□□ 1.24
IFITM1-203ENST00000525554 EFCAB5A4FU69 1503 aa22.77■■□□□ 1.24
IFITM1-203ENST00000525554 FHOD3Q2V2M9 1422 aa22.77■■□□□ 1.24
IFITM1-203ENST00000525554 NEO1Q92859 1461 aa22.76■■□□□ 1.23
IFITM1-203ENST00000525554 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
IFITM1-203ENST00000525554 UBTFP17480 764 aaKnown RBP22.68■■□□□ 1.22
IFITM1-203ENST00000525554 RAPGEF3O95398 923 aa22.67■■□□□ 1.22
IFITM1-203ENST00000525554 FMN1Q68DA7 1419 aa22.62■■□□□ 1.21
IFITM1-203ENST00000525554 AKNAQ7Z591 1439 aa22.58■■□□□ 1.21
IFITM1-203ENST00000525554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.57■■□□□ 1.2
IFITM1-203ENST00000525554 CDK11AQ9UQ88 783 aaPredicted RBP22.57■■□□□ 1.2
IFITM1-203ENST00000525554 FANCAO15360 1455 aa22.57■■□□□ 1.2
IFITM1-203ENST00000525554 DENND4BO75064 1496 aaPredicted RBP22.57■■□□□ 1.2
IFITM1-203ENST00000525554 CFAP74Q9C0B2 1584 aa22.55■■□□□ 1.2
IFITM1-203ENST00000525554 HECW2Q9P2P5 1572 aa22.54■■□□□ 1.2
IFITM1-203ENST00000525554 ARHGAP35Q9NRY4 1499 aa22.54■■□□□ 1.2
IFITM1-203ENST00000525554 FRMPD1Q5SYB0 1578 aa22.53■■□□□ 1.2
IFITM1-203ENST00000525554 CDK13Q14004 1512 aaKnown RBP22.52■■□□□ 1.19
IFITM1-203ENST00000525554 PLCH2O75038 1416 aa22.51■■□□□ 1.19
IFITM1-203ENST00000525554 EHMT2Q96KQ7 1210 aa22.5■■□□□ 1.19
IFITM1-203ENST00000525554 ATP1B4Q9UN42 357 aaPredicted RBP22.5■■□□□ 1.19
IFITM1-203ENST00000525554 ARID4BQ4LE39 1312 aaPredicted RBP22.5■■□□□ 1.19
IFITM1-203ENST00000525554 HECW1Q76N89 1606 aa22.49■■□□□ 1.19
IFITM1-203ENST00000525554 ADAMTSL3P82987 1691 aa22.49■■□□□ 1.19
IFITM1-203ENST00000525554 TTC37Q6PGP7 1564 aa22.49■■□□□ 1.19
IFITM1-203ENST00000525554 RICTORQ6R327 1708 aa22.48■■□□□ 1.19
IFITM1-203ENST00000525554 PTPRMP28827 1452 aa22.47■■□□□ 1.19
IFITM1-203ENST00000525554 MAGI2Q86UL8 1455 aa22.47■■□□□ 1.19
IFITM1-203ENST00000525554 EFCAB2Q5VUJ9 269 aa22.46■■□□□ 1.19
IFITM1-203ENST00000525554 ZMYM4Q5VZL5 1548 aa22.45■■□□□ 1.18
IFITM1-203ENST00000525554 ARHGEF40Q8TER5 1519 aa22.45■■□□□ 1.18
IFITM1-203ENST00000525554 BCORL1Q5H9F3 1711 aa22.43■■□□□ 1.18
IFITM1-203ENST00000525554 POGZQ7Z3K3 1410 aa22.42■■□□□ 1.18
IFITM1-203ENST00000525554 SCAPERQ9BY12 1400 aa22.42■■□□□ 1.18
IFITM1-203ENST00000525554 TROQ12816 1431 aaPredicted RBP22.41■■□□□ 1.18
IFITM1-203ENST00000525554 CLIP1P30622 1438 aa22.4■■□□□ 1.18
IFITM1-203ENST00000525554 ZFYVE16Q7Z3T8 1539 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms