RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 PRG4Q92954 1404 aaPredicted RBP16.26■□□□□ 0.19
PABPC1-222ENST00000523555 JPH4Q96JJ6 628 aa16.25■□□□□ 0.19
PABPC1-222ENST00000523555 KIAA0586Q9BVV6 1533 aa16.24■□□□□ 0.19
PABPC1-222ENST00000523555 RAPGEF2Q9Y4G8 1499 aa16.21■□□□□ 0.19
PABPC1-222ENST00000523555 IQGAP2Q13576 1575 aa16.18■□□□□ 0.18
PABPC1-222ENST00000523555 CTTNBP2Q8WZ74 1663 aa16.17■□□□□ 0.18
PABPC1-222ENST00000523555 PRXQ9BXM0 1461 aa16.15■□□□□ 0.18
PABPC1-222ENST00000523555 ADCY10Q96PN6 1610 aa16.1■□□□□ 0.17
PABPC1-222ENST00000523555 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
PABPC1-222ENST00000523555 DISP1Q96F81 1524 aa16.09■□□□□ 0.17
PABPC1-222ENST00000523555 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
PABPC1-222ENST00000523555 UGGT2Q9NYU1 1516 aa16.08■□□□□ 0.16
PABPC1-222ENST00000523555 KIAA0556O60303 1618 aa16.06■□□□□ 0.16
PABPC1-222ENST00000523555 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
PABPC1-222ENST00000523555 TTBK1Q5TCY1 1321 aaPredicted RBP16.04■□□□□ 0.16
PABPC1-222ENST00000523555 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
PABPC1-222ENST00000523555 KIF13AQ9H1H9 1805 aa16.03■□□□□ 0.16
PABPC1-222ENST00000523555 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.16
PABPC1-222ENST00000523555 TNIKQ9UKE5 1360 aa16.02■□□□□ 0.16
PABPC1-222ENST00000523555 EEA1Q15075 1411 aa16.02■□□□□ 0.15
PABPC1-222ENST00000523555 PTPRGP23470 1445 aa16.01■□□□□ 0.15
PABPC1-222ENST00000523555 KIF21BO75037 1637 aa15.97■□□□□ 0.15
PABPC1-222ENST00000523555 MAPKBP1O60336 1514 aa15.95■□□□□ 0.14
PABPC1-222ENST00000523555 ABCC2Q92887 1545 aa15.93■□□□□ 0.14
PABPC1-222ENST00000523555 SAMD9Q5K651 1589 aa15.92■□□□□ 0.14
PABPC1-222ENST00000523555 DIP2BQ9P265 1576 aa15.92■□□□□ 0.14
PABPC1-222ENST00000523555 UACAQ9BZF9 1416 aa15.92■□□□□ 0.14
PABPC1-222ENST00000523555 UHRF1BP1LA0JNW5 1464 aa15.91■□□□□ 0.14
PABPC1-222ENST00000523555 GOLGA3Q08378 1498 aa15.91■□□□□ 0.14
PABPC1-222ENST00000523555 PLB1Q6P1J6 1458 aa15.9■□□□□ 0.14
PABPC1-222ENST00000523555 ZCCHC11Q5TAX3 1644 aaKnown RBP15.9■□□□□ 0.14
PABPC1-222ENST00000523555 NPM1P06748 294 aaKnown RBP eCLIP15.89■□□□□ 0.13
PABPC1-222ENST00000523555 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
PABPC1-222ENST00000523555 ABCC10Q5T3U5 1492 aa15.89■□□□□ 0.13
PABPC1-222ENST00000523555 ABCA8O94911 1581 aa15.88■□□□□ 0.13
PABPC1-222ENST00000523555 P3H3Q8IVL6 736 aa15.87■□□□□ 0.13
PABPC1-222ENST00000523555 TSPOAP1O95153 1857 aa15.86■□□□□ 0.13
PABPC1-222ENST00000523555 KDM5BQ9UGL1 1544 aa15.86■□□□□ 0.13
PABPC1-222ENST00000523555 RANGAP1P46060 587 aaPredicted RBP15.85■□□□□ 0.13
PABPC1-222ENST00000523555 ASXL2Q76L83 1435 aa15.84■□□□□ 0.13
PABPC1-222ENST00000523555 FAM69CQ0P6D2 419 aa15.83■□□□□ 0.12
PABPC1-222ENST00000523555 FHOD3Q2V2M9 1422 aa15.8■□□□□ 0.12
PABPC1-222ENST00000523555 PPRC1Q5VV67 1664 aaKnown RBP15.79■□□□□ 0.12
PABPC1-222ENST00000523555 RAPGEF6Q8TEU7 1601 aa15.78■□□□□ 0.12
PABPC1-222ENST00000523555 GLI2P10070 1586 aa15.76■□□□□ 0.11
PABPC1-222ENST00000523555 EFCAB5A4FU69 1503 aa15.76■□□□□ 0.11
PABPC1-222ENST00000523555 EPRSP07814 1512 aaKnown RBP15.76■□□□□ 0.11
PABPC1-222ENST00000523555 UBTFP17480 764 aaKnown RBP15.75■□□□□ 0.11
PABPC1-222ENST00000523555 ARID3CA6NKF2 412 aa15.74■□□□□ 0.11
PABPC1-222ENST00000523555 MAP3K4Q9Y6R4 1608 aa15.74■□□□□ 0.11
PABPC1-222ENST00000523555 WDR7Q9Y4E6 1490 aa15.73■□□□□ 0.11
PABPC1-222ENST00000523555 ATP10BO94823 1461 aa15.72■□□□□ 0.11
PABPC1-222ENST00000523555 ARHGAP35Q9NRY4 1499 aa15.71■□□□□ 0.11
PABPC1-222ENST00000523555 NUP153P49790 1475 aaKnown RBP15.71■□□□□ 0.1
PABPC1-222ENST00000523555 KDM6BO15054 1643 aa15.68■□□□□ 0.1
PABPC1-222ENST00000523555 CFAP43Q8NDM7 1665 aa15.66■□□□□ 0.1
PABPC1-222ENST00000523555 LRRIQ1Q96JM4 1722 aa15.65■□□□□ 0.1
PABPC1-222ENST00000523555 KCNH8Q96L42 1107 aa15.64■□□□□ 0.09
PABPC1-222ENST00000523555 CDK13Q14004 1512 aaKnown RBP15.62■□□□□ 0.09
PABPC1-222ENST00000523555 COL17A1Q9UMD9 1497 aaPredicted RBP15.6■□□□□ 0.09
PABPC1-222ENST00000523555 ABCA9Q8IUA7 1624 aa15.6■□□□□ 0.09
PABPC1-222ENST00000523555 HECW1Q76N89 1606 aa15.58■□□□□ 0.09
PABPC1-222ENST00000523555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
PABPC1-222ENST00000523555 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
PABPC1-222ENST00000523555 CD109Q6YHK3 1445 aa15.58■□□□□ 0.08
PABPC1-222ENST00000523555 FMN1Q68DA7 1419 aa15.57■□□□□ 0.08
PABPC1-222ENST00000523555 MAGI3Q5TCQ9 1506 aa15.57■□□□□ 0.08
PABPC1-222ENST00000523555 PCF11O94913 1555 aaKnown RBP15.57■□□□□ 0.08
PABPC1-222ENST00000523555 TEX14Q8IWB6 1497 aa15.56■□□□□ 0.08
PABPC1-222ENST00000523555 TTC37Q6PGP7 1564 aa15.53■□□□□ 0.08
PABPC1-222ENST00000523555 CLIP1P30622 1438 aa15.52■□□□□ 0.08
PABPC1-222ENST00000523555 ATP1B4Q9UN42 357 aaPredicted RBP15.52■□□□□ 0.08
PABPC1-222ENST00000523555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.52■□□□□ 0.077e-8■□□□□ 10.3
PABPC1-222ENST00000523555 KIF14Q15058 1648 aa15.5■□□□□ 0.07
PABPC1-222ENST00000523555 LOC105371045A0A1W2PR82 267 aa15.48■□□□□ 0.07
PABPC1-222ENST00000523555 PLEKHD1A6NEE1 506 aa15.48■□□□□ 0.07
PABPC1-222ENST00000523555 CASKIN1Q8WXD9 1431 aa15.47■□□□□ 0.07
PABPC1-222ENST00000523555 CEP162Q5TB80 1403 aa15.46■□□□□ 0.07
PABPC1-222ENST00000523555 FYCO1Q9BQS8 1478 aa15.44■□□□□ 0.06
PABPC1-222ENST00000523555 ARAP3Q8WWN8 1544 aa15.43■□□□□ 0.06
PABPC1-222ENST00000523555 FRMPD1Q5SYB0 1578 aa15.43■□□□□ 0.06
PABPC1-222ENST00000523555 MYO5CQ9NQX4 1742 aa15.43■□□□□ 0.06
PABPC1-222ENST00000523555 NEO1Q92859 1461 aa15.41■□□□□ 0.06
PABPC1-222ENST00000523555 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
PABPC1-222ENST00000523555 CCDC18Q5T9S5 1454 aa15.4■□□□□ 0.06
PABPC1-222ENST00000523555 RICTORQ6R327 1708 aa15.4■□□□□ 0.06
PABPC1-222ENST00000523555 CFAP74Q9C0B2 1584 aa15.39■□□□□ 0.05
PABPC1-222ENST00000523555 FANCAO15360 1455 aa15.39■□□□□ 0.05
PABPC1-222ENST00000523555 CDC42BPBQ9Y5S2 1711 aa15.38■□□□□ 0.05
PABPC1-222ENST00000523555 RAPGEF3O95398 923 aa15.37■□□□□ 0.05
PABPC1-222ENST00000523555 PLCH2O75038 1416 aa15.36■□□□□ 0.05
PABPC1-222ENST00000523555 AKNAQ7Z591 1439 aa15.36■□□□□ 0.05
PABPC1-222ENST00000523555 KDM4FA0A1W2PPD8 638 aa15.36■□□□□ 0.05
PABPC1-222ENST00000523555 CDC42BPAQ5VT25 1732 aa15.35■□□□□ 0.05
PABPC1-222ENST00000523555 CDK11AQ9UQ88 783 aaPredicted RBP15.35■□□□□ 0.05
PABPC1-222ENST00000523555 PHLDB1Q86UU1 1377 aa15.35■□□□□ 0.05
PABPC1-222ENST00000523555 PREX2Q70Z35 1606 aa15.34■□□□□ 0.05
PABPC1-222ENST00000523555 ADGRL1O94910 1474 aa15.32■□□□□ 0.04
PABPC1-222ENST00000523555 AEBP2Q6ZN18 517 aaPredicted RBP15.31■□□□□ 0.04
PABPC1-222ENST00000523555 DENND4BO75064 1496 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms