RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 RANGAP1P46060 587 aaPredicted RBP21.61■■□□□ 1.05
CLK4-210ENST00000522136 CTTNBP2Q8WZ74 1663 aa21.61■■□□□ 1.05
CLK4-210ENST00000522136 NUP160Q12769 1436 aa21.59■■□□□ 1.05
CLK4-210ENST00000522136 KIAA0586Q9BVV6 1533 aa21.54■■□□□ 1.04
CLK4-210ENST00000522136 CEP162Q5TB80 1403 aa21.52■■□□□ 1.04
CLK4-210ENST00000522136 IQGAP2Q13576 1575 aa21.51■■□□□ 1.03
CLK4-210ENST00000522136 OSCARQ8IYS5 282 aa21.48■■□□□ 1.03
CLK4-210ENST00000522136 CLIP1P30622 1438 aa21.46■■□□□ 1.03
CLK4-210ENST00000522136 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
CLK4-210ENST00000522136 CLASP1Q7Z460 1538 aa21.44■■□□□ 1.02
CLK4-210ENST00000522136 P3H3Q8IVL6 736 aa21.42■■□□□ 1.02
CLK4-210ENST00000522136 ARHGAP35Q9NRY4 1499 aa21.4■■□□□ 1.02
CLK4-210ENST00000522136 UGGT2Q9NYU1 1516 aa21.4■■□□□ 1.02
CLK4-210ENST00000522136 SHROOM2Q13796 1616 aa21.35■■□□□ 1.01
CLK4-210ENST00000522136 SAMD9Q5K651 1589 aa21.35■■□□□ 1.01
CLK4-210ENST00000522136 DISP1Q96F81 1524 aa21.34■■□□□ 1.01
CLK4-210ENST00000522136 PRG4Q92954 1404 aaPredicted RBP21.33■■□□□ 1.01
CLK4-210ENST00000522136 EFCAB5A4FU69 1503 aa21.33■■□□□ 1.01
CLK4-210ENST00000522136 ARAP1Q96P48 1450 aa21.33■■□□□ 1
CLK4-210ENST00000522136 FHOD3Q2V2M9 1422 aa21.32■■□□□ 1
CLK4-210ENST00000522136 KIAA0556O60303 1618 aa21.3■■□□□ 1
CLK4-210ENST00000522136 ERCC6L2Q5T890 1561 aa21.29■■□□□ 1
CLK4-210ENST00000522136 TTBK1Q5TCY1 1321 aaPredicted RBP21.28■■□□□ 1
CLK4-210ENST00000522136 CARMIL2Q6F5E8 1435 aa21.27■■□□□ 1
CLK4-210ENST00000522136 VPS8Q8N3P4 1428 aa21.19■□□□□ 0.98
CLK4-210ENST00000522136 FMN1Q68DA7 1419 aa21.15■□□□□ 0.98
CLK4-210ENST00000522136 PTPRGP23470 1445 aa21.14■□□□□ 0.97
CLK4-210ENST00000522136 ATP1B4Q9UN42 357 aaPredicted RBP21.12■□□□□ 0.97
CLK4-210ENST00000522136 ARHGEF11O15085 1522 aa21.11■□□□□ 0.97
CLK4-210ENST00000522136 PCF11O94913 1555 aaKnown RBP21.11■□□□□ 0.97
CLK4-210ENST00000522136 PLB1Q6P1J6 1458 aa21.09■□□□□ 0.97
CLK4-210ENST00000522136 RIMBP3CA6NJZ7 1639 aa21.07■□□□□ 0.96
CLK4-210ENST00000522136 RIMBP3BA6NNM3 1639 aa21.07■□□□□ 0.96
CLK4-210ENST00000522136 RIMBP3Q9UFD9 1639 aa21.07■□□□□ 0.96
CLK4-210ENST00000522136 CASKIN1Q8WXD9 1431 aa21.07■□□□□ 0.96
CLK4-210ENST00000522136 RAPGEF6Q8TEU7 1601 aa21.04■□□□□ 0.96
CLK4-210ENST00000522136 FYCO1Q9BQS8 1478 aa21.04■□□□□ 0.96
CLK4-210ENST00000522136 ARID3CA6NKF2 412 aa21.03■□□□□ 0.96
CLK4-210ENST00000522136 ABCA8O94911 1581 aa21.03■□□□□ 0.96
CLK4-210ENST00000522136 LRRIQ1Q96JM4 1722 aa21■□□□□ 0.95
CLK4-210ENST00000522136 UACAQ9BZF9 1416 aa21■□□□□ 0.95
CLK4-210ENST00000522136 PPARGC1BQ86YN6 1023 aaKnown RBP20.99■□□□□ 0.95
CLK4-210ENST00000522136 HECW1Q76N89 1606 aa20.99■□□□□ 0.95
CLK4-210ENST00000522136 NUP153P49790 1475 aaKnown RBP20.98■□□□□ 0.95
CLK4-210ENST00000522136 APLP2Q06481 763 aa20.97■□□□□ 0.95
CLK4-210ENST00000522136 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
CLK4-210ENST00000522136 CDK13Q14004 1512 aaKnown RBP20.94■□□□□ 0.94
CLK4-210ENST00000522136 ABCC2Q92887 1545 aa20.94■□□□□ 0.94
CLK4-210ENST00000522136 EPRSP07814 1512 aaKnown RBP20.94■□□□□ 0.94
CLK4-210ENST00000522136 ADCY10Q96PN6 1610 aa20.92■□□□□ 0.94
CLK4-210ENST00000522136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.91■□□□□ 0.94
CLK4-210ENST00000522136 HNRNPUL2Q1KMD3 747 aaKnown RBP20.91■□□□□ 0.94
CLK4-210ENST00000522136 KANK4Q5T7N3 995 aaPredicted RBP20.91■□□□□ 0.94
CLK4-210ENST00000522136 TIAM1Q13009 1591 aa20.91■□□□□ 0.94
CLK4-210ENST00000522136 UHRF1BP1LA0JNW5 1464 aa20.9■□□□□ 0.94
CLK4-210ENST00000522136 ATP10BO94823 1461 aa20.9■□□□□ 0.94
CLK4-210ENST00000522136 DNAJC5Q9H3Z4 198 aa20.9■□□□□ 0.94
CLK4-210ENST00000522136 CFAP43Q8NDM7 1665 aa20.89■□□□□ 0.93
CLK4-210ENST00000522136 CCDC18Q5T9S5 1454 aa20.89■□□□□ 0.93
CLK4-210ENST00000522136 MAP3K1Q13233 1512 aa20.88■□□□□ 0.93
CLK4-210ENST00000522136 KDM5BQ9UGL1 1544 aa20.83■□□□□ 0.92
CLK4-210ENST00000522136 ZCCHC11Q5TAX3 1644 aaKnown RBP20.83■□□□□ 0.92
CLK4-210ENST00000522136 MAGI3Q5TCQ9 1506 aa20.82■□□□□ 0.92
CLK4-210ENST00000522136 LRRC9Q6ZRR7 1453 aa20.82■□□□□ 0.92
CLK4-210ENST00000522136 MTUS2Q5JR59 1369 aa20.8■□□□□ 0.92
CLK4-210ENST00000522136 AEBP2Q6ZN18 517 aaPredicted RBP20.77■□□□□ 0.92
CLK4-210ENST00000522136 CDK11AQ9UQ88 783 aaPredicted RBP20.77■□□□□ 0.92
CLK4-210ENST00000522136 PLEKHD1A6NEE1 506 aa20.77■□□□□ 0.92
CLK4-210ENST00000522136 NPM1P06748 294 aaKnown RBP eCLIP20.77■□□□□ 0.92
CLK4-210ENST00000522136 EHBP1L1Q8N3D4 1523 aa20.73■□□□□ 0.91
CLK4-210ENST00000522136 TROQ12816 1431 aaPredicted RBP20.72■□□□□ 0.91
CLK4-210ENST00000522136 KCNH8Q96L42 1107 aa20.69■□□□□ 0.9
CLK4-210ENST00000522136 ASXL2Q76L83 1435 aa20.69■□□□□ 0.9
CLK4-210ENST00000522136 SUPT6HQ7KZ85 1726 aaKnown RBP20.68■□□□□ 0.9
CLK4-210ENST00000522136 KIF14Q15058 1648 aa20.67■□□□□ 0.9
CLK4-210ENST00000522136 NCOA2Q15596 1464 aa20.66■□□□□ 0.9
CLK4-210ENST00000522136 WDR7Q9Y4E6 1490 aa20.65■□□□□ 0.9
CLK4-210ENST00000522136 PHLDB1Q86UU1 1377 aa20.63■□□□□ 0.89
CLK4-210ENST00000522136 MAPKBP1O60336 1514 aa20.61■□□□□ 0.89
CLK4-210ENST00000522136 ABCC10Q5T3U5 1492 aa20.58■□□□□ 0.89
CLK4-210ENST00000522136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.57■□□□□ 0.88
CLK4-210ENST00000522136 TTC37Q6PGP7 1564 aa20.56■□□□□ 0.88
CLK4-210ENST00000522136 CCNB3Q8WWL7 1395 aa20.56■□□□□ 0.88
CLK4-210ENST00000522136 MYOM3Q5VTT5 1437 aa20.53■□□□□ 0.88
CLK4-210ENST00000522136 GPATCH8Q9UKJ3 1502 aaKnown RBP20.52■□□□□ 0.88
CLK4-210ENST00000522136 CDC42BPAQ5VT25 1732 aa20.52■□□□□ 0.88
CLK4-210ENST00000522136 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
CLK4-210ENST00000522136 ABCA9Q8IUA7 1624 aa20.49■□□□□ 0.87
CLK4-210ENST00000522136 FGD6Q6ZV73 1430 aa20.49■□□□□ 0.87
CLK4-210ENST00000522136 CFDP1Q9UEE9 299 aaPredicted RBP20.48■□□□□ 0.87
CLK4-210ENST00000522136 ITSN2Q9NZM3 1697 aa20.47■□□□□ 0.87
CLK4-210ENST00000522136 FAM69CQ0P6D2 419 aa20.47■□□□□ 0.87
CLK4-210ENST00000522136 RRBP1Q9P2E9 1410 aaKnown RBP20.47■□□□□ 0.87
CLK4-210ENST00000522136 MYO5CQ9NQX4 1742 aa20.47■□□□□ 0.87
CLK4-210ENST00000522136 CDC42BPBQ9Y5S2 1711 aa20.47■□□□□ 0.87
CLK4-210ENST00000522136 DIP2BQ9P265 1576 aa20.46■□□□□ 0.87
CLK4-210ENST00000522136 FAM50AQ14320 339 aaKnown RBP20.45■□□□□ 0.86
CLK4-210ENST00000522136 ZNF644Q9H582 1327 aaPredicted RBP20.45■□□□□ 0.86
CLK4-210ENST00000522136 PREX2Q70Z35 1606 aa20.45■□□□□ 0.86
CLK4-210ENST00000522136 ZNF777Q9ULD5 760 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms