RNA–Protein interactions for RNA: ENST00000522590.1

IPCEF1-213, Transcript of interaction protein for cytohesin exchange factors 1, humanhuman

TSL 2

Gene IPCEF1, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPCEF1-213ENST00000522590 FBLN2P98095 1184 aa12.41□□□□□ -0.42
IPCEF1-213ENST00000522590 TOP2AP11388 1531 aaKnown RBP12.4□□□□□ -0.42
IPCEF1-213ENST00000522590 AQRO60306 1485 aaKnown RBP eCLIP12.38□□□□□ -0.43
IPCEF1-213ENST00000522590 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
IPCEF1-213ENST00000522590 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
IPCEF1-213ENST00000522590 DNMBPQ6XZF7 1577 aa12.35□□□□□ -0.43
IPCEF1-213ENST00000522590 CLASP1Q7Z460 1538 aa12.35□□□□□ -0.43
IPCEF1-213ENST00000522590 TARBP1Q13395 1621 aaKnown RBP12.35□□□□□ -0.43
IPCEF1-213ENST00000522590 SYNJ1O43426 1573 aa12.33□□□□□ -0.44
IPCEF1-213ENST00000522590 TULP1O00294 542 aaPredicted RBP12.31□□□□□ -0.44
IPCEF1-213ENST00000522590 WDR97A6NE52 1622 aa12.28□□□□□ -0.44
IPCEF1-213ENST00000522590 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
IPCEF1-213ENST00000522590 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.44
IPCEF1-213ENST00000522590 POLA1P09884 1462 aaPredicted RBP12.26□□□□□ -0.45
IPCEF1-213ENST00000522590 GAPVD1Q14C86 1478 aa12.26□□□□□ -0.45
IPCEF1-213ENST00000522590 SNAPC4Q5SXM2 1469 aa12.26□□□□□ -0.45
IPCEF1-213ENST00000522590 MAGI1Q96QZ7 1491 aaPredicted RBP12.25□□□□□ -0.45
IPCEF1-213ENST00000522590 ILDR1Q86SU0 546 aaPredicted RBP12.25□□□□□ -0.45
IPCEF1-213ENST00000522590 FGD1P98174 961 aa12.25□□□□□ -0.45
IPCEF1-213ENST00000522590 CCDC136Q96JN2 1154 aa12.24□□□□□ -0.45
IPCEF1-213ENST00000522590 CCDC88BA6NC98 1476 aa12.24□□□□□ -0.45
IPCEF1-213ENST00000522590 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
IPCEF1-213ENST00000522590 TDRD9Q8NDG6 1382 aaKnown RBP12.22□□□□□ -0.45
IPCEF1-213ENST00000522590 TAF7LQ5H9L4 462 aa12.22□□□□□ -0.45
IPCEF1-213ENST00000522590 SOGA1O94964 1423 aa12.21□□□□□ -0.45
IPCEF1-213ENST00000522590 SYNJ2O15056 1496 aa12.21□□□□□ -0.45
IPCEF1-213ENST00000522590 RAD54L2Q9Y4B4 1467 aa12.2□□□□□ -0.46
IPCEF1-213ENST00000522590 GRIN2BQ13224 1484 aa12.19□□□□□ -0.46
IPCEF1-213ENST00000522590 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
IPCEF1-213ENST00000522590 TSHZ2Q9NRE2 1034 aa12.12□□□□□ -0.47
IPCEF1-213ENST00000522590 NPM2Q86SE8 214 aaKnown RBP12.11□□□□□ -0.47
IPCEF1-213ENST00000522590 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
IPCEF1-213ENST00000522590 CLSPNQ9HAW4 1339 aa12.09□□□□□ -0.47
IPCEF1-213ENST00000522590 KIF13AQ9H1H9 1805 aa12.09□□□□□ -0.47
IPCEF1-213ENST00000522590 KDM4FA0A1W2PPD8 638 aa12.07□□□□□ -0.48
IPCEF1-213ENST00000522590 AAMPQ13685 434 aa12.07□□□□□ -0.48
IPCEF1-213ENST00000522590 GLIPR1L2Q4G1C9 344 aa12.07□□□□□ -0.48
IPCEF1-213ENST00000522590 PBRM1Q86U86 1689 aa12.05□□□□□ -0.48
IPCEF1-213ENST00000522590 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
IPCEF1-213ENST00000522590 CEP170Q5SW79 1584 aa12.04□□□□□ -0.48
IPCEF1-213ENST00000522590 BRD2P25440 801 aaKnown RBP12.02□□□□□ -0.48
IPCEF1-213ENST00000522590 GRIN2AQ12879 1464 aa12.02□□□□□ -0.49
IPCEF1-213ENST00000522590 ABCC10Q5T3U5 1492 aa12.02□□□□□ -0.49
IPCEF1-213ENST00000522590 FAM69CQ0P6D2 419 aa12.01□□□□□ -0.49
IPCEF1-213ENST00000522590 NUP160Q12769 1436 aa12.01□□□□□ -0.49
IPCEF1-213ENST00000522590 CHMP4AQ9BY43 222 aa12.01□□□□□ -0.49
IPCEF1-213ENST00000522590 CUX1P39880 1505 aa12□□□□□ -0.49
IPCEF1-213ENST00000522590 SHROOM2Q13796 1616 aa12□□□□□ -0.49
IPCEF1-213ENST00000522590 A0A0U1RQG5 324 aaPredicted RBP11.99□□□□□ -0.49
IPCEF1-213ENST00000522590 TAOK2Q9UL54 1235 aa11.99□□□□□ -0.49
IPCEF1-213ENST00000522590 KDM6BO15054 1643 aa11.99□□□□□ -0.49
IPCEF1-213ENST00000522590 ABCA5Q8WWZ7 1642 aa11.98□□□□□ -0.49
IPCEF1-213ENST00000522590 NPM1P06748 294 aaKnown RBP eCLIP11.98□□□□□ -0.49
IPCEF1-213ENST00000522590 ZMYND15Q9H091 742 aa11.98□□□□□ -0.49
IPCEF1-213ENST00000522590 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.98□□□□□ -0.49
IPCEF1-213ENST00000522590 ABCA10Q8WWZ4 1543 aa11.97□□□□□ -0.49
IPCEF1-213ENST00000522590 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
IPCEF1-213ENST00000522590 MAPKBP1O60336 1514 aa11.97□□□□□ -0.49
IPCEF1-213ENST00000522590 DEKP35659 375 aaKnown RBP11.96□□□□□ -0.49
IPCEF1-213ENST00000522590 RBM10P98175 930 aaKnown RBP11.96□□□□□ -0.49
IPCEF1-213ENST00000522590 C14orf37Q86TY3 774 aa11.96□□□□□ -0.49
IPCEF1-213ENST00000522590 DIP2BQ9P265 1576 aa11.95□□□□□ -0.5
IPCEF1-213ENST00000522590 ADAMTS12P58397 1594 aa11.93□□□□□ -0.5
IPCEF1-213ENST00000522590 DHX37Q8IY37 1157 aaKnown RBP11.92□□□□□ -0.5
IPCEF1-213ENST00000522590 PRG4Q92954 1404 aaPredicted RBP11.92□□□□□ -0.5
IPCEF1-213ENST00000522590 ZNF326Q5BKZ1 582 aaKnown RBP11.91□□□□□ -0.5
IPCEF1-213ENST00000522590 RSPH4AQ5TD94 716 aa11.91□□□□□ -0.5
IPCEF1-213ENST00000522590 LOC105371045A0A1W2PR82 267 aa11.91□□□□□ -0.5
IPCEF1-213ENST00000522590 FHAD1B1AJZ9 1412 aa11.91□□□□□ -0.5
IPCEF1-213ENST00000522590 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
IPCEF1-213ENST00000522590 FBXO3Q9UK99 471 aa11.89□□□□□ -0.51
IPCEF1-213ENST00000522590 ADGRL1O94910 1474 aa11.88□□□□□ -0.51
IPCEF1-213ENST00000522590 HECW2Q9P2P5 1572 aa11.88□□□□□ -0.51
IPCEF1-213ENST00000522590 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
IPCEF1-213ENST00000522590 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
IPCEF1-213ENST00000522590 FBXO41Q8TF61 875 aa11.86□□□□□ -0.51
IPCEF1-213ENST00000522590 WRNQ14191 1432 aaPredicted RBP eCLIP11.83□□□□□ -0.52
IPCEF1-213ENST00000522590 ADCY10Q96PN6 1610 aa11.82□□□□□ -0.52
IPCEF1-213ENST00000522590 ERICH3Q5RHP9 1530 aa11.82□□□□□ -0.52
IPCEF1-213ENST00000522590 TSPOAP1O95153 1857 aa11.82□□□□□ -0.52
IPCEF1-213ENST00000522590 VSIG10Q8N0Z9 540 aa11.81□□□□□ -0.52
IPCEF1-213ENST00000522590 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
IPCEF1-213ENST00000522590 TRIM26Q12899 539 aaPredicted RBP11.8□□□□□ -0.52
IPCEF1-213ENST00000522590 PAXIP1Q6ZW49 1069 aaPredicted RBP11.8□□□□□ -0.52
IPCEF1-213ENST00000522590 CDK11AQ9UQ88 783 aaPredicted RBP11.8□□□□□ -0.52
IPCEF1-213ENST00000522590 NAP1L5Q96NT1 182 aaPredicted RBP11.78□□□□□ -0.52
IPCEF1-213ENST00000522590 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
IPCEF1-213ENST00000522590 DIEXFQ68CQ4 756 aaKnown RBP11.78□□□□□ -0.52
IPCEF1-213ENST00000522590 TPRNQ4KMQ1 711 aa11.77□□□□□ -0.53
IPCEF1-213ENST00000522590 RUSC2Q8N2Y8 1516 aa11.77□□□□□ -0.53
IPCEF1-213ENST00000522590 GLI2P10070 1586 aa11.75□□□□□ -0.53
IPCEF1-213ENST00000522590 PLB1Q6P1J6 1458 aa11.73□□□□□ -0.53
IPCEF1-213ENST00000522590 TOP2BQ02880 1626 aa11.73□□□□□ -0.53
IPCEF1-213ENST00000522590 KCNA4P22459 653 aa11.72□□□□□ -0.53
IPCEF1-213ENST00000522590 CDK11BP21127 795 aaKnown RBP11.71□□□□□ -0.53
IPCEF1-213ENST00000522590 PPRC1Q5VV67 1664 aaKnown RBP11.71□□□□□ -0.54
IPCEF1-213ENST00000522590 BCCIPQ9P287 314 aaKnown RBP eCLIP11.71□□□□□ -0.54
IPCEF1-213ENST00000522590 HSP90B1P14625 803 aaKnown RBP11.7□□□□□ -0.54
IPCEF1-213ENST00000522590 BCANQ96GW7 911 aa11.7□□□□□ -0.54
IPCEF1-213ENST00000522590 RBM19Q9Y4C8 960 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms