RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 KIAA0586Q9BVV6 1533 aa32.68■■■□□ 2.82
FBXO28-205ENST00000523990 PRG4Q92954 1404 aaPredicted RBP32.66■■■□□ 2.82
FBXO28-205ENST00000523990 JPH4Q96JJ6 628 aa32.64■■■□□ 2.82
FBXO28-205ENST00000523990 RAPGEF2Q9Y4G8 1499 aa32.57■■■□□ 2.8
FBXO28-205ENST00000523990 IQGAP2Q13576 1575 aa32.54■■■□□ 2.8
FBXO28-205ENST00000523990 CTTNBP2Q8WZ74 1663 aa32.45■■■□□ 2.78
FBXO28-205ENST00000523990 PRXQ9BXM0 1461 aa32.41■■■□□ 2.78
FBXO28-205ENST00000523990 TRHP20396 242 aaPredicted RBP32.35■■■□□ 2.77
FBXO28-205ENST00000523990 UGGT2Q9NYU1 1516 aa32.33■■■□□ 2.77
FBXO28-205ENST00000523990 ADCY10Q96PN6 1610 aa32.33■■■□□ 2.77
FBXO28-205ENST00000523990 CARMIL2Q6F5E8 1435 aa32.3■■■□□ 2.76
FBXO28-205ENST00000523990 DISP1Q96F81 1524 aa32.29■■■□□ 2.76
FBXO28-205ENST00000523990 EEA1Q15075 1411 aa32.27■■■□□ 2.76
FBXO28-205ENST00000523990 KIAA0556O60303 1618 aa32.24■■■□□ 2.75
FBXO28-205ENST00000523990 TNIKQ9UKE5 1360 aa32.22■■■□□ 2.75
FBXO28-205ENST00000523990 PTPRGP23470 1445 aa32.2■■■□□ 2.74
FBXO28-205ENST00000523990 CSRNP3Q8WYN3 585 aa32.18■■■□□ 2.74
FBXO28-205ENST00000523990 KIF13AQ9H1H9 1805 aa32.17■■■□□ 2.74
FBXO28-205ENST00000523990 MAPKBP1O60336 1514 aa32.15■■■□□ 2.74
FBXO28-205ENST00000523990 CHIC1Q5VXU3 224 aa32.15■■■□□ 2.74
FBXO28-205ENST00000523990 TTBK1Q5TCY1 1321 aaPredicted RBP32.07■■■□□ 2.72
FBXO28-205ENST00000523990 GOLGA3Q08378 1498 aa32.07■■■□□ 2.72
FBXO28-205ENST00000523990 KIF21BO75037 1637 aa32.06■■■□□ 2.72
FBXO28-205ENST00000523990 UHRF1BP1LA0JNW5 1464 aa32.05■■■□□ 2.72
FBXO28-205ENST00000523990 NPM1P06748 294 aaKnown RBP eCLIP32.04■■■□□ 2.72
FBXO28-205ENST00000523990 ABCC2Q92887 1545 aa32.04■■■□□ 2.72
FBXO28-205ENST00000523990 DIP2BQ9P265 1576 aa32.01■■■□□ 2.72
FBXO28-205ENST00000523990 UACAQ9BZF9 1416 aa32.01■■■□□ 2.72
FBXO28-205ENST00000523990 FAM9AQ8IZU1 332 aaPredicted RBP32■■■□□ 2.71
FBXO28-205ENST00000523990 ABCC10Q5T3U5 1492 aa31.99■■■□□ 2.71
FBXO28-205ENST00000523990 SAMD9Q5K651 1589 aa31.96■■■□□ 2.71
FBXO28-205ENST00000523990 ZCCHC11Q5TAX3 1644 aaKnown RBP31.91■■■□□ 2.7
FBXO28-205ENST00000523990 KDM5BQ9UGL1 1544 aa31.9■■■□□ 2.7
FBXO28-205ENST00000523990 ABCA8O94911 1581 aa31.89■■■□□ 2.7
FBXO28-205ENST00000523990 PLB1Q6P1J6 1458 aa31.88■■■□□ 2.69
FBXO28-205ENST00000523990 ASXL2Q76L83 1435 aa31.83■■■□□ 2.69
FBXO28-205ENST00000523990 FAM69CQ0P6D2 419 aa31.82■■■□□ 2.68
FBXO28-205ENST00000523990 TSPOAP1O95153 1857 aa31.77■■■□□ 2.68
FBXO28-205ENST00000523990 GLI2P10070 1586 aa31.75■■■□□ 2.67
FBXO28-205ENST00000523990 P3H3Q8IVL6 736 aa31.73■■■□□ 2.67
FBXO28-205ENST00000523990 EFCAB5A4FU69 1503 aa31.72■■■□□ 2.67
FBXO28-205ENST00000523990 RAPGEF6Q8TEU7 1601 aa31.68■■■□□ 2.66
FBXO28-205ENST00000523990 EPRSP07814 1512 aaKnown RBP31.67■■■□□ 2.66
FBXO28-205ENST00000523990 PPRC1Q5VV67 1664 aaKnown RBP31.66■■■□□ 2.66
FBXO28-205ENST00000523990 WDR7Q9Y4E6 1490 aa31.66■■■□□ 2.66
FBXO28-205ENST00000523990 FHOD3Q2V2M9 1422 aa31.65■■■□□ 2.66
FBXO28-205ENST00000523990 MAP3K4Q9Y6R4 1608 aa31.64■■■□□ 2.66
FBXO28-205ENST00000523990 RANGAP1P46060 587 aaPredicted RBP31.63■■■□□ 2.65
FBXO28-205ENST00000523990 EHMT2Q96KQ7 1210 aa31.6■■■□□ 2.65
FBXO28-205ENST00000523990 UBTFP17480 764 aaKnown RBP31.58■■■□□ 2.65
FBXO28-205ENST00000523990 ATP10BO94823 1461 aa31.56■■■□□ 2.64
FBXO28-205ENST00000523990 KDM6BO15054 1643 aa31.55■■■□□ 2.64
FBXO28-205ENST00000523990 NUP153P49790 1475 aaKnown RBP31.52■■■□□ 2.64
FBXO28-205ENST00000523990 CFAP43Q8NDM7 1665 aa31.51■■■□□ 2.64
FBXO28-205ENST00000523990 ARHGAP35Q9NRY4 1499 aa31.49■■■□□ 2.63
FBXO28-205ENST00000523990 ARID3CA6NKF2 412 aa31.46■■■□□ 2.63
FBXO28-205ENST00000523990 TEX14Q8IWB6 1497 aa31.41■■■□□ 2.62
FBXO28-205ENST00000523990 KCNH8Q96L42 1107 aa31.36■■■□□ 2.61
FBXO28-205ENST00000523990 ABCA9Q8IUA7 1624 aa31.36■■■□□ 2.61
FBXO28-205ENST00000523990 FMN1Q68DA7 1419 aa31.36■■■□□ 2.61
FBXO28-205ENST00000523990 MAGI3Q5TCQ9 1506 aa31.34■■■□□ 2.61
FBXO28-205ENST00000523990 CD109Q6YHK3 1445 aa31.33■■■□□ 2.61
FBXO28-205ENST00000523990 HECW1Q76N89 1606 aa31.33■■■□□ 2.61
FBXO28-205ENST00000523990 CDK13Q14004 1512 aaKnown RBP31.28■■■□□ 2.6
FBXO28-205ENST00000523990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.27■■■□□ 2.6
FBXO28-205ENST00000523990 HNRNPUL2Q1KMD3 747 aaKnown RBP31.27■■■□□ 2.6
FBXO28-205ENST00000523990 COL17A1Q9UMD9 1497 aaPredicted RBP31.26■■■□□ 2.59
FBXO28-205ENST00000523990 LRRIQ1Q96JM4 1722 aa31.25■■■□□ 2.59
FBXO28-205ENST00000523990 PCF11O94913 1555 aaKnown RBP31.19■■■□□ 2.58
FBXO28-205ENST00000523990 CLIP1P30622 1438 aa31.15■■■□□ 2.58
FBXO28-205ENST00000523990 PLEKHD1A6NEE1 506 aa31.15■■■□□ 2.58
FBXO28-205ENST00000523990 TTC37Q6PGP7 1564 aa31.14■■■□□ 2.58
FBXO28-205ENST00000523990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.13■■■□□ 2.57
FBXO28-205ENST00000523990 CASKIN1Q8WXD9 1431 aa31.09■■■□□ 2.57
FBXO28-205ENST00000523990 ATP1B4Q9UN42 357 aaPredicted RBP31.08■■■□□ 2.57
FBXO28-205ENST00000523990 ARAP3Q8WWN8 1544 aa31.08■■■□□ 2.57
FBXO28-205ENST00000523990 NEO1Q92859 1461 aa31.06■■■□□ 2.56
FBXO28-205ENST00000523990 FYCO1Q9BQS8 1478 aa31.04■■■□□ 2.56
FBXO28-205ENST00000523990 CFAP74Q9C0B2 1584 aa31.04■■■□□ 2.56
FBXO28-205ENST00000523990 CCDC18Q5T9S5 1454 aa31.03■■■□□ 2.56
FBXO28-205ENST00000523990 KIF14Q15058 1648 aa31.02■■■□□ 2.56
FBXO28-205ENST00000523990 PHLDB1Q86UU1 1377 aa31.02■■■□□ 2.56
FBXO28-205ENST00000523990 MYO5CQ9NQX4 1742 aa31■■■□□ 2.55
FBXO28-205ENST00000523990 TROQ12816 1431 aaPredicted RBP30.97■■■□□ 2.55
FBXO28-205ENST00000523990 CEP162Q5TB80 1403 aa30.97■■■□□ 2.55
FBXO28-205ENST00000523990 CDK11AQ9UQ88 783 aaPredicted RBP30.96■■■□□ 2.55
FBXO28-205ENST00000523990 FRMPD1Q5SYB0 1578 aa30.96■■■□□ 2.55
FBXO28-205ENST00000523990 FANCAO15360 1455 aa30.94■■■□□ 2.54
FBXO28-205ENST00000523990 RICTORQ6R327 1708 aa30.92■■■□□ 2.54
FBXO28-205ENST00000523990 AEBP2Q6ZN18 517 aaPredicted RBP30.9■■■□□ 2.54
FBXO28-205ENST00000523990 PLCH2O75038 1416 aa30.88■■■□□ 2.53
FBXO28-205ENST00000523990 AKNAQ7Z591 1439 aa30.88■■■□□ 2.53
FBXO28-205ENST00000523990 CDC42BPBQ9Y5S2 1711 aa30.82■■■□□ 2.53
FBXO28-205ENST00000523990 KDM4FA0A1W2PPD8 638 aa30.82■■■□□ 2.52
FBXO28-205ENST00000523990 ADGRL1O94910 1474 aa30.82■■■□□ 2.52
FBXO28-205ENST00000523990 RAPGEF3O95398 923 aa30.81■■■□□ 2.52
FBXO28-205ENST00000523990 LOC105371045A0A1W2PR82 267 aa30.81■■■□□ 2.52
FBXO28-205ENST00000523990 DENND4BO75064 1496 aaPredicted RBP30.81■■■□□ 2.52
FBXO28-205ENST00000523990 PREX2Q70Z35 1606 aa30.8■■■□□ 2.52
FBXO28-205ENST00000523990 CDC42BPAQ5VT25 1732 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms