RNA–Protein interactions for RNA: ENST00000524432.5

MACF1-227, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 4,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-227ENST00000524432 EIF4G2P78344 907 aaKnown RBP eCLIP23.92■■□□□ 1.422e-6■■■■■ 26.9
MACF1-227ENST00000524432 CARMIL1Q5VZK9 1371 aa23.91■■□□□ 1.42
MACF1-227ENST00000524432 CUX2O14529 1486 aa23.91■■□□□ 1.42
MACF1-227ENST00000524432 RAPGEF2Q9Y4G8 1499 aa23.89■■□□□ 1.41
MACF1-227ENST00000524432 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.88■■□□□ 1.411e-6■■■□□ 16
MACF1-227ENST00000524432 SUPT16HQ9Y5B9 1047 aaKnown RBP23.88■■□□□ 1.41
MACF1-227ENST00000524432 NPM2Q86SE8 214 aaKnown RBP23.85■■□□□ 1.41
MACF1-227ENST00000524432 TMC1Q8TDI8 760 aa23.85■■□□□ 1.41
MACF1-227ENST00000524432 CHMP7Q8WUX9 453 aaPredicted RBP23.8■■□□□ 1.4
MACF1-227ENST00000524432 TSPY4P0CV99 314 aa23.78■■□□□ 1.4
MACF1-227ENST00000524432 TSPY10P0CW01 314 aa23.78■■□□□ 1.4
MACF1-227ENST00000524432 RAB3GAP2Q9H2M9 1393 aa23.75■■□□□ 1.39
MACF1-227ENST00000524432 SMARCA4P51532 1647 aa23.74■■□□□ 1.39
MACF1-227ENST00000524432 CCDC136Q96JN2 1154 aa23.74■■□□□ 1.39
MACF1-227ENST00000524432 ANP32AP39687 249 aaKnown RBP23.71■■□□□ 1.39
MACF1-227ENST00000524432 KCNH8Q96L42 1107 aa23.7■■□□□ 1.38
MACF1-227ENST00000524432 SETD5Q9C0A6 1442 aa23.7■■□□□ 1.38
MACF1-227ENST00000524432 ATAD2BQ9ULI0 1458 aa23.7■■□□□ 1.38
MACF1-227ENST00000524432 RGL3Q3MIN7 710 aa23.68■■□□□ 1.38
MACF1-227ENST00000524432 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
MACF1-227ENST00000524432 FOXD1Q16676 465 aa23.67■■□□□ 1.38
MACF1-227ENST00000524432 CFDP1Q9UEE9 299 aaPredicted RBP23.66■■□□□ 1.38
MACF1-227ENST00000524432 BCL11AQ9H165 835 aa23.65■■□□□ 1.38
MACF1-227ENST00000524432 CHGAP10645 457 aaKnown RBP23.64■■□□□ 1.38
MACF1-227ENST00000524432 SMARCA2P51531 1590 aa23.64■■□□□ 1.38
MACF1-227ENST00000524432 CANXP27824 592 aaKnown RBP23.64■■□□□ 1.37
MACF1-227ENST00000524432 DHX57Q6P158 1386 aaKnown RBP23.63■■□□□ 1.37
MACF1-227ENST00000524432 TDRD9Q8NDG6 1382 aaKnown RBP23.6■■□□□ 1.37
MACF1-227ENST00000524432 NBR1Q14596 966 aa23.59■■□□□ 1.37
MACF1-227ENST00000524432 PLEKHD1A6NEE1 506 aa23.58■■□□□ 1.37
MACF1-227ENST00000524432 PPP1R15AO75807 674 aaPredicted RBP23.56■■□□□ 1.36
MACF1-227ENST00000524432 TIMELESSQ9UNS1 1208 aa23.54■■□□□ 1.36
MACF1-227ENST00000524432 HSPA5P11021 654 aaKnown RBP23.52■■□□□ 1.36
MACF1-227ENST00000524432 FHOD3Q2V2M9 1422 aa23.5■■□□□ 1.35
MACF1-227ENST00000524432 CARD11Q9BXL7 1154 aa23.5■■□□□ 1.35
MACF1-227ENST00000524432 ARHGAP35Q9NRY4 1499 aa23.49■■□□□ 1.35
MACF1-227ENST00000524432 B4GALNT3Q6L9W6 998 aa23.47■■□□□ 1.35
MACF1-227ENST00000524432 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
MACF1-227ENST00000524432 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
MACF1-227ENST00000524432 ANP32EQ9BTT0 268 aa23.45■■□□□ 1.34
MACF1-227ENST00000524432 CCER2I3L3R5 266 aa23.44■■□□□ 1.34
MACF1-227ENST00000524432 CADPSQ9ULU8 1353 aa23.44■■□□□ 1.34
MACF1-227ENST00000524432 ZBTB47Q9UFB7 747 aaPredicted RBP23.42■■□□□ 1.34
MACF1-227ENST00000524432 WDR43Q15061 677 aaKnown RBP eCLIP23.39■■□□□ 1.34
MACF1-227ENST00000524432 MPHOSPH9Q99550 1183 aa23.38■■□□□ 1.33
MACF1-227ENST00000524432 TSHZ2Q9NRE2 1034 aa23.36■■□□□ 1.33
MACF1-227ENST00000524432 DCAF11Q8TEB1 546 aa23.35■■□□□ 1.33
MACF1-227ENST00000524432 L3MBTL2Q969R5 705 aa23.35■■□□□ 1.33
MACF1-227ENST00000524432 PPP4R2Q9NY27 417 aa23.35■■□□□ 1.33
MACF1-227ENST00000524432 RBM19Q9Y4C8 960 aaKnown RBP23.35■■□□□ 1.33
MACF1-227ENST00000524432 IGF1RP08069 1367 aa23.33■■□□□ 1.33
MACF1-227ENST00000524432 KIF21BO75037 1637 aa23.31■■□□□ 1.32
MACF1-227ENST00000524432 PKD2Q13563 968 aa23.3■■□□□ 1.32
MACF1-227ENST00000524432 FMN1Q68DA7 1419 aa23.3■■□□□ 1.32
MACF1-227ENST00000524432 CC2D1BQ5T0F9 858 aaKnown RBP23.27■■□□□ 1.31
MACF1-227ENST00000524432 NEFMP07197 916 aa23.24■■□□□ 1.31
MACF1-227ENST00000524432 SYNJ1O43426 1573 aa23.24■■□□□ 1.31
MACF1-227ENST00000524432 SLC24A1O60721 1099 aa23.23■■□□□ 1.31
MACF1-227ENST00000524432 NPM1P06748 294 aaKnown RBP eCLIP23.22■■□□□ 1.31
MACF1-227ENST00000524432 ARAP1Q96P48 1450 aa23.2■■□□□ 1.3
MACF1-227ENST00000524432 PHLDB1Q86UU1 1377 aa23.2■■□□□ 1.3
MACF1-227ENST00000524432 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.19■■□□□ 1.3
MACF1-227ENST00000524432 STAG3Q9UJ98 1225 aa23.19■■□□□ 1.3
MACF1-227ENST00000524432 KNSTRNQ9Y448 316 aa23.18■■□□□ 1.3
MACF1-227ENST00000524432 NEUROD2Q15784 382 aa23.14■■□□□ 1.3
MACF1-227ENST00000524432 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
MACF1-227ENST00000524432 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
MACF1-227ENST00000524432 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
MACF1-227ENST00000524432 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
MACF1-227ENST00000524432 PLPPR3Q6T4P5 718 aa23.09■■□□□ 1.29
MACF1-227ENST00000524432 NUP155O75694 1391 aa23.09■■□□□ 1.29
MACF1-227ENST00000524432 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
MACF1-227ENST00000524432 TNNT2P45379 298 aaPredicted RBP23.09■■□□□ 1.29
MACF1-227ENST00000524432 ARXQ96QS3 562 aa23.07■■□□□ 1.28
MACF1-227ENST00000524432 UPF2Q9HAU5 1272 aaKnown RBP23.04■■□□□ 1.28
MACF1-227ENST00000524432 HNRNPMP52272 730 aaKnown RBP eCLIP23.04■■□□□ 1.28
MACF1-227ENST00000524432 LAS1LQ9Y4W2 734 aaKnown RBP23.03■■□□□ 1.28
MACF1-227ENST00000524432 RGS3P49796 1198 aa23.03■■□□□ 1.28
MACF1-227ENST00000524432 CCDC18Q5T9S5 1454 aa23.01■■□□□ 1.27
MACF1-227ENST00000524432 NCAPD3P42695 1498 aa23.01■■□□□ 1.27
MACF1-227ENST00000524432 PRKRIP1Q9H875 184 aaPredicted RBP23■■□□□ 1.27
MACF1-227ENST00000524432 PRXQ9BXM0 1461 aa23■■□□□ 1.27
MACF1-227ENST00000524432 ZNF644Q9H582 1327 aaPredicted RBP23■■□□□ 1.27
MACF1-227ENST00000524432 NOP58Q9Y2X3 529 aaKnown RBP22.99■■□□□ 1.27
MACF1-227ENST00000524432 LRRC9Q6ZRR7 1453 aa22.99■■□□□ 1.27
MACF1-227ENST00000524432 TMF1P82094 1093 aa22.98■■□□□ 1.27
MACF1-227ENST00000524432 ESF1Q9H501 851 aaKnown RBP22.97■■□□□ 1.27
MACF1-227ENST00000524432 CDCA8Q53HL2 280 aa22.96■■□□□ 1.27
MACF1-227ENST00000524432 HSP90AA1P07900 732 aaKnown RBP22.96■■□□□ 1.27
MACF1-227ENST00000524432 RRBP1Q9P2E9 1410 aaKnown RBP22.95■■□□□ 1.26
MACF1-227ENST00000524432 EIF5BO60841 1220 aaKnown RBP22.95■■□□□ 1.26
MACF1-227ENST00000524432 ST20-MTHFSA0A0A6YYL1 179 aa22.94■■□□□ 1.26
MACF1-227ENST00000524432 FRAT1Q92837 279 aaPredicted RBP22.94■■□□□ 1.26
MACF1-227ENST00000524432 FGD6Q6ZV73 1430 aa22.93■■□□□ 1.26
MACF1-227ENST00000524432 JPH4Q96JJ6 628 aa22.93■■□□□ 1.26
MACF1-227ENST00000524432 ANKRD30AQ9BXX3 1397 aa22.92■■□□□ 1.26
MACF1-227ENST00000524432 ROCK2O75116 1388 aaKnown RBP22.9■■□□□ 1.26
MACF1-227ENST00000524432 PPM1GO15355 546 aaPredicted RBP22.9■■□□□ 1.26
MACF1-227ENST00000524432 RCAN3Q9UKA8 241 aa22.89■■□□□ 1.25
MACF1-227ENST00000524432 NUDCQ9Y266 331 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms