RNA–Protein interactions for RNA: ENST00000525523.1

AC055860.1-201, humanhuman

TSL 5 BASIC

Gene AC055860.1, Length 688 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055860.1-201ENST00000525523 SHROOM2Q13796 1616 aa14.07□□□□□ -0.16
AC055860.1-201ENST00000525523 KDM6BO15054 1643 aa14.06□□□□□ -0.16
AC055860.1-201ENST00000525523 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
AC055860.1-201ENST00000525523 DIP2BQ9P265 1576 aa14.01□□□□□ -0.17
AC055860.1-201ENST00000525523 CUX1P39880 1505 aa14.01□□□□□ -0.17
AC055860.1-201ENST00000525523 GRIN2AQ12879 1464 aa14.01□□□□□ -0.17
AC055860.1-201ENST00000525523 KDM4FA0A1W2PPD8 638 aa14□□□□□ -0.17
AC055860.1-201ENST00000525523 ADAMTS12P58397 1594 aa14□□□□□ -0.17
AC055860.1-201ENST00000525523 ABCC10Q5T3U5 1492 aa13.99□□□□□ -0.17
AC055860.1-201ENST00000525523 MAPKBP1O60336 1514 aa13.99□□□□□ -0.17
AC055860.1-201ENST00000525523 NUP160Q12769 1436 aa13.98□□□□□ -0.17
AC055860.1-201ENST00000525523 ABCA10Q8WWZ4 1543 aa13.95□□□□□ -0.18
AC055860.1-201ENST00000525523 HOXD11P31277 338 aaPredicted RBP13.93□□□□□ -0.18
AC055860.1-201ENST00000525523 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
AC055860.1-201ENST00000525523 HECW2Q9P2P5 1572 aa13.92□□□□□ -0.18
AC055860.1-201ENST00000525523 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
AC055860.1-201ENST00000525523 FAM69CQ0P6D2 419 aa13.9□□□□□ -0.18
AC055860.1-201ENST00000525523 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
AC055860.1-201ENST00000525523 ADCY10Q96PN6 1610 aa13.86□□□□□ -0.19
AC055860.1-201ENST00000525523 PRG4Q92954 1404 aaPredicted RBP13.84□□□□□ -0.19
AC055860.1-201ENST00000525523 FHAD1B1AJZ9 1412 aa13.83□□□□□ -0.2
AC055860.1-201ENST00000525523 RUSC2Q8N2Y8 1516 aa13.83□□□□□ -0.2
AC055860.1-201ENST00000525523 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
AC055860.1-201ENST00000525523 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
AC055860.1-201ENST00000525523 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
AC055860.1-201ENST00000525523 DCAF8L1A6NGE4 600 aa13.78□□□□□ -0.2
AC055860.1-201ENST00000525523 PPRC1Q5VV67 1664 aaKnown RBP13.78□□□□□ -0.2
AC055860.1-201ENST00000525523 FBXO41Q8TF61 875 aa13.75□□□□□ -0.21
AC055860.1-201ENST00000525523 WRNQ14191 1432 aaPredicted RBP eCLIP13.73□□□□□ -0.21
AC055860.1-201ENST00000525523 BIVM-ERCC5R4GMW8 1640 aa13.73□□□□□ -0.21
AC055860.1-201ENST00000525523 GLI2P10070 1586 aa13.71□□□□□ -0.21
AC055860.1-201ENST00000525523 TOP2BQ02880 1626 aa13.71□□□□□ -0.22
AC055860.1-201ENST00000525523 JPH4Q96JJ6 628 aa13.7□□□□□ -0.22
AC055860.1-201ENST00000525523 MAP3K4Q9Y6R4 1608 aa13.64□□□□□ -0.23
AC055860.1-201ENST00000525523 CUL7Q14999 1698 aa13.63□□□□□ -0.23
AC055860.1-201ENST00000525523 PLB1Q6P1J6 1458 aa13.62□□□□□ -0.23
AC055860.1-201ENST00000525523 TEX14Q8IWB6 1497 aa13.62□□□□□ -0.23
AC055860.1-201ENST00000525523 LMTK3Q96Q04 1460 aa13.62□□□□□ -0.23
AC055860.1-201ENST00000525523 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
AC055860.1-201ENST00000525523 ABCC2Q92887 1545 aa13.62□□□□□ -0.23
AC055860.1-201ENST00000525523 ASXL2Q76L83 1435 aa13.6□□□□□ -0.23
AC055860.1-201ENST00000525523 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
AC055860.1-201ENST00000525523 KIAA0586Q9BVV6 1533 aa13.59□□□□□ -0.23
AC055860.1-201ENST00000525523 COL17A1Q9UMD9 1497 aaPredicted RBP13.58□□□□□ -0.24
AC055860.1-201ENST00000525523 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
AC055860.1-201ENST00000525523 PTPRGP23470 1445 aa13.53□□□□□ -0.24
AC055860.1-201ENST00000525523 UHRF1BP1LA0JNW5 1464 aa13.53□□□□□ -0.24
AC055860.1-201ENST00000525523 EPRSP07814 1512 aaKnown RBP13.53□□□□□ -0.24
AC055860.1-201ENST00000525523 KIF21BO75037 1637 aa13.53□□□□□ -0.24
AC055860.1-201ENST00000525523 ZCCHC11Q5TAX3 1644 aaKnown RBP13.49□□□□□ -0.25
AC055860.1-201ENST00000525523 CARMIL2Q6F5E8 1435 aa13.47□□□□□ -0.25
AC055860.1-201ENST00000525523 TNIKQ9UKE5 1360 aa13.47□□□□□ -0.25
AC055860.1-201ENST00000525523 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
AC055860.1-201ENST00000525523 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
AC055860.1-201ENST00000525523 PCF11O94913 1555 aaKnown RBP13.46□□□□□ -0.25
AC055860.1-201ENST00000525523 KDM5BQ9UGL1 1544 aa13.46□□□□□ -0.25
AC055860.1-201ENST00000525523 SOCS7O14512 581 aa13.44□□□□□ -0.26
AC055860.1-201ENST00000525523 UACAQ9BZF9 1416 aa13.44□□□□□ -0.26
AC055860.1-201ENST00000525523 ADAMTSL3P82987 1691 aa13.44□□□□□ -0.26
AC055860.1-201ENST00000525523 IQGAP2Q13576 1575 aa13.43□□□□□ -0.26
AC055860.1-201ENST00000525523 PTPRMP28827 1452 aa13.42□□□□□ -0.26
AC055860.1-201ENST00000525523 MAGI3Q5TCQ9 1506 aa13.41□□□□□ -0.26
AC055860.1-201ENST00000525523 WDR7Q9Y4E6 1490 aa13.41□□□□□ -0.26
AC055860.1-201ENST00000525523 SPATA31D1Q6ZQQ2 1576 aa13.38□□□□□ -0.27
AC055860.1-201ENST00000525523 DISP3Q9P2K9 1392 aa13.38□□□□□ -0.27
AC055860.1-201ENST00000525523 TTBK1Q5TCY1 1321 aaPredicted RBP13.38□□□□□ -0.27
AC055860.1-201ENST00000525523 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
AC055860.1-201ENST00000525523 MADDQ8WXG6 1647 aa13.35□□□□□ -0.27
AC055860.1-201ENST00000525523 DISP1Q96F81 1524 aa13.34□□□□□ -0.27
AC055860.1-201ENST00000525523 ILDR2Q71H61 639 aa13.34□□□□□ -0.27
AC055860.1-201ENST00000525523 CD109Q6YHK3 1445 aa13.33□□□□□ -0.28
AC055860.1-201ENST00000525523 KIAA0556O60303 1618 aa13.33□□□□□ -0.28
AC055860.1-201ENST00000525523 C1QBPQ07021 282 aaKnown RBP13.33□□□□□ -0.28
AC055860.1-201ENST00000525523 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
AC055860.1-201ENST00000525523 ARAP3Q8WWN8 1544 aa13.32□□□□□ -0.28
AC055860.1-201ENST00000525523 IGF1RP08069 1367 aa13.32□□□□□ -0.28
AC055860.1-201ENST00000525523 RIMS1Q86UR5 1692 aaKnown RBP13.31□□□□□ -0.28
AC055860.1-201ENST00000525523 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
AC055860.1-201ENST00000525523 CERKQ8TCT0 537 aa13.27□□□□□ -0.29
AC055860.1-201ENST00000525523 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
AC055860.1-201ENST00000525523 ARHGEF40Q8TER5 1519 aa13.23□□□□□ -0.29
AC055860.1-201ENST00000525523 KCNA4P22459 653 aa13.22□□□□□ -0.29
AC055860.1-201ENST00000525523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.29
AC055860.1-201ENST00000525523 ABCA8O94911 1581 aa13.21□□□□□ -0.29
AC055860.1-201ENST00000525523 FRMPD1Q5SYB0 1578 aa13.21□□□□□ -0.29
AC055860.1-201ENST00000525523 ABCA9Q8IUA7 1624 aa13.21□□□□□ -0.3
AC055860.1-201ENST00000525523 PHLDB1Q86UU1 1377 aa13.2□□□□□ -0.3
AC055860.1-201ENST00000525523 CTTNBP2Q8WZ74 1663 aa13.2□□□□□ -0.3
AC055860.1-201ENST00000525523 PREX1Q8TCU6 1659 aa13.18□□□□□ -0.3
AC055860.1-201ENST00000525523 FER1L4A9Z1Z3 1794 aa13.17□□□□□ -0.3
AC055860.1-201ENST00000525523 NEO1Q92859 1461 aa13.16□□□□□ -0.3
AC055860.1-201ENST00000525523 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
AC055860.1-201ENST00000525523 HSPA2P54652 639 aa13.15□□□□□ -0.3
AC055860.1-201ENST00000525523 ARID4BQ4LE39 1312 aaPredicted RBP13.14□□□□□ -0.31
AC055860.1-201ENST00000525523 KCNH8Q96L42 1107 aa13.14□□□□□ -0.31
AC055860.1-201ENST00000525523 FANCAO15360 1455 aa13.14□□□□□ -0.31
AC055860.1-201ENST00000525523 RICTORQ6R327 1708 aa13.13□□□□□ -0.31
AC055860.1-201ENST00000525523 GOLGA3Q08378 1498 aa13.13□□□□□ -0.31
AC055860.1-201ENST00000525523 POGZQ7Z3K3 1410 aa13.12□□□□□ -0.31
AC055860.1-201ENST00000525523 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms