RNA–Protein interactions for RNA: ENST00000522698.1

EXTL3-211, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-211ENST00000522698 CSRNP3Q8WYN3 585 aa23.25■■□□□ 1.31
EXTL3-211ENST00000522698 NUP160Q12769 1436 aa23.25■■□□□ 1.31
EXTL3-211ENST00000522698 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
EXTL3-211ENST00000522698 PRXQ9BXM0 1461 aa23.22■■□□□ 1.31
EXTL3-211ENST00000522698 FHAD1B1AJZ9 1412 aa23.21■■□□□ 1.31
EXTL3-211ENST00000522698 KIF21BO75037 1637 aa23.2■■□□□ 1.3
EXTL3-211ENST00000522698 CARMIL1Q5VZK9 1371 aa23.19■■□□□ 1.3
EXTL3-211ENST00000522698 SHROOM2Q13796 1616 aa23.14■■□□□ 1.29
EXTL3-211ENST00000522698 RAPGEF2Q9Y4G8 1499 aa23.13■■□□□ 1.29
EXTL3-211ENST00000522698 GOLGA3Q08378 1498 aa23.05■■□□□ 1.28
EXTL3-211ENST00000522698 PRG4Q92954 1404 aaPredicted RBP23.03■■□□□ 1.28
EXTL3-211ENST00000522698 KIF13AQ9H1H9 1805 aa23.01■■□□□ 1.27
EXTL3-211ENST00000522698 CTTNBP2Q8WZ74 1663 aa23■■□□□ 1.27
EXTL3-211ENST00000522698 JPH4Q96JJ6 628 aa22.95■■□□□ 1.26
EXTL3-211ENST00000522698 KIAA0586Q9BVV6 1533 aa22.87■■□□□ 1.25
EXTL3-211ENST00000522698 IQGAP2Q13576 1575 aa22.86■■□□□ 1.25
EXTL3-211ENST00000522698 LOC105371045A0A1W2PR82 267 aa22.86■■□□□ 1.25
EXTL3-211ENST00000522698 EHMT2Q96KQ7 1210 aa22.86■■□□□ 1.25
EXTL3-211ENST00000522698 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
EXTL3-211ENST00000522698 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.25
EXTL3-211ENST00000522698 ABCC10Q5T3U5 1492 aa22.82■■□□□ 1.24
EXTL3-211ENST00000522698 MAPKBP1O60336 1514 aa22.82■■□□□ 1.24
EXTL3-211ENST00000522698 ADCY10Q96PN6 1610 aa22.81■■□□□ 1.24
EXTL3-211ENST00000522698 NPM1P06748 294 aaKnown RBP eCLIP22.79■■□□□ 1.24
EXTL3-211ENST00000522698 DIP2BQ9P265 1576 aa22.77■■□□□ 1.24
EXTL3-211ENST00000522698 FAM69CQ0P6D2 419 aa22.77■■□□□ 1.24
EXTL3-211ENST00000522698 UGGT2Q9NYU1 1516 aa22.77■■□□□ 1.24
EXTL3-211ENST00000522698 SAMD9Q5K651 1589 aa22.71■■□□□ 1.23
EXTL3-211ENST00000522698 KDM6BO15054 1643 aa22.68■■□□□ 1.22
EXTL3-211ENST00000522698 EFCAB5A4FU69 1503 aa22.67■■□□□ 1.22
EXTL3-211ENST00000522698 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
EXTL3-211ENST00000522698 DISP1Q96F81 1524 aa22.66■■□□□ 1.22
EXTL3-211ENST00000522698 KIAA0556O60303 1618 aa22.65■■□□□ 1.22
EXTL3-211ENST00000522698 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
EXTL3-211ENST00000522698 TSPOAP1O95153 1857 aa22.64■■□□□ 1.22
EXTL3-211ENST00000522698 PTPRGP23470 1445 aa22.63■■□□□ 1.21
EXTL3-211ENST00000522698 ARHGAP35Q9NRY4 1499 aa22.62■■□□□ 1.21
EXTL3-211ENST00000522698 CLIP1P30622 1438 aa22.62■■□□□ 1.21
EXTL3-211ENST00000522698 CARMIL2Q6F5E8 1435 aa22.57■■□□□ 1.2
EXTL3-211ENST00000522698 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
EXTL3-211ENST00000522698 ABCC2Q92887 1545 aa22.55■■□□□ 1.2
EXTL3-211ENST00000522698 KDM4FA0A1W2PPD8 638 aa22.52■■□□□ 1.2
EXTL3-211ENST00000522698 FHOD3Q2V2M9 1422 aa22.5■■□□□ 1.19
EXTL3-211ENST00000522698 ASXL2Q76L83 1435 aa22.49■■□□□ 1.19
EXTL3-211ENST00000522698 P3H3Q8IVL6 736 aa22.46■■□□□ 1.19
EXTL3-211ENST00000522698 UACAQ9BZF9 1416 aa22.46■■□□□ 1.19
EXTL3-211ENST00000522698 UHRF1BP1LA0JNW5 1464 aa22.46■■□□□ 1.19
EXTL3-211ENST00000522698 GLI2P10070 1586 aa22.46■■□□□ 1.19
EXTL3-211ENST00000522698 PLB1Q6P1J6 1458 aa22.45■■□□□ 1.18
EXTL3-211ENST00000522698 PPRC1Q5VV67 1664 aaKnown RBP22.43■■□□□ 1.18
EXTL3-211ENST00000522698 FMN1Q68DA7 1419 aa22.4■■□□□ 1.18
EXTL3-211ENST00000522698 ABCA8O94911 1581 aa22.38■■□□□ 1.17
EXTL3-211ENST00000522698 KDM5BQ9UGL1 1544 aa22.37■■□□□ 1.17
EXTL3-211ENST00000522698 EPRSP07814 1512 aaKnown RBP22.36■■□□□ 1.17
EXTL3-211ENST00000522698 VPS8Q8N3P4 1428 aa22.36■■□□□ 1.17
EXTL3-211ENST00000522698 PCF11O94913 1555 aaKnown RBP22.36■■□□□ 1.17
EXTL3-211ENST00000522698 ZCCHC11Q5TAX3 1644 aaKnown RBP22.35■■□□□ 1.17
EXTL3-211ENST00000522698 RAPGEF6Q8TEU7 1601 aa22.35■■□□□ 1.17
EXTL3-211ENST00000522698 MAP3K4Q9Y6R4 1608 aa22.32■■□□□ 1.16
EXTL3-211ENST00000522698 ADGRL1O94910 1474 aa22.31■■□□□ 1.16
EXTL3-211ENST00000522698 TEX14Q8IWB6 1497 aa22.3■■□□□ 1.16
EXTL3-211ENST00000522698 CASKIN1Q8WXD9 1431 aa22.3■■□□□ 1.16
EXTL3-211ENST00000522698 FYCO1Q9BQS8 1478 aa22.29■■□□□ 1.16
EXTL3-211ENST00000522698 COL17A1Q9UMD9 1497 aaPredicted RBP22.29■■□□□ 1.16
EXTL3-211ENST00000522698 LRRIQ1Q96JM4 1722 aa22.29■■□□□ 1.16
EXTL3-211ENST00000522698 HECW1Q76N89 1606 aa22.28■■□□□ 1.16
EXTL3-211ENST00000522698 NUP153P49790 1475 aaKnown RBP22.25■■□□□ 1.15
EXTL3-211ENST00000522698 WDR7Q9Y4E6 1490 aa22.25■■□□□ 1.15
EXTL3-211ENST00000522698 ILDR1Q86SU0 546 aaPredicted RBP22.21■■□□□ 1.15
EXTL3-211ENST00000522698 CFAP43Q8NDM7 1665 aa22.18■■□□□ 1.14
EXTL3-211ENST00000522698 CCDC18Q5T9S5 1454 aa22.16■■□□□ 1.14
EXTL3-211ENST00000522698 ATP10BO94823 1461 aa22.15■■□□□ 1.14
EXTL3-211ENST00000522698 HECW2Q9P2P5 1572 aa22.14■■□□□ 1.13
EXTL3-211ENST00000522698 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
EXTL3-211ENST00000522698 CDK13Q14004 1512 aaKnown RBP22.14■■□□□ 1.13
EXTL3-211ENST00000522698 TIAM1Q13009 1591 aa22.12■■□□□ 1.13
EXTL3-211ENST00000522698 KCNH8Q96L42 1107 aa22.11■■□□□ 1.13
EXTL3-211ENST00000522698 CD109Q6YHK3 1445 aa22.11■■□□□ 1.13
EXTL3-211ENST00000522698 MAGI3Q5TCQ9 1506 aa22.1■■□□□ 1.13
EXTL3-211ENST00000522698 ATP1B4Q9UN42 357 aaPredicted RBP22.09■■□□□ 1.13
EXTL3-211ENST00000522698 ARID3CA6NKF2 412 aa22.08■■□□□ 1.13
EXTL3-211ENST00000522698 LRRC9Q6ZRR7 1453 aa21.99■■□□□ 1.11
EXTL3-211ENST00000522698 EHBP1L1Q8N3D4 1523 aa21.99■■□□□ 1.11
EXTL3-211ENST00000522698 APLP2Q06481 763 aa21.97■■□□□ 1.11
EXTL3-211ENST00000522698 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
EXTL3-211ENST00000522698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
EXTL3-211ENST00000522698 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
EXTL3-211ENST00000522698 CDK11AQ9UQ88 783 aaPredicted RBP21.94■■□□□ 1.1
EXTL3-211ENST00000522698 KANK4Q5T7N3 995 aaPredicted RBP21.93■■□□□ 1.1
EXTL3-211ENST00000522698 KIF14Q15058 1648 aa21.92■■□□□ 1.1
EXTL3-211ENST00000522698 ARAP3Q8WWN8 1544 aa21.92■■□□□ 1.1
EXTL3-211ENST00000522698 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
EXTL3-211ENST00000522698 PLEKHD1A6NEE1 506 aa21.92■■□□□ 1.1
EXTL3-211ENST00000522698 ABCA9Q8IUA7 1624 aa21.91■■□□□ 1.1
EXTL3-211ENST00000522698 SUPT6HQ7KZ85 1726 aaKnown RBP21.91■■□□□ 1.1
EXTL3-211ENST00000522698 PHLDB1Q86UU1 1377 aa21.86■■□□□ 1.09
EXTL3-211ENST00000522698 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.84■■□□□ 1.09
EXTL3-211ENST00000522698 TTC37Q6PGP7 1564 aa21.83■■□□□ 1.09
EXTL3-211ENST00000522698 NCOA2Q15596 1464 aa21.83■■□□□ 1.08
EXTL3-211ENST00000522698 RAPGEF3O95398 923 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms