RNA–Protein interactions for RNA: ENST00000523147.5

PTP4A3-205, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5

Gene PTP4A3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-205ENST00000523147 PRG4Q92954 1404 aaPredicted RBP35.91■■■■□ 3.34
PTP4A3-205ENST00000523147 RUSC2Q8N2Y8 1516 aa35.89■■■■□ 3.34
PTP4A3-205ENST00000523147 CARMIL1Q5VZK9 1371 aa35.87■■■■□ 3.33
PTP4A3-205ENST00000523147 KIAA0586Q9BVV6 1533 aa35.79■■■■□ 3.32
PTP4A3-205ENST00000523147 RAPGEF2Q9Y4G8 1499 aa35.59■■■■□ 3.29
PTP4A3-205ENST00000523147 IQGAP2Q13576 1575 aa35.52■■■■□ 3.28
PTP4A3-205ENST00000523147 NPM1P06748 294 aaKnown RBP eCLIP35.52■■■■□ 3.28
PTP4A3-205ENST00000523147 CARMIL2Q6F5E8 1435 aa35.49■■■■□ 3.27
PTP4A3-205ENST00000523147 TTBK1Q5TCY1 1321 aaPredicted RBP35.46■■■■□ 3.27
PTP4A3-205ENST00000523147 PTPRGP23470 1445 aa35.42■■■■□ 3.26
PTP4A3-205ENST00000523147 TNIKQ9UKE5 1360 aa35.38■■■■□ 3.26
PTP4A3-205ENST00000523147 ADCY10Q96PN6 1610 aa35.38■■■■□ 3.25
PTP4A3-205ENST00000523147 DISP1Q96F81 1524 aa35.28■■■■□ 3.24
PTP4A3-205ENST00000523147 UGGT2Q9NYU1 1516 aa35.28■■■■□ 3.24
PTP4A3-205ENST00000523147 PRXQ9BXM0 1461 aa35.28■■■■□ 3.24
PTP4A3-205ENST00000523147 CTTNBP2Q8WZ74 1663 aa35.26■■■■□ 3.23
PTP4A3-205ENST00000523147 MAPKBP1O60336 1514 aa35.26■■■■□ 3.23
PTP4A3-205ENST00000523147 KIF13AQ9H1H9 1805 aa35.22■■■■□ 3.23
PTP4A3-205ENST00000523147 FAM69CQ0P6D2 419 aa35.22■■■■□ 3.23
PTP4A3-205ENST00000523147 CSRNP3Q8WYN3 585 aa35.21■■■■□ 3.23
PTP4A3-205ENST00000523147 ABCC10Q5T3U5 1492 aa35.18■■■■□ 3.22
PTP4A3-205ENST00000523147 KIAA0556O60303 1618 aa35.17■■■■□ 3.22
PTP4A3-205ENST00000523147 UACAQ9BZF9 1416 aa35.15■■■■□ 3.22
PTP4A3-205ENST00000523147 ABCC2Q92887 1545 aa35.13■■■■□ 3.21
PTP4A3-205ENST00000523147 EEA1Q15075 1411 aa35.12■■■■□ 3.21
PTP4A3-205ENST00000523147 GOLGA3Q08378 1498 aa35.11■■■■□ 3.21
PTP4A3-205ENST00000523147 UHRF1BP1LA0JNW5 1464 aa35.1■■■■□ 3.21
PTP4A3-205ENST00000523147 DIP2BQ9P265 1576 aa35.09■■■■□ 3.21
PTP4A3-205ENST00000523147 FAM9AQ8IZU1 332 aaPredicted RBP35.06■■■■□ 3.2
PTP4A3-205ENST00000523147 ASXL2Q76L83 1435 aa34.98■■■■□ 3.19
PTP4A3-205ENST00000523147 PLB1Q6P1J6 1458 aa34.97■■■■□ 3.19
PTP4A3-205ENST00000523147 KDM5BQ9UGL1 1544 aa34.94■■■■□ 3.18
PTP4A3-205ENST00000523147 CHIC1Q5VXU3 224 aa34.93■■■■□ 3.18
PTP4A3-205ENST00000523147 P3H3Q8IVL6 736 aa34.89■■■■□ 3.18
PTP4A3-205ENST00000523147 TSPOAP1O95153 1857 aa34.88■■■■□ 3.17
PTP4A3-205ENST00000523147 ZCCHC11Q5TAX3 1644 aaKnown RBP34.88■■■■□ 3.17
PTP4A3-205ENST00000523147 RANGAP1P46060 587 aaPredicted RBP34.81■■■■□ 3.16
PTP4A3-205ENST00000523147 ABCA8O94911 1581 aa34.81■■■■□ 3.16
PTP4A3-205ENST00000523147 GLI2P10070 1586 aa34.79■■■■□ 3.16
PTP4A3-205ENST00000523147 KIF21BO75037 1637 aa34.76■■■■□ 3.15
PTP4A3-205ENST00000523147 EPRSP07814 1512 aaKnown RBP34.76■■■■□ 3.15
PTP4A3-205ENST00000523147 SAMD9Q5K651 1589 aa34.74■■■■□ 3.15
PTP4A3-205ENST00000523147 KDM6BO15054 1643 aa34.73■■■■□ 3.15
PTP4A3-205ENST00000523147 WDR7Q9Y4E6 1490 aa34.71■■■■□ 3.15
PTP4A3-205ENST00000523147 EHMT2Q96KQ7 1210 aa34.68■■■■□ 3.14
PTP4A3-205ENST00000523147 AEBP2Q6ZN18 517 aaPredicted RBP34.66■■■■□ 3.14
PTP4A3-205ENST00000523147 ARID3CA6NKF2 412 aa34.65■■■■□ 3.14
PTP4A3-205ENST00000523147 UBTFP17480 764 aaKnown RBP34.64■■■■□ 3.14
PTP4A3-205ENST00000523147 KCNH8Q96L42 1107 aa34.64■■■■□ 3.14
PTP4A3-205ENST00000523147 MAP3K4Q9Y6R4 1608 aa34.62■■■■□ 3.13
PTP4A3-205ENST00000523147 PPRC1Q5VV67 1664 aaKnown RBP34.6■■■■□ 3.13
PTP4A3-205ENST00000523147 FHOD3Q2V2M9 1422 aa34.57■■■■□ 3.13
PTP4A3-205ENST00000523147 TEX14Q8IWB6 1497 aa34.57■■■■□ 3.12
PTP4A3-205ENST00000523147 RAPGEF6Q8TEU7 1601 aa34.56■■■■□ 3.12
PTP4A3-205ENST00000523147 ATP10BO94823 1461 aa34.55■■■■□ 3.12
PTP4A3-205ENST00000523147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.55■■■■□ 3.12
PTP4A3-205ENST00000523147 HNRNPUL2Q1KMD3 747 aaKnown RBP34.55■■■■□ 3.12
PTP4A3-205ENST00000523147 EFCAB5A4FU69 1503 aa34.53■■■■□ 3.12
PTP4A3-205ENST00000523147 CD109Q6YHK3 1445 aa34.48■■■■□ 3.11
PTP4A3-205ENST00000523147 CFAP43Q8NDM7 1665 aa34.46■■■■□ 3.11
PTP4A3-205ENST00000523147 NUP153P49790 1475 aaKnown RBP34.41■■■■□ 3.1
PTP4A3-205ENST00000523147 MAGI3Q5TCQ9 1506 aa34.39■■■■□ 3.1
PTP4A3-205ENST00000523147 COL17A1Q9UMD9 1497 aaPredicted RBP34.35■■■■□ 3.09
PTP4A3-205ENST00000523147 PLEKHD1A6NEE1 506 aa34.31■■■■□ 3.08
PTP4A3-205ENST00000523147 ATP1B4Q9UN42 357 aaPredicted RBP34.27■■■■□ 3.08
PTP4A3-205ENST00000523147 ARHGAP35Q9NRY4 1499 aa34.27■■■■□ 3.08
PTP4A3-205ENST00000523147 ABCA9Q8IUA7 1624 aa34.26■■■■□ 3.08
PTP4A3-205ENST00000523147 FMN1Q68DA7 1419 aa34.26■■■■□ 3.07
PTP4A3-205ENST00000523147 KDM4FA0A1W2PPD8 638 aa34.15■■■■□ 3.06
PTP4A3-205ENST00000523147 CDK13Q14004 1512 aaKnown RBP34.14■■■■□ 3.06
PTP4A3-205ENST00000523147 PHLDB1Q86UU1 1377 aa34.13■■■■□ 3.05
PTP4A3-205ENST00000523147 HECW1Q76N89 1606 aa34.13■■■■□ 3.05
PTP4A3-205ENST00000523147 ARAP3Q8WWN8 1544 aa34.1■■■■□ 3.05
PTP4A3-205ENST00000523147 NEO1Q92859 1461 aa34.07■■■■□ 3.05
PTP4A3-205ENST00000523147 CDK11AQ9UQ88 783 aaPredicted RBP34.07■■■■□ 3.04
PTP4A3-205ENST00000523147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.03■■■■□ 3.042e-6■■■■■ 28.8
PTP4A3-205ENST00000523147 ADGRL1O94910 1474 aa34.01■■■■□ 3.03
PTP4A3-205ENST00000523147 RAPGEF3O95398 923 aa33.98■■■■□ 3.03
PTP4A3-205ENST00000523147 TTC37Q6PGP7 1564 aa33.97■■■■□ 3.03
PTP4A3-205ENST00000523147 CLIP1P30622 1438 aa33.94■■■■□ 3.02
PTP4A3-205ENST00000523147 FANCAO15360 1455 aa33.94■■■■□ 3.02
PTP4A3-205ENST00000523147 CFAP74Q9C0B2 1584 aa33.93■■■■□ 3.02
PTP4A3-205ENST00000523147 AKNAQ7Z591 1439 aa33.91■■■■□ 3.02
PTP4A3-205ENST00000523147 CASKIN1Q8WXD9 1431 aa33.9■■■■□ 3.02
PTP4A3-205ENST00000523147 PCF11O94913 1555 aaKnown RBP33.87■■■■□ 3.01
PTP4A3-205ENST00000523147 LRRIQ1Q96JM4 1722 aa33.86■■■■□ 3.01
PTP4A3-205ENST00000523147 DENND4BO75064 1496 aaPredicted RBP33.86■■■■□ 3.01
PTP4A3-205ENST00000523147 TROQ12816 1431 aaPredicted RBP33.86■■■■□ 3.01
PTP4A3-205ENST00000523147 CCDC18Q5T9S5 1454 aa33.84■■■■□ 3.01
PTP4A3-205ENST00000523147 KIF14Q15058 1648 aa33.84■■■■□ 3.01
PTP4A3-205ENST00000523147 PLCH2O75038 1416 aa33.84■■■■□ 3.01
PTP4A3-205ENST00000523147 FRMPD1Q5SYB0 1578 aa33.81■■■■□ 3
PTP4A3-205ENST00000523147 FYCO1Q9BQS8 1478 aa33.79■■■■□ 3
PTP4A3-205ENST00000523147 MYO5CQ9NQX4 1742 aa33.79■■■■□ 3
PTP4A3-205ENST00000523147 EFCAB2Q5VUJ9 269 aa33.78■■■■□ 3
PTP4A3-205ENST00000523147 RICTORQ6R327 1708 aa33.75■■■□□ 2.99
PTP4A3-205ENST00000523147 SCAPERQ9BY12 1400 aa33.71■■■□□ 2.99
PTP4A3-205ENST00000523147 ARID4BQ4LE39 1312 aaPredicted RBP33.71■■■□□ 2.99
PTP4A3-205ENST00000523147 ARHGAP5Q13017 1502 aa33.69■■■□□ 2.98
PTP4A3-205ENST00000523147 CEP162Q5TB80 1403 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms