RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 RUSC2Q8N2Y8 1516 aa29.18■■■□□ 2.26
SPIDR-221ENST00000523814 CUL7Q14999 1698 aa29.14■■■□□ 2.26
SPIDR-221ENST00000523814 KIAA0586Q9BVV6 1533 aa29.14■■■□□ 2.25
SPIDR-221ENST00000523814 CARMIL1Q5VZK9 1371 aa29.09■■■□□ 2.25
SPIDR-221ENST00000523814 NPM1P06748 294 aaKnown RBP eCLIP28.95■■■□□ 2.22
SPIDR-221ENST00000523814 ADCY10Q96PN6 1610 aa28.87■■■□□ 2.21
SPIDR-221ENST00000523814 PTPRGP23470 1445 aa28.86■■■□□ 2.21
SPIDR-221ENST00000523814 MAPKBP1O60336 1514 aa28.84■■■□□ 2.21
SPIDR-221ENST00000523814 CARMIL2Q6F5E8 1435 aa28.83■■■□□ 2.21
SPIDR-221ENST00000523814 KIF13AQ9H1H9 1805 aa28.83■■■□□ 2.21
SPIDR-221ENST00000523814 ABCC10Q5T3U5 1492 aa28.82■■■□□ 2.2
SPIDR-221ENST00000523814 RAPGEF2Q9Y4G8 1499 aa28.81■■■□□ 2.2
SPIDR-221ENST00000523814 FAM69CQ0P6D2 419 aa28.81■■■□□ 2.2
SPIDR-221ENST00000523814 IQGAP2Q13576 1575 aa28.8■■■□□ 2.2
SPIDR-221ENST00000523814 TNIKQ9UKE5 1360 aa28.8■■■□□ 2.2
SPIDR-221ENST00000523814 TTBK1Q5TCY1 1321 aaPredicted RBP28.72■■■□□ 2.19
SPIDR-221ENST00000523814 DISP1Q96F81 1524 aa28.7■■■□□ 2.19
SPIDR-221ENST00000523814 DIP2BQ9P265 1576 aa28.68■■■□□ 2.18
SPIDR-221ENST00000523814 UGGT2Q9NYU1 1516 aa28.67■■■□□ 2.18
SPIDR-221ENST00000523814 ABCC2Q92887 1545 aa28.65■■■□□ 2.18
SPIDR-221ENST00000523814 UHRF1BP1LA0JNW5 1464 aa28.64■■■□□ 2.17
SPIDR-221ENST00000523814 UACAQ9BZF9 1416 aa28.61■■■□□ 2.17
SPIDR-221ENST00000523814 AEBP2Q6ZN18 517 aaPredicted RBP28.59■■■□□ 2.17
SPIDR-221ENST00000523814 PRXQ9BXM0 1461 aa28.57■■■□□ 2.16
SPIDR-221ENST00000523814 PLB1Q6P1J6 1458 aa28.54■■■□□ 2.16
SPIDR-221ENST00000523814 ASXL2Q76L83 1435 aa28.54■■■□□ 2.16
SPIDR-221ENST00000523814 KIAA0556O60303 1618 aa28.53■■■□□ 2.16
SPIDR-221ENST00000523814 KDM5BQ9UGL1 1544 aa28.49■■■□□ 2.15
SPIDR-221ENST00000523814 CTTNBP2Q8WZ74 1663 aa28.47■■■□□ 2.15
SPIDR-221ENST00000523814 GOLGA3Q08378 1498 aa28.46■■■□□ 2.15
SPIDR-221ENST00000523814 GLI2P10070 1586 aa28.45■■■□□ 2.14
SPIDR-221ENST00000523814 TSPOAP1O95153 1857 aa28.42■■■□□ 2.14
SPIDR-221ENST00000523814 CSRNP3Q8WYN3 585 aa28.42■■■□□ 2.14
SPIDR-221ENST00000523814 KDM6BO15054 1643 aa28.4■■■□□ 2.14
SPIDR-221ENST00000523814 ZCCHC11Q5TAX3 1644 aaKnown RBP28.36■■■□□ 2.13
SPIDR-221ENST00000523814 EPRSP07814 1512 aaKnown RBP28.36■■■□□ 2.13
SPIDR-221ENST00000523814 ABCA8O94911 1581 aa28.3■■■□□ 2.12
SPIDR-221ENST00000523814 PPRC1Q5VV67 1664 aaKnown RBP28.29■■■□□ 2.12
SPIDR-221ENST00000523814 EEA1Q15075 1411 aa28.27■■■□□ 2.12
SPIDR-221ENST00000523814 WDR7Q9Y4E6 1490 aa28.27■■■□□ 2.12
SPIDR-221ENST00000523814 MAP3K4Q9Y6R4 1608 aa28.25■■■□□ 2.11
SPIDR-221ENST00000523814 FAM9AQ8IZU1 332 aaPredicted RBP28.25■■■□□ 2.11
SPIDR-221ENST00000523814 P3H3Q8IVL6 736 aa28.23■■■□□ 2.11
SPIDR-221ENST00000523814 TEX14Q8IWB6 1497 aa28.2■■■□□ 2.1
SPIDR-221ENST00000523814 KCNH8Q96L42 1107 aa28.18■■■□□ 2.1
SPIDR-221ENST00000523814 COL17A1Q9UMD9 1497 aaPredicted RBP28.18■■■□□ 2.1
SPIDR-221ENST00000523814 KDM4FA0A1W2PPD8 638 aa28.16■■■□□ 2.1
SPIDR-221ENST00000523814 SAMD9Q5K651 1589 aa28.13■■■□□ 2.09
SPIDR-221ENST00000523814 CD109Q6YHK3 1445 aa28.11■■■□□ 2.09
SPIDR-221ENST00000523814 ATP10BO94823 1461 aa28.11■■■□□ 2.09
SPIDR-221ENST00000523814 MAGI3Q5TCQ9 1506 aa28.08■■■□□ 2.09
SPIDR-221ENST00000523814 ARID3CA6NKF2 412 aa28.07■■■□□ 2.08
SPIDR-221ENST00000523814 CFAP43Q8NDM7 1665 aa28.05■■■□□ 2.08
SPIDR-221ENST00000523814 RANGAP1P46060 587 aaPredicted RBP28.02■■■□□ 2.08
SPIDR-221ENST00000523814 CHIC1Q5VXU3 224 aa27.99■■■□□ 2.07
SPIDR-221ENST00000523814 KIF21BO75037 1637 aa27.99■■■□□ 2.07
SPIDR-221ENST00000523814 RAPGEF6Q8TEU7 1601 aa27.98■■■□□ 2.07
SPIDR-221ENST00000523814 FHOD3Q2V2M9 1422 aa27.95■■■□□ 2.07
SPIDR-221ENST00000523814 NUP153P49790 1475 aaKnown RBP27.93■■■□□ 2.06
SPIDR-221ENST00000523814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.92■■■□□ 2.06
SPIDR-221ENST00000523814 HNRNPUL2Q1KMD3 747 aaKnown RBP27.92■■■□□ 2.06
SPIDR-221ENST00000523814 ADGRL1O94910 1474 aa27.89■■■□□ 2.06
SPIDR-221ENST00000523814 ABCA9Q8IUA7 1624 aa27.89■■■□□ 2.05
SPIDR-221ENST00000523814 EFCAB5A4FU69 1503 aa27.88■■■□□ 2.05
SPIDR-221ENST00000523814 ARAP3Q8WWN8 1544 aa27.87■■■□□ 2.05
SPIDR-221ENST00000523814 PHLDB1Q86UU1 1377 aa27.87■■■□□ 2.05
SPIDR-221ENST00000523814 UBTFP17480 764 aaKnown RBP27.84■■■□□ 2.05
SPIDR-221ENST00000523814 PLEKHD1A6NEE1 506 aa27.83■■■□□ 2.05
SPIDR-221ENST00000523814 EHMT2Q96KQ7 1210 aa27.78■■■□□ 2.04
SPIDR-221ENST00000523814 NEO1Q92859 1461 aa27.76■■■□□ 2.04
SPIDR-221ENST00000523814 RAPGEF3O95398 923 aa27.72■■■□□ 2.03
SPIDR-221ENST00000523814 ARHGAP35Q9NRY4 1499 aa27.68■■■□□ 2.02
SPIDR-221ENST00000523814 FMN1Q68DA7 1419 aa27.67■■■□□ 2.02
SPIDR-221ENST00000523814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.64■■■□□ 2.02
SPIDR-221ENST00000523814 CDK13Q14004 1512 aaKnown RBP27.63■■■□□ 2.01
SPIDR-221ENST00000523814 AKNAQ7Z591 1439 aa27.6■■■□□ 2.01
SPIDR-221ENST00000523814 ATP1B4Q9UN42 357 aaPredicted RBP27.6■■■□□ 2.01
SPIDR-221ENST00000523814 FANCAO15360 1455 aa27.58■■■□□ 2.01
SPIDR-221ENST00000523814 FRMPD1Q5SYB0 1578 aa27.57■■■□□ 2
SPIDR-221ENST00000523814 CDK11AQ9UQ88 783 aaPredicted RBP27.56■■■□□ 2
SPIDR-221ENST00000523814 DENND4BO75064 1496 aaPredicted RBP27.56■■■□□ 2
SPIDR-221ENST00000523814 TTC37Q6PGP7 1564 aa27.56■■■□□ 2
SPIDR-221ENST00000523814 HECW1Q76N89 1606 aa27.55■■■□□ 2
SPIDR-221ENST00000523814 CFAP74Q9C0B2 1584 aa27.52■■■□□ 2
SPIDR-221ENST00000523814 PLCH2O75038 1416 aa27.52■■■□□ 2
SPIDR-221ENST00000523814 RICTORQ6R327 1708 aa27.47■■□□□ 1.99
SPIDR-221ENST00000523814 HECW2Q9P2P5 1572 aa27.45■■□□□ 1.99
SPIDR-221ENST00000523814 ADAMTSL3P82987 1691 aa27.45■■□□□ 1.98
SPIDR-221ENST00000523814 ARID4BQ4LE39 1312 aaPredicted RBP27.44■■□□□ 1.98
SPIDR-221ENST00000523814 EFCAB2Q5VUJ9 269 aa27.44■■□□□ 1.98
SPIDR-221ENST00000523814 TROQ12816 1431 aaPredicted RBP27.43■■□□□ 1.98
SPIDR-221ENST00000523814 SCAPERQ9BY12 1400 aa27.41■■□□□ 1.98
SPIDR-221ENST00000523814 ZMYM4Q5VZL5 1548 aa27.41■■□□□ 1.98
SPIDR-221ENST00000523814 ARHGEF40Q8TER5 1519 aa27.41■■□□□ 1.98
SPIDR-221ENST00000523814 PTPRMP28827 1452 aa27.4■■□□□ 1.98
SPIDR-221ENST00000523814 MAGI2Q86UL8 1455 aa27.4■■□□□ 1.98
SPIDR-221ENST00000523814 CASKIN1Q8WXD9 1431 aa27.4■■□□□ 1.98
SPIDR-221ENST00000523814 CLIP1P30622 1438 aa27.38■■□□□ 1.97
SPIDR-221ENST00000523814 BCORL1Q5H9F3 1711 aa27.38■■□□□ 1.97
SPIDR-221ENST00000523814 KIF14Q15058 1648 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms