RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 NUP160Q12769 1436 aa17.86■□□□□ 0.45
DENND3-220ENST00000523066 CARMIL1Q5VZK9 1371 aa17.81■□□□□ 0.44
DENND3-220ENST00000523066 ARAP1Q96P48 1450 aa17.79■□□□□ 0.44
DENND3-220ENST00000523066 ERCC6L2Q5T890 1561 aa17.79■□□□□ 0.44
DENND3-220ENST00000523066 CYB5RLQ6IPT4 315 aa17.76■□□□□ 0.43
DENND3-220ENST00000523066 SHROOM2Q13796 1616 aa17.76■□□□□ 0.43
DENND3-220ENST00000523066 ADRA2BP18089 450 aa17.71■□□□□ 0.43
DENND3-220ENST00000523066 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
DENND3-220ENST00000523066 JPH4Q96JJ6 628 aa17.69■□□□□ 0.42
DENND3-220ENST00000523066 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
DENND3-220ENST00000523066 KIAA0586Q9BVV6 1533 aa17.67■□□□□ 0.42
DENND3-220ENST00000523066 PRG4Q92954 1404 aaPredicted RBP17.66■□□□□ 0.42
DENND3-220ENST00000523066 FAM9AQ8IZU1 332 aaPredicted RBP17.66■□□□□ 0.42
DENND3-220ENST00000523066 PRXQ9BXM0 1461 aa17.64■□□□□ 0.41
DENND3-220ENST00000523066 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
DENND3-220ENST00000523066 IQGAP2Q13576 1575 aa17.61■□□□□ 0.41
DENND3-220ENST00000523066 CTTNBP2Q8WZ74 1663 aa17.6■□□□□ 0.41
DENND3-220ENST00000523066 EEA1Q15075 1411 aa17.57■□□□□ 0.4
DENND3-220ENST00000523066 TTBK1Q5TCY1 1321 aaPredicted RBP17.51■□□□□ 0.39
DENND3-220ENST00000523066 DISP1Q96F81 1524 aa17.51■□□□□ 0.39
DENND3-220ENST00000523066 EHMT2Q96KQ7 1210 aa17.5■□□□□ 0.39
DENND3-220ENST00000523066 UGGT2Q9NYU1 1516 aa17.5■□□□□ 0.39
DENND3-220ENST00000523066 KIF21BO75037 1637 aa17.47■□□□□ 0.39
DENND3-220ENST00000523066 KIAA0556O60303 1618 aa17.46■□□□□ 0.39
DENND3-220ENST00000523066 CARMIL2Q6F5E8 1435 aa17.46■□□□□ 0.39
DENND3-220ENST00000523066 ADCY10Q96PN6 1610 aa17.43■□□□□ 0.38
DENND3-220ENST00000523066 TNIKQ9UKE5 1360 aa17.43■□□□□ 0.38
DENND3-220ENST00000523066 PTPRGP23470 1445 aa17.43■□□□□ 0.38
DENND3-220ENST00000523066 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
DENND3-220ENST00000523066 RANGAP1P46060 587 aaPredicted RBP17.39■□□□□ 0.37
DENND3-220ENST00000523066 P3H3Q8IVL6 736 aa17.37■□□□□ 0.37
DENND3-220ENST00000523066 GOLGA3Q08378 1498 aa17.35■□□□□ 0.37
DENND3-220ENST00000523066 SAMD9Q5K651 1589 aa17.33■□□□□ 0.37
DENND3-220ENST00000523066 UBTFP17480 764 aaKnown RBP17.33■□□□□ 0.36
DENND3-220ENST00000523066 UACAQ9BZF9 1416 aa17.31■□□□□ 0.36
DENND3-220ENST00000523066 PLB1Q6P1J6 1458 aa17.31■□□□□ 0.36
DENND3-220ENST00000523066 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
DENND3-220ENST00000523066 ABCC2Q92887 1545 aa17.29■□□□□ 0.36
DENND3-220ENST00000523066 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
DENND3-220ENST00000523066 UHRF1BP1LA0JNW5 1464 aa17.28■□□□□ 0.36
DENND3-220ENST00000523066 ABCA8O94911 1581 aa17.27■□□□□ 0.35
DENND3-220ENST00000523066 FHOD3Q2V2M9 1422 aa17.26■□□□□ 0.35
DENND3-220ENST00000523066 MAPKBP1O60336 1514 aa17.26■□□□□ 0.35
DENND3-220ENST00000523066 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
DENND3-220ENST00000523066 KDM5BQ9UGL1 1544 aa17.21■□□□□ 0.35
DENND3-220ENST00000523066 DIP2BQ9P265 1576 aa17.2■□□□□ 0.34
DENND3-220ENST00000523066 ARID3CA6NKF2 412 aa17.2■□□□□ 0.34
DENND3-220ENST00000523066 EFCAB5A4FU69 1503 aa17.2■□□□□ 0.34
DENND3-220ENST00000523066 ABCC10Q5T3U5 1492 aa17.19■□□□□ 0.34
DENND3-220ENST00000523066 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
DENND3-220ENST00000523066 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
DENND3-220ENST00000523066 FAM69CQ0P6D2 419 aa17.18■□□□□ 0.34
DENND3-220ENST00000523066 RAPGEF6Q8TEU7 1601 aa17.18■□□□□ 0.34
DENND3-220ENST00000523066 TSPOAP1O95153 1857 aa17.16■□□□□ 0.34
DENND3-220ENST00000523066 PIAS4Q8N2W9 510 aaPredicted RBP17.13■□□□□ 0.33
DENND3-220ENST00000523066 ATP10BO94823 1461 aa17.12■□□□□ 0.33
DENND3-220ENST00000523066 NUP153P49790 1475 aaKnown RBP17.11■□□□□ 0.33
DENND3-220ENST00000523066 LOC105371045A0A1W2PR82 267 aa17.1■□□□□ 0.33
DENND3-220ENST00000523066 EPRSP07814 1512 aaKnown RBP17.09■□□□□ 0.33
DENND3-220ENST00000523066 WDR7Q9Y4E6 1490 aa17.08■□□□□ 0.32
DENND3-220ENST00000523066 PPRC1Q5VV67 1664 aaKnown RBP17.06■□□□□ 0.32
DENND3-220ENST00000523066 GLI2P10070 1586 aa17.06■□□□□ 0.32
DENND3-220ENST00000523066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
DENND3-220ENST00000523066 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
DENND3-220ENST00000523066 KCNH8Q96L42 1107 aa17.05■□□□□ 0.32
DENND3-220ENST00000523066 CLIP1P30622 1438 aa17.04■□□□□ 0.32
DENND3-220ENST00000523066 LRRIQ1Q96JM4 1722 aa17.04■□□□□ 0.32
DENND3-220ENST00000523066 CDK13Q14004 1512 aaKnown RBP17.03■□□□□ 0.32
DENND3-220ENST00000523066 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
DENND3-220ENST00000523066 FMN1Q68DA7 1419 aa17.03■□□□□ 0.32
DENND3-220ENST00000523066 MAP3K4Q9Y6R4 1608 aa17.03■□□□□ 0.32
DENND3-220ENST00000523066 HECW1Q76N89 1606 aa17■□□□□ 0.31
DENND3-220ENST00000523066 PCF11O94913 1555 aaKnown RBP17■□□□□ 0.31
DENND3-220ENST00000523066 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
DENND3-220ENST00000523066 CFAP43Q8NDM7 1665 aa16.97■□□□□ 0.31
DENND3-220ENST00000523066 PLEKHD1A6NEE1 506 aa16.93■□□□□ 0.3
DENND3-220ENST00000523066 CD109Q6YHK3 1445 aa16.93■□□□□ 0.3
DENND3-220ENST00000523066 KDM6BO15054 1643 aa16.92■□□□□ 0.3
DENND3-220ENST00000523066 ABCA9Q8IUA7 1624 aa16.92■□□□□ 0.3
DENND3-220ENST00000523066 CASKIN1Q8WXD9 1431 aa16.92■□□□□ 0.3
DENND3-220ENST00000523066 FYCO1Q9BQS8 1478 aa16.88■□□□□ 0.29
DENND3-220ENST00000523066 COL17A1Q9UMD9 1497 aaPredicted RBP16.88■□□□□ 0.29
DENND3-220ENST00000523066 MAGI3Q5TCQ9 1506 aa16.88■□□□□ 0.29
DENND3-220ENST00000523066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.88■□□□□ 0.29
DENND3-220ENST00000523066 TTC37Q6PGP7 1564 aa16.87■□□□□ 0.29
DENND3-220ENST00000523066 TEX14Q8IWB6 1497 aa16.86■□□□□ 0.29
DENND3-220ENST00000523066 KIF14Q15058 1648 aa16.86■□□□□ 0.29
DENND3-220ENST00000523066 CCDC18Q5T9S5 1454 aa16.83■□□□□ 0.28
DENND3-220ENST00000523066 TROQ12816 1431 aaPredicted RBP16.82■□□□□ 0.28
DENND3-220ENST00000523066 CDK11AQ9UQ88 783 aaPredicted RBP16.8■□□□□ 0.28
DENND3-220ENST00000523066 MYO5CQ9NQX4 1742 aa16.77■□□□□ 0.28
DENND3-220ENST00000523066 VPS8Q8N3P4 1428 aa16.76■□□□□ 0.27
DENND3-220ENST00000523066 KCNA4P22459 653 aa16.74■□□□□ 0.27
DENND3-220ENST00000523066 FANCAO15360 1455 aa16.73■□□□□ 0.27
DENND3-220ENST00000523066 NEO1Q92859 1461 aa16.73■□□□□ 0.27
DENND3-220ENST00000523066 CDC42BPBQ9Y5S2 1711 aa16.73■□□□□ 0.27
DENND3-220ENST00000523066 PLCH2O75038 1416 aa16.73■□□□□ 0.27
DENND3-220ENST00000523066 ARAP3Q8WWN8 1544 aa16.73■□□□□ 0.27
DENND3-220ENST00000523066 AKNAQ7Z591 1439 aa16.71■□□□□ 0.27
DENND3-220ENST00000523066 CDC42BPAQ5VT25 1732 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms