RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 P3H3Q8IVL6 736 aa19.89■□□□□ 0.77
PABPC1-219ENST00000522387 OSCARQ8IYS5 282 aa19.88■□□□□ 0.77
PABPC1-219ENST00000522387 TTBK1Q5TCY1 1321 aaPredicted RBP19.88■□□□□ 0.77
PABPC1-219ENST00000522387 TNIKQ9UKE5 1360 aa19.87■□□□□ 0.77
PABPC1-219ENST00000522387 NUP160Q12769 1436 aa19.84■□□□□ 0.77
PABPC1-219ENST00000522387 CTTNBP2Q8WZ74 1663 aa19.82■□□□□ 0.76
PABPC1-219ENST00000522387 JPH4Q96JJ6 628 aa19.81■□□□□ 0.76
PABPC1-219ENST00000522387 CEP162Q5TB80 1403 aa19.8■□□□□ 0.76
PABPC1-219ENST00000522387 KIAA0586Q9BVV6 1533 aa19.8■□□□□ 0.76
PABPC1-219ENST00000522387 IQGAP2Q13576 1575 aa19.79■□□□□ 0.76
PABPC1-219ENST00000522387 CLIP1P30622 1438 aa19.75■□□□□ 0.75
PABPC1-219ENST00000522387 CLASP1Q7Z460 1538 aa19.7■□□□□ 0.74
PABPC1-219ENST00000522387 PRG4Q92954 1404 aaPredicted RBP19.7■□□□□ 0.74
PABPC1-219ENST00000522387 FHOD3Q2V2M9 1422 aa19.69■□□□□ 0.74
PABPC1-219ENST00000522387 ARHGAP35Q9NRY4 1499 aa19.68■□□□□ 0.74
PABPC1-219ENST00000522387 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
PABPC1-219ENST00000522387 ATP1B4Q9UN42 357 aaPredicted RBP19.65■□□□□ 0.74
PABPC1-219ENST00000522387 DISP1Q96F81 1524 aa19.64■□□□□ 0.73
PABPC1-219ENST00000522387 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
PABPC1-219ENST00000522387 UGGT2Q9NYU1 1516 aa19.62■□□□□ 0.73
PABPC1-219ENST00000522387 ARID3CA6NKF2 412 aa19.62■□□□□ 0.73
PABPC1-219ENST00000522387 CARMIL2Q6F5E8 1435 aa19.6■□□□□ 0.73
PABPC1-219ENST00000522387 KIAA0556O60303 1618 aa19.59■□□□□ 0.73
PABPC1-219ENST00000522387 SHROOM2Q13796 1616 aa19.58■□□□□ 0.72
PABPC1-219ENST00000522387 SAMD9Q5K651 1589 aa19.57■□□□□ 0.72
PABPC1-219ENST00000522387 EFCAB5A4FU69 1503 aa19.55■□□□□ 0.72
PABPC1-219ENST00000522387 PPARGC1BQ86YN6 1023 aaKnown RBP19.53■□□□□ 0.72
PABPC1-219ENST00000522387 CYB5RLQ6IPT4 315 aa19.51■□□□□ 0.71
PABPC1-219ENST00000522387 PTPRGP23470 1445 aa19.51■□□□□ 0.71
PABPC1-219ENST00000522387 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
PABPC1-219ENST00000522387 PLB1Q6P1J6 1458 aa19.48■□□□□ 0.71
PABPC1-219ENST00000522387 VPS8Q8N3P4 1428 aa19.46■□□□□ 0.71
PABPC1-219ENST00000522387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.45■□□□□ 0.7
PABPC1-219ENST00000522387 HNRNPUL2Q1KMD3 747 aaKnown RBP19.45■□□□□ 0.7
PABPC1-219ENST00000522387 FMN1Q68DA7 1419 aa19.44■□□□□ 0.7
PABPC1-219ENST00000522387 RIMBP3CA6NJZ7 1639 aa19.44■□□□□ 0.7
PABPC1-219ENST00000522387 RIMBP3BA6NNM3 1639 aa19.44■□□□□ 0.7
PABPC1-219ENST00000522387 RIMBP3Q9UFD9 1639 aa19.44■□□□□ 0.7
PABPC1-219ENST00000522387 PCF11O94913 1555 aaKnown RBP19.41■□□□□ 0.7
PABPC1-219ENST00000522387 APLP2Q06481 763 aa19.38■□□□□ 0.69
PABPC1-219ENST00000522387 DNAJC5Q9H3Z4 198 aa19.38■□□□□ 0.69
PABPC1-219ENST00000522387 UACAQ9BZF9 1416 aa19.35■□□□□ 0.69
PABPC1-219ENST00000522387 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
PABPC1-219ENST00000522387 RAPGEF6Q8TEU7 1601 aa19.34■□□□□ 0.69
PABPC1-219ENST00000522387 CDK13Q14004 1512 aaKnown RBP19.33■□□□□ 0.68
PABPC1-219ENST00000522387 NUP153P49790 1475 aaKnown RBP19.32■□□□□ 0.68
PABPC1-219ENST00000522387 KANK4Q5T7N3 995 aaPredicted RBP19.31■□□□□ 0.68
PABPC1-219ENST00000522387 FYCO1Q9BQS8 1478 aa19.31■□□□□ 0.68
PABPC1-219ENST00000522387 ABCA8O94911 1581 aa19.3■□□□□ 0.68
PABPC1-219ENST00000522387 LRRIQ1Q96JM4 1722 aa19.3■□□□□ 0.68
PABPC1-219ENST00000522387 ADCY10Q96PN6 1610 aa19.28■□□□□ 0.68
PABPC1-219ENST00000522387 EPRSP07814 1512 aaKnown RBP19.27■□□□□ 0.68
PABPC1-219ENST00000522387 HECW1Q76N89 1606 aa19.27■□□□□ 0.67
PABPC1-219ENST00000522387 ABCC2Q92887 1545 aa19.26■□□□□ 0.67
PABPC1-219ENST00000522387 ATP10BO94823 1461 aa19.25■□□□□ 0.67
PABPC1-219ENST00000522387 NPM1P06748 294 aaKnown RBP eCLIP19.24■□□□□ 0.67
PABPC1-219ENST00000522387 KCNH8Q96L42 1107 aa19.23■□□□□ 0.67
PABPC1-219ENST00000522387 MTUS2Q5JR59 1369 aa19.2■□□□□ 0.66
PABPC1-219ENST00000522387 TIAM1Q13009 1591 aa19.2■□□□□ 0.66
PABPC1-219ENST00000522387 PLEKHD1A6NEE1 506 aa19.18■□□□□ 0.66
PABPC1-219ENST00000522387 UHRF1BP1LA0JNW5 1464 aa19.17■□□□□ 0.66
PABPC1-219ENST00000522387 CCDC18Q5T9S5 1454 aa19.17■□□□□ 0.66
PABPC1-219ENST00000522387 ZCCHC11Q5TAX3 1644 aaKnown RBP19.17■□□□□ 0.66
PABPC1-219ENST00000522387 MAGI3Q5TCQ9 1506 aa19.17■□□□□ 0.66
PABPC1-219ENST00000522387 CDK11AQ9UQ88 783 aaPredicted RBP19.16■□□□□ 0.66
PABPC1-219ENST00000522387 KDM5BQ9UGL1 1544 aa19.15■□□□□ 0.66
PABPC1-219ENST00000522387 LRRC9Q6ZRR7 1453 aa19.14■□□□□ 0.65
PABPC1-219ENST00000522387 CFAP43Q8NDM7 1665 aa19.13■□□□□ 0.65
PABPC1-219ENST00000522387 ASXL2Q76L83 1435 aa19.1■□□□□ 0.65
PABPC1-219ENST00000522387 PCGF6Q9BYE7 350 aa19.07■□□□□ 0.64
PABPC1-219ENST00000522387 MAP3K1Q13233 1512 aa19.06■□□□□ 0.64
PABPC1-219ENST00000522387 TROQ12816 1431 aaPredicted RBP19.06■□□□□ 0.64
PABPC1-219ENST00000522387 KIF14Q15058 1648 aa19.05■□□□□ 0.64
PABPC1-219ENST00000522387 WDR7Q9Y4E6 1490 aa19.03■□□□□ 0.64
PABPC1-219ENST00000522387 EHBP1L1Q8N3D4 1523 aa19.02■□□□□ 0.64
PABPC1-219ENST00000522387 NCOA2Q15596 1464 aa19.01■□□□□ 0.63
PABPC1-219ENST00000522387 PHLDB1Q86UU1 1377 aa19.01■□□□□ 0.63
PABPC1-219ENST00000522387 FAM69CQ0P6D2 419 aa18.99■□□□□ 0.63
PABPC1-219ENST00000522387 ZNF777Q9ULD5 760 aaPredicted RBP18.99■□□□□ 0.63
PABPC1-219ENST00000522387 SUPT6HQ7KZ85 1726 aaKnown RBP18.98■□□□□ 0.63
PABPC1-219ENST00000522387 TRHP20396 242 aaPredicted RBP18.98■□□□□ 0.63
PABPC1-219ENST00000522387 CCNB3Q8WWL7 1395 aa18.96■□□□□ 0.63
PABPC1-219ENST00000522387 MAPKBP1O60336 1514 aa18.94■□□□□ 0.62
PABPC1-219ENST00000522387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.94■□□□□ 0.627e-8■□□□□ 10.3
PABPC1-219ENST00000522387 TTC37Q6PGP7 1564 aa18.94■□□□□ 0.62
PABPC1-219ENST00000522387 ITGAEP38570 1179 aa18.94■□□□□ 0.62
PABPC1-219ENST00000522387 FAM50AQ14320 339 aaKnown RBP18.94■□□□□ 0.62
PABPC1-219ENST00000522387 ZNF644Q9H582 1327 aaPredicted RBP18.93■□□□□ 0.62
PABPC1-219ENST00000522387 HRCP23327 699 aa18.92■□□□□ 0.62
PABPC1-219ENST00000522387 CFDP1Q9UEE9 299 aaPredicted RBP18.92■□□□□ 0.62
PABPC1-219ENST00000522387 ABCC10Q5T3U5 1492 aa18.89■□□□□ 0.62
PABPC1-219ENST00000522387 GPATCH8Q9UKJ3 1502 aaKnown RBP18.88■□□□□ 0.61
PABPC1-219ENST00000522387 MYOM3Q5VTT5 1437 aa18.88■□□□□ 0.61
PABPC1-219ENST00000522387 CD109Q6YHK3 1445 aa18.86■□□□□ 0.61
PABPC1-219ENST00000522387 TSPOAP1O95153 1857 aa18.86■□□□□ 0.61
PABPC1-219ENST00000522387 CDC42BPAQ5VT25 1732 aa18.85■□□□□ 0.61
PABPC1-219ENST00000522387 DIP2BQ9P265 1576 aa18.85■□□□□ 0.61
PABPC1-219ENST00000522387 FGD6Q6ZV73 1430 aa18.85■□□□□ 0.61
PABPC1-219ENST00000522387 ARHGAP5Q13017 1502 aa18.84■□□□□ 0.61
PABPC1-219ENST00000522387 TRIM26Q12899 539 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms