RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 CARMIL1Q5VZK9 1371 aa32.12■■■□□ 2.73
SPIDR-220ENST00000522900 CUL7Q14999 1698 aa32.1■■■□□ 2.73
SPIDR-220ENST00000522900 RUSC2Q8N2Y8 1516 aa32.1■■■□□ 2.73
SPIDR-220ENST00000522900 KIAA0586Q9BVV6 1533 aa32.04■■■□□ 2.72
SPIDR-220ENST00000522900 RAPGEF2Q9Y4G8 1499 aa31.84■■■□□ 2.69
SPIDR-220ENST00000522900 IQGAP2Q13576 1575 aa31.74■■■□□ 2.67
SPIDR-220ENST00000522900 TTBK1Q5TCY1 1321 aaPredicted RBP31.74■■■□□ 2.67
SPIDR-220ENST00000522900 PTPRGP23470 1445 aa31.71■■■□□ 2.67
SPIDR-220ENST00000522900 NPM1P06748 294 aaKnown RBP eCLIP31.69■■■□□ 2.66
SPIDR-220ENST00000522900 CARMIL2Q6F5E8 1435 aa31.68■■■□□ 2.66
SPIDR-220ENST00000522900 ADCY10Q96PN6 1610 aa31.67■■■□□ 2.66
SPIDR-220ENST00000522900 TNIKQ9UKE5 1360 aa31.66■■■□□ 2.66
SPIDR-220ENST00000522900 DISP1Q96F81 1524 aa31.63■■■□□ 2.65
SPIDR-220ENST00000522900 PRXQ9BXM0 1461 aa31.62■■■□□ 2.65
SPIDR-220ENST00000522900 UGGT2Q9NYU1 1516 aa31.58■■■□□ 2.65
SPIDR-220ENST00000522900 CSRNP3Q8WYN3 585 aa31.54■■■□□ 2.64
SPIDR-220ENST00000522900 FAM69CQ0P6D2 419 aa31.53■■■□□ 2.64
SPIDR-220ENST00000522900 MAPKBP1O60336 1514 aa31.53■■■□□ 2.64
SPIDR-220ENST00000522900 ABCC10Q5T3U5 1492 aa31.5■■■□□ 2.63
SPIDR-220ENST00000522900 KIF13AQ9H1H9 1805 aa31.49■■■□□ 2.63
SPIDR-220ENST00000522900 UACAQ9BZF9 1416 aa31.46■■■□□ 2.63
SPIDR-220ENST00000522900 KIAA0556O60303 1618 aa31.45■■■□□ 2.62
SPIDR-220ENST00000522900 ABCC2Q92887 1545 aa31.44■■■□□ 2.62
SPIDR-220ENST00000522900 CTTNBP2Q8WZ74 1663 aa31.43■■■□□ 2.62
SPIDR-220ENST00000522900 UHRF1BP1LA0JNW5 1464 aa31.42■■■□□ 2.62
SPIDR-220ENST00000522900 FAM9AQ8IZU1 332 aaPredicted RBP31.41■■■□□ 2.62
SPIDR-220ENST00000522900 DIP2BQ9P265 1576 aa31.39■■■□□ 2.61
SPIDR-220ENST00000522900 EEA1Q15075 1411 aa31.35■■■□□ 2.61
SPIDR-220ENST00000522900 CHIC1Q5VXU3 224 aa31.35■■■□□ 2.61
SPIDR-220ENST00000522900 GOLGA3Q08378 1498 aa31.33■■■□□ 2.61
SPIDR-220ENST00000522900 ASXL2Q76L83 1435 aa31.32■■■□□ 2.61
SPIDR-220ENST00000522900 P3H3Q8IVL6 736 aa31.29■■■□□ 2.6
SPIDR-220ENST00000522900 KDM5BQ9UGL1 1544 aa31.29■■■□□ 2.6
SPIDR-220ENST00000522900 PLB1Q6P1J6 1458 aa31.28■■■□□ 2.6
SPIDR-220ENST00000522900 ZCCHC11Q5TAX3 1644 aaKnown RBP31.18■■■□□ 2.58
SPIDR-220ENST00000522900 RANGAP1P46060 587 aaPredicted RBP31.17■■■□□ 2.58
SPIDR-220ENST00000522900 ABCA8O94911 1581 aa31.17■■■□□ 2.58
SPIDR-220ENST00000522900 TSPOAP1O95153 1857 aa31.13■■■□□ 2.57
SPIDR-220ENST00000522900 EPRSP07814 1512 aaKnown RBP31.12■■■□□ 2.57
SPIDR-220ENST00000522900 GLI2P10070 1586 aa31.12■■■□□ 2.57
SPIDR-220ENST00000522900 EHMT2Q96KQ7 1210 aa31.09■■■□□ 2.57
SPIDR-220ENST00000522900 SAMD9Q5K651 1589 aa31.08■■■□□ 2.57
SPIDR-220ENST00000522900 ARID3CA6NKF2 412 aa31.07■■■□□ 2.56
SPIDR-220ENST00000522900 KIF21BO75037 1637 aa31.06■■■□□ 2.56
SPIDR-220ENST00000522900 WDR7Q9Y4E6 1490 aa31.04■■■□□ 2.56
SPIDR-220ENST00000522900 KCNH8Q96L42 1107 aa31.02■■■□□ 2.56
SPIDR-220ENST00000522900 KDM6BO15054 1643 aa31■■■□□ 2.55
SPIDR-220ENST00000522900 PPRC1Q5VV67 1664 aaKnown RBP31■■■□□ 2.55
SPIDR-220ENST00000522900 FHOD3Q2V2M9 1422 aa30.98■■■□□ 2.55
SPIDR-220ENST00000522900 ATP10BO94823 1461 aa30.97■■■□□ 2.55
SPIDR-220ENST00000522900 MAP3K4Q9Y6R4 1608 aa30.95■■■□□ 2.55
SPIDR-220ENST00000522900 UBTFP17480 764 aaKnown RBP30.95■■■□□ 2.55
SPIDR-220ENST00000522900 AEBP2Q6ZN18 517 aaPredicted RBP30.92■■■□□ 2.54
SPIDR-220ENST00000522900 COL17A1Q9UMD9 1497 aaPredicted RBP30.88■■■□□ 2.53
SPIDR-220ENST00000522900 RAPGEF6Q8TEU7 1601 aa30.87■■■□□ 2.53
SPIDR-220ENST00000522900 CD109Q6YHK3 1445 aa30.85■■■□□ 2.53
SPIDR-220ENST00000522900 TEX14Q8IWB6 1497 aa30.84■■■□□ 2.53
SPIDR-220ENST00000522900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.84■■■□□ 2.53
SPIDR-220ENST00000522900 HNRNPUL2Q1KMD3 747 aaKnown RBP30.84■■■□□ 2.53
SPIDR-220ENST00000522900 NUP153P49790 1475 aaKnown RBP30.83■■■□□ 2.53
SPIDR-220ENST00000522900 EFCAB5A4FU69 1503 aa30.82■■■□□ 2.52
SPIDR-220ENST00000522900 MAGI3Q5TCQ9 1506 aa30.77■■■□□ 2.52
SPIDR-220ENST00000522900 CFAP43Q8NDM7 1665 aa30.74■■■□□ 2.51
SPIDR-220ENST00000522900 ARHGAP35Q9NRY4 1499 aa30.7■■■□□ 2.51
SPIDR-220ENST00000522900 KDM4FA0A1W2PPD8 638 aa30.68■■■□□ 2.5
SPIDR-220ENST00000522900 PLEKHD1A6NEE1 506 aa30.67■■■□□ 2.5
SPIDR-220ENST00000522900 ABCA9Q8IUA7 1624 aa30.62■■■□□ 2.49
SPIDR-220ENST00000522900 ATP1B4Q9UN42 357 aaPredicted RBP30.62■■■□□ 2.49
SPIDR-220ENST00000522900 FMN1Q68DA7 1419 aa30.59■■■□□ 2.49
SPIDR-220ENST00000522900 CDK13Q14004 1512 aaKnown RBP30.57■■■□□ 2.49
SPIDR-220ENST00000522900 ARAP3Q8WWN8 1544 aa30.52■■■□□ 2.48
SPIDR-220ENST00000522900 PHLDB1Q86UU1 1377 aa30.48■■■□□ 2.47
SPIDR-220ENST00000522900 RAPGEF3O95398 923 aa30.47■■■□□ 2.47
SPIDR-220ENST00000522900 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.46■■■□□ 2.47
SPIDR-220ENST00000522900 NEO1Q92859 1461 aa30.45■■■□□ 2.47
SPIDR-220ENST00000522900 HECW1Q76N89 1606 aa30.44■■■□□ 2.46
SPIDR-220ENST00000522900 ADGRL1O94910 1474 aa30.44■■■□□ 2.46
SPIDR-220ENST00000522900 TTC37Q6PGP7 1564 aa30.39■■■□□ 2.46
SPIDR-220ENST00000522900 CDK11AQ9UQ88 783 aaPredicted RBP30.38■■■□□ 2.45
SPIDR-220ENST00000522900 CLIP1P30622 1438 aa30.36■■■□□ 2.45
SPIDR-220ENST00000522900 AKNAQ7Z591 1439 aa30.35■■■□□ 2.45
SPIDR-220ENST00000522900 FANCAO15360 1455 aa30.34■■■□□ 2.45
SPIDR-220ENST00000522900 CASKIN1Q8WXD9 1431 aa30.33■■■□□ 2.45
SPIDR-220ENST00000522900 LRRIQ1Q96JM4 1722 aa30.3■■■□□ 2.44
SPIDR-220ENST00000522900 PLCH2O75038 1416 aa30.3■■■□□ 2.44
SPIDR-220ENST00000522900 TROQ12816 1431 aaPredicted RBP30.3■■■□□ 2.44
SPIDR-220ENST00000522900 FRMPD1Q5SYB0 1578 aa30.29■■■□□ 2.44
SPIDR-220ENST00000522900 PCF11O94913 1555 aaKnown RBP30.28■■■□□ 2.44
SPIDR-220ENST00000522900 DENND4BO75064 1496 aaPredicted RBP30.28■■■□□ 2.44
SPIDR-220ENST00000522900 KIF14Q15058 1648 aa30.25■■■□□ 2.43
SPIDR-220ENST00000522900 CFAP74Q9C0B2 1584 aa30.2■■■□□ 2.43
SPIDR-220ENST00000522900 EFCAB2Q5VUJ9 269 aa30.2■■■□□ 2.43
SPIDR-220ENST00000522900 CCDC18Q5T9S5 1454 aa30.19■■■□□ 2.42
SPIDR-220ENST00000522900 FYCO1Q9BQS8 1478 aa30.19■■■□□ 2.42
SPIDR-220ENST00000522900 SCAPERQ9BY12 1400 aa30.18■■■□□ 2.42
SPIDR-220ENST00000522900 RICTORQ6R327 1708 aa30.16■■■□□ 2.42
SPIDR-220ENST00000522900 LOC105371045A0A1W2PR82 267 aa30.14■■■□□ 2.42
SPIDR-220ENST00000522900 MYO5CQ9NQX4 1742 aa30.11■■■□□ 2.41
SPIDR-220ENST00000522900 ARID4BQ4LE39 1312 aaPredicted RBP30.11■■■□□ 2.41
SPIDR-220ENST00000522900 CEP162Q5TB80 1403 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms