RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 KIF27Q86VH2 1401 aa16.91■□□□□ 0.3
CNKSR1-209ENST00000524529 CUL7Q14999 1698 aa16.9■□□□□ 0.3
CNKSR1-209ENST00000524529 KIF13AQ9H1H9 1805 aa16.87■□□□□ 0.29
CNKSR1-209ENST00000524529 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
CNKSR1-209ENST00000524529 KIAA0586Q9BVV6 1533 aa16.86■□□□□ 0.29
CNKSR1-209ENST00000524529 ADCY10Q96PN6 1610 aa16.81■□□□□ 0.28
CNKSR1-209ENST00000524529 CARMIL1Q5VZK9 1371 aa16.81■□□□□ 0.28
CNKSR1-209ENST00000524529 MAPKBP1O60336 1514 aa16.74■□□□□ 0.27
CNKSR1-209ENST00000524529 ABCC10Q5T3U5 1492 aa16.72■□□□□ 0.27
CNKSR1-209ENST00000524529 IQGAP2Q13576 1575 aa16.71■□□□□ 0.27
CNKSR1-209ENST00000524529 DIP2BQ9P265 1576 aa16.71■□□□□ 0.27
CNKSR1-209ENST00000524529 PTPRGP23470 1445 aa16.68■□□□□ 0.26
CNKSR1-209ENST00000524529 FAM69CQ0P6D2 419 aa16.67■□□□□ 0.26
CNKSR1-209ENST00000524529 DISP1Q96F81 1524 aa16.66■□□□□ 0.26
CNKSR1-209ENST00000524529 NPM1P06748 294 aaKnown RBP eCLIP16.66■□□□□ 0.26
CNKSR1-209ENST00000524529 RAPGEF2Q9Y4G8 1499 aa16.66■□□□□ 0.26
CNKSR1-209ENST00000524529 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.26
CNKSR1-209ENST00000524529 TTBK1Q5TCY1 1321 aaPredicted RBP16.64■□□□□ 0.25
CNKSR1-209ENST00000524529 CARMIL2Q6F5E8 1435 aa16.63■□□□□ 0.25
CNKSR1-209ENST00000524529 TSPOAP1O95153 1857 aa16.63■□□□□ 0.25
CNKSR1-209ENST00000524529 UGGT2Q9NYU1 1516 aa16.61■□□□□ 0.25
CNKSR1-209ENST00000524529 ABCC2Q92887 1545 aa16.6■□□□□ 0.25
CNKSR1-209ENST00000524529 UHRF1BP1LA0JNW5 1464 aa16.58■□□□□ 0.24
CNKSR1-209ENST00000524529 KIAA0556O60303 1618 aa16.58■□□□□ 0.24
CNKSR1-209ENST00000524529 CTTNBP2Q8WZ74 1663 aa16.57■□□□□ 0.24
CNKSR1-209ENST00000524529 UACAQ9BZF9 1416 aa16.56■□□□□ 0.24
CNKSR1-209ENST00000524529 PPRC1Q5VV67 1664 aaKnown RBP16.55■□□□□ 0.24
CNKSR1-209ENST00000524529 ASXL2Q76L83 1435 aa16.54■□□□□ 0.24
CNKSR1-209ENST00000524529 PRXQ9BXM0 1461 aa16.53■□□□□ 0.24
CNKSR1-209ENST00000524529 KDM6BO15054 1643 aa16.52■□□□□ 0.24
CNKSR1-209ENST00000524529 KDM5BQ9UGL1 1544 aa16.52■□□□□ 0.24
CNKSR1-209ENST00000524529 ZCCHC11Q5TAX3 1644 aaKnown RBP16.51■□□□□ 0.23
CNKSR1-209ENST00000524529 GLI2P10070 1586 aa16.51■□□□□ 0.23
CNKSR1-209ENST00000524529 PLB1Q6P1J6 1458 aa16.5■□□□□ 0.23
CNKSR1-209ENST00000524529 EPRSP07814 1512 aaKnown RBP16.45■□□□□ 0.22
CNKSR1-209ENST00000524529 MAP3K4Q9Y6R4 1608 aa16.45■□□□□ 0.22
CNKSR1-209ENST00000524529 ABCA8O94911 1581 aa16.43■□□□□ 0.22
CNKSR1-209ENST00000524529 COL17A1Q9UMD9 1497 aaPredicted RBP16.42■□□□□ 0.22
CNKSR1-209ENST00000524529 KDM4FA0A1W2PPD8 638 aa16.41■□□□□ 0.22
CNKSR1-209ENST00000524529 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
CNKSR1-209ENST00000524529 WDR7Q9Y4E6 1490 aa16.38■□□□□ 0.21
CNKSR1-209ENST00000524529 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
CNKSR1-209ENST00000524529 SAMD9Q5K651 1589 aa16.34■□□□□ 0.21
CNKSR1-209ENST00000524529 P3H3Q8IVL6 736 aa16.33■□□□□ 0.2
CNKSR1-209ENST00000524529 TEX14Q8IWB6 1497 aa16.31■□□□□ 0.2
CNKSR1-209ENST00000524529 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
CNKSR1-209ENST00000524529 ATP10BO94823 1461 aa16.29■□□□□ 0.2
CNKSR1-209ENST00000524529 KCNH8Q96L42 1107 aa16.28■□□□□ 0.2
CNKSR1-209ENST00000524529 ARID3CA6NKF2 412 aa16.27■□□□□ 0.2
CNKSR1-209ENST00000524529 MAGI3Q5TCQ9 1506 aa16.27■□□□□ 0.2
CNKSR1-209ENST00000524529 EEA1Q15075 1411 aa16.27■□□□□ 0.19
CNKSR1-209ENST00000524529 CD109Q6YHK3 1445 aa16.27■□□□□ 0.19
CNKSR1-209ENST00000524529 RAPGEF6Q8TEU7 1601 aa16.25■□□□□ 0.19
CNKSR1-209ENST00000524529 ADGRL1O94910 1474 aa16.24■□□□□ 0.19
CNKSR1-209ENST00000524529 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
CNKSR1-209ENST00000524529 FHOD3Q2V2M9 1422 aa16.21■□□□□ 0.19
CNKSR1-209ENST00000524529 KIF21BO75037 1637 aa16.21■□□□□ 0.19
CNKSR1-209ENST00000524529 ILDR1Q86SU0 546 aaPredicted RBP16.2■□□□□ 0.18
CNKSR1-209ENST00000524529 NUP153P49790 1475 aaKnown RBP16.2■□□□□ 0.18
CNKSR1-209ENST00000524529 ABCA9Q8IUA7 1624 aa16.19■□□□□ 0.18
CNKSR1-209ENST00000524529 RANGAP1P46060 587 aaPredicted RBP16.19■□□□□ 0.18
CNKSR1-209ENST00000524529 ARAP3Q8WWN8 1544 aa16.14■□□□□ 0.18
CNKSR1-209ENST00000524529 HECW2Q9P2P5 1572 aa16.14■□□□□ 0.17
CNKSR1-209ENST00000524529 CHIC1Q5VXU3 224 aa16.13■□□□□ 0.17
CNKSR1-209ENST00000524529 EFCAB5A4FU69 1503 aa16.11■□□□□ 0.17
CNKSR1-209ENST00000524529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.09■□□□□ 0.17
CNKSR1-209ENST00000524529 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
CNKSR1-209ENST00000524529 EHMT2Q96KQ7 1210 aa16.08■□□□□ 0.16
CNKSR1-209ENST00000524529 FRMPD1Q5SYB0 1578 aa16.08■□□□□ 0.16
CNKSR1-209ENST00000524529 NEO1Q92859 1461 aa16.07■□□□□ 0.16
CNKSR1-209ENST00000524529 CDK13Q14004 1512 aaKnown RBP16.06■□□□□ 0.16
CNKSR1-209ENST00000524529 RAPGEF3O95398 923 aa16.06■□□□□ 0.16
CNKSR1-209ENST00000524529 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.05■□□□□ 0.16
CNKSR1-209ENST00000524529 PHLDB1Q86UU1 1377 aa16.05■□□□□ 0.16
CNKSR1-209ENST00000524529 TTC37Q6PGP7 1564 aa16.04■□□□□ 0.16
CNKSR1-209ENST00000524529 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
CNKSR1-209ENST00000524529 PLEKHD1A6NEE1 506 aa16.02■□□□□ 0.16
CNKSR1-209ENST00000524529 RICTORQ6R327 1708 aa16.02■□□□□ 0.15
CNKSR1-209ENST00000524529 UBTFP17480 764 aaKnown RBP16.01■□□□□ 0.15
CNKSR1-209ENST00000524529 ADAMTSL3P82987 1691 aa16■□□□□ 0.15
CNKSR1-209ENST00000524529 LRRIQ1Q96JM4 1722 aa15.99■□□□□ 0.15
CNKSR1-209ENST00000524529 FANCAO15360 1455 aa15.97■□□□□ 0.15
CNKSR1-209ENST00000524529 AKNAQ7Z591 1439 aa15.97■□□□□ 0.15
CNKSR1-209ENST00000524529 HECW1Q76N89 1606 aa15.96■□□□□ 0.15
CNKSR1-209ENST00000524529 BCORL1Q5H9F3 1711 aa15.96■□□□□ 0.15
CNKSR1-209ENST00000524529 FMN1Q68DA7 1419 aa15.95■□□□□ 0.14
CNKSR1-209ENST00000524529 SIGLEC1Q9BZZ2 1709 aa15.95■□□□□ 0.14
CNKSR1-209ENST00000524529 DENND4BO75064 1496 aaPredicted RBP15.95■□□□□ 0.14
CNKSR1-209ENST00000524529 CFAP74Q9C0B2 1584 aa15.95■□□□□ 0.14
CNKSR1-209ENST00000524529 ARHGEF40Q8TER5 1519 aa15.94■□□□□ 0.14
CNKSR1-209ENST00000524529 KIF14Q15058 1648 aa15.93■□□□□ 0.14
CNKSR1-209ENST00000524529 PTPRMP28827 1452 aa15.91■□□□□ 0.14
CNKSR1-209ENST00000524529 MADDQ8WXG6 1647 aa15.91■□□□□ 0.14
CNKSR1-209ENST00000524529 ZMYM4Q5VZL5 1548 aa15.91■□□□□ 0.14
CNKSR1-209ENST00000524529 PLCH2O75038 1416 aa15.91■□□□□ 0.14
CNKSR1-209ENST00000524529 ATP1B4Q9UN42 357 aaPredicted RBP15.9■□□□□ 0.14
CNKSR1-209ENST00000524529 MYO5CQ9NQX4 1742 aa15.9■□□□□ 0.14
CNKSR1-209ENST00000524529 YEATS2Q9ULM3 1422 aa15.89■□□□□ 0.13
CNKSR1-209ENST00000524529 PCF11O94913 1555 aaKnown RBP15.87■□□□□ 0.13
CNKSR1-209ENST00000524529 TROQ12816 1431 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms