RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 IGF1RP08069 1367 aa18.79■□□□□ 0.6
PVT1-216ENST00000523068 RUSC2Q8N2Y8 1516 aa18.79■□□□□ 0.6
PVT1-216ENST00000523068 JPH4Q96JJ6 628 aa18.74■□□□□ 0.59
PVT1-216ENST00000523068 PRG4Q92954 1404 aaPredicted RBP18.73■□□□□ 0.59
PVT1-216ENST00000523068 KIAA0586Q9BVV6 1533 aa18.7■□□□□ 0.58
PVT1-216ENST00000523068 CARMIL1Q5VZK9 1371 aa18.69■□□□□ 0.58
PVT1-216ENST00000523068 IQGAP2Q13576 1575 aa18.58■□□□□ 0.56
PVT1-216ENST00000523068 RAPGEF2Q9Y4G8 1499 aa18.58■□□□□ 0.56
PVT1-216ENST00000523068 CARMIL2Q6F5E8 1435 aa18.53■□□□□ 0.56
PVT1-216ENST00000523068 NPM1P06748 294 aaKnown RBP eCLIP18.52■□□□□ 0.56
PVT1-216ENST00000523068 ADCY10Q96PN6 1610 aa18.52■□□□□ 0.55
PVT1-216ENST00000523068 KIF13AQ9H1H9 1805 aa18.5■□□□□ 0.55
PVT1-216ENST00000523068 CTTNBP2Q8WZ74 1663 aa18.49■□□□□ 0.55
PVT1-216ENST00000523068 PTPRGP23470 1445 aa18.48■□□□□ 0.55
PVT1-216ENST00000523068 MAPKBP1O60336 1514 aa18.47■□□□□ 0.55
PVT1-216ENST00000523068 TNIKQ9UKE5 1360 aa18.46■□□□□ 0.55
PVT1-216ENST00000523068 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
PVT1-216ENST00000523068 DISP1Q96F81 1524 aa18.43■□□□□ 0.54
PVT1-216ENST00000523068 PRXQ9BXM0 1461 aa18.41■□□□□ 0.54
PVT1-216ENST00000523068 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
PVT1-216ENST00000523068 KIAA0556O60303 1618 aa18.4■□□□□ 0.54
PVT1-216ENST00000523068 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
PVT1-216ENST00000523068 DIP2BQ9P265 1576 aa18.38■□□□□ 0.53
PVT1-216ENST00000523068 UHRF1BP1LA0JNW5 1464 aa18.36■□□□□ 0.53
PVT1-216ENST00000523068 ABCC2Q92887 1545 aa18.36■□□□□ 0.53
PVT1-216ENST00000523068 FAM69CQ0P6D2 419 aa18.35■□□□□ 0.53
PVT1-216ENST00000523068 GOLGA3Q08378 1498 aa18.34■□□□□ 0.53
PVT1-216ENST00000523068 UACAQ9BZF9 1416 aa18.34■□□□□ 0.53
PVT1-216ENST00000523068 EEA1Q15075 1411 aa18.33■□□□□ 0.53
PVT1-216ENST00000523068 CSRNP3Q8WYN3 585 aa18.31■□□□□ 0.52
PVT1-216ENST00000523068 PLB1Q6P1J6 1458 aa18.28■□□□□ 0.52
PVT1-216ENST00000523068 TSPOAP1O95153 1857 aa18.28■□□□□ 0.52
PVT1-216ENST00000523068 KDM5BQ9UGL1 1544 aa18.27■□□□□ 0.51
PVT1-216ENST00000523068 ASXL2Q76L83 1435 aa18.26■□□□□ 0.51
PVT1-216ENST00000523068 ZCCHC11Q5TAX3 1644 aaKnown RBP18.26■□□□□ 0.51
PVT1-216ENST00000523068 GLI2P10070 1586 aa18.22■□□□□ 0.51
PVT1-216ENST00000523068 FAM9AQ8IZU1 332 aaPredicted RBP18.22■□□□□ 0.51
PVT1-216ENST00000523068 ABCA8O94911 1581 aa18.2■□□□□ 0.5
PVT1-216ENST00000523068 KDM6BO15054 1643 aa18.19■□□□□ 0.5
PVT1-216ENST00000523068 SAMD9Q5K651 1589 aa18.17■□□□□ 0.5
PVT1-216ENST00000523068 KIF21BO75037 1637 aa18.17■□□□□ 0.5
PVT1-216ENST00000523068 EPRSP07814 1512 aaKnown RBP18.16■□□□□ 0.5
PVT1-216ENST00000523068 MAP3K4Q9Y6R4 1608 aa18.15■□□□□ 0.5
PVT1-216ENST00000523068 PPRC1Q5VV67 1664 aaKnown RBP18.15■□□□□ 0.5
PVT1-216ENST00000523068 WDR7Q9Y4E6 1490 aa18.14■□□□□ 0.49
PVT1-216ENST00000523068 P3H3Q8IVL6 736 aa18.11■□□□□ 0.49
PVT1-216ENST00000523068 TEX14Q8IWB6 1497 aa18.08■□□□□ 0.49
PVT1-216ENST00000523068 CFAP43Q8NDM7 1665 aa18.08■□□□□ 0.48
PVT1-216ENST00000523068 RAPGEF6Q8TEU7 1601 aa18.08■□□□□ 0.48
PVT1-216ENST00000523068 EFCAB5A4FU69 1503 aa18.05■□□□□ 0.48
PVT1-216ENST00000523068 ATP10BO94823 1461 aa18.03■□□□□ 0.48
PVT1-216ENST00000523068 RANGAP1P46060 587 aaPredicted RBP18.03■□□□□ 0.48
PVT1-216ENST00000523068 FHOD3Q2V2M9 1422 aa18.01■□□□□ 0.47
PVT1-216ENST00000523068 KCNH8Q96L42 1107 aa18.01■□□□□ 0.47
PVT1-216ENST00000523068 CD109Q6YHK3 1445 aa17.99■□□□□ 0.47
PVT1-216ENST00000523068 UBTFP17480 764 aaKnown RBP17.99■□□□□ 0.47
PVT1-216ENST00000523068 MAGI3Q5TCQ9 1506 aa17.98■□□□□ 0.47
PVT1-216ENST00000523068 ARID3CA6NKF2 412 aa17.98■□□□□ 0.47
PVT1-216ENST00000523068 NUP153P49790 1475 aaKnown RBP17.96■□□□□ 0.47
PVT1-216ENST00000523068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
PVT1-216ENST00000523068 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
PVT1-216ENST00000523068 ABCA9Q8IUA7 1624 aa17.94■□□□□ 0.46
PVT1-216ENST00000523068 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
PVT1-216ENST00000523068 COL17A1Q9UMD9 1497 aaPredicted RBP17.93■□□□□ 0.46
PVT1-216ENST00000523068 FMN1Q68DA7 1419 aa17.89■□□□□ 0.45
PVT1-216ENST00000523068 PLEKHD1A6NEE1 506 aa17.87■□□□□ 0.45
PVT1-216ENST00000523068 ARHGAP35Q9NRY4 1499 aa17.86■□□□□ 0.45
PVT1-216ENST00000523068 HECW1Q76N89 1606 aa17.85■□□□□ 0.45
PVT1-216ENST00000523068 PHLDB1Q86UU1 1377 aa17.85■□□□□ 0.45
PVT1-216ENST00000523068 ARAP3Q8WWN8 1544 aa17.84■□□□□ 0.45
PVT1-216ENST00000523068 NEO1Q92859 1461 aa17.82■□□□□ 0.44
PVT1-216ENST00000523068 KDM4FA0A1W2PPD8 638 aa17.82■□□□□ 0.44
PVT1-216ENST00000523068 CDK13Q14004 1512 aaKnown RBP17.81■□□□□ 0.44
PVT1-216ENST00000523068 CFAP74Q9C0B2 1584 aa17.79■□□□□ 0.44
PVT1-216ENST00000523068 ADGRL1O94910 1474 aa17.78■□□□□ 0.44
PVT1-216ENST00000523068 ATP1B4Q9UN42 357 aaPredicted RBP17.78■□□□□ 0.44
PVT1-216ENST00000523068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.77■□□□□ 0.44
PVT1-216ENST00000523068 CDK11AQ9UQ88 783 aaPredicted RBP17.76■□□□□ 0.43
PVT1-216ENST00000523068 TTC37Q6PGP7 1564 aa17.75■□□□□ 0.43
PVT1-216ENST00000523068 LRRIQ1Q96JM4 1722 aa17.73■□□□□ 0.43
PVT1-216ENST00000523068 FANCAO15360 1455 aa17.72■□□□□ 0.43
PVT1-216ENST00000523068 MYO5CQ9NQX4 1742 aa17.71■□□□□ 0.43
PVT1-216ENST00000523068 KIF14Q15058 1648 aa17.7■□□□□ 0.42
PVT1-216ENST00000523068 AKNAQ7Z591 1439 aa17.7■□□□□ 0.42
PVT1-216ENST00000523068 FRMPD1Q5SYB0 1578 aa17.7■□□□□ 0.42
PVT1-216ENST00000523068 RICTORQ6R327 1708 aa17.69■□□□□ 0.42
PVT1-216ENST00000523068 RAPGEF3O95398 923 aa17.69■□□□□ 0.42
PVT1-216ENST00000523068 CCDC18Q5T9S5 1454 aa17.69■□□□□ 0.42
PVT1-216ENST00000523068 PCF11O94913 1555 aaKnown RBP17.68■□□□□ 0.42
PVT1-216ENST00000523068 CLIP1P30622 1438 aa17.68■□□□□ 0.42
PVT1-216ENST00000523068 CASKIN1Q8WXD9 1431 aa17.68■□□□□ 0.42
PVT1-216ENST00000523068 DENND4BO75064 1496 aaPredicted RBP17.68■□□□□ 0.42
PVT1-216ENST00000523068 PLCH2O75038 1416 aa17.66■□□□□ 0.42
PVT1-216ENST00000523068 TROQ12816 1431 aaPredicted RBP17.66■□□□□ 0.42
PVT1-216ENST00000523068 FYCO1Q9BQS8 1478 aa17.64■□□□□ 0.41
PVT1-216ENST00000523068 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
PVT1-216ENST00000523068 ZMYM4Q5VZL5 1548 aa17.61■□□□□ 0.41
PVT1-216ENST00000523068 EFCAB2Q5VUJ9 269 aa17.6■□□□□ 0.41
PVT1-216ENST00000523068 MAGI2Q86UL8 1455 aa17.58■□□□□ 0.41
PVT1-216ENST00000523068 SCAPERQ9BY12 1400 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms