RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 KDM4FA0A1W2PPD8 638 aa17.05■□□□□ 0.32
TRAPPC9-212ENST00000521944 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
TRAPPC9-212ENST00000521944 FGD5Q6ZNL6 1462 aa17.02■□□□□ 0.32
TRAPPC9-212ENST00000521944 WDR97A6NE52 1622 aa17.02■□□□□ 0.31
TRAPPC9-212ENST00000521944 KIF13AQ9H1H9 1805 aa16.98■□□□□ 0.31
TRAPPC9-212ENST00000521944 DCAF8L1A6NGE4 600 aa16.94■□□□□ 0.3
TRAPPC9-212ENST00000521944 CUX1P39880 1505 aa16.93■□□□□ 0.3
TRAPPC9-212ENST00000521944 CEP170Q5SW79 1584 aa16.89■□□□□ 0.3
TRAPPC9-212ENST00000521944 PBRM1Q86U86 1689 aa16.87■□□□□ 0.29
TRAPPC9-212ENST00000521944 FAM69CQ0P6D2 419 aa16.85■□□□□ 0.29
TRAPPC9-212ENST00000521944 NUP160Q12769 1436 aa16.85■□□□□ 0.29
TRAPPC9-212ENST00000521944 GRIN2AQ12879 1464 aa16.84■□□□□ 0.29
TRAPPC9-212ENST00000521944 ABCC10Q5T3U5 1492 aa16.82■□□□□ 0.28
TRAPPC9-212ENST00000521944 SHROOM2Q13796 1616 aa16.81■□□□□ 0.28
TRAPPC9-212ENST00000521944 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
TRAPPC9-212ENST00000521944 ABCA10Q8WWZ4 1543 aa16.79■□□□□ 0.28
TRAPPC9-212ENST00000521944 DIP2BQ9P265 1576 aa16.72■□□□□ 0.27
TRAPPC9-212ENST00000521944 PRG4Q92954 1404 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC9-212ENST00000521944 KDM6BO15054 1643 aa16.72■□□□□ 0.27
TRAPPC9-212ENST00000521944 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
TRAPPC9-212ENST00000521944 MAPKBP1O60336 1514 aa16.7■□□□□ 0.26
TRAPPC9-212ENST00000521944 JPH4Q96JJ6 628 aa16.69■□□□□ 0.26
TRAPPC9-212ENST00000521944 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-212ENST00000521944 FHAD1B1AJZ9 1412 aa16.66■□□□□ 0.26
TRAPPC9-212ENST00000521944 NPM1P06748 294 aaKnown RBP eCLIP16.63■□□□□ 0.25
TRAPPC9-212ENST00000521944 ADCY10Q96PN6 1610 aa16.63■□□□□ 0.25
TRAPPC9-212ENST00000521944 ADGRL1O94910 1474 aa16.62■□□□□ 0.25
TRAPPC9-212ENST00000521944 HECW2Q9P2P5 1572 aa16.62■□□□□ 0.25
TRAPPC9-212ENST00000521944 TSPOAP1O95153 1857 aa16.62■□□□□ 0.25
TRAPPC9-212ENST00000521944 WRNQ14191 1432 aaPredicted RBP eCLIP16.56■□□□□ 0.24
TRAPPC9-212ENST00000521944 COL17A1Q9UMD9 1497 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC9-212ENST00000521944 ERICH3Q5RHP9 1530 aa16.52■□□□□ 0.24
TRAPPC9-212ENST00000521944 FBXO41Q8TF61 875 aa16.52■□□□□ 0.24
TRAPPC9-212ENST00000521944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRAPPC9-212ENST00000521944 PPRC1Q5VV67 1664 aaKnown RBP16.49■□□□□ 0.23
TRAPPC9-212ENST00000521944 RUSC2Q8N2Y8 1516 aa16.49■□□□□ 0.23
TRAPPC9-212ENST00000521944 GLI2P10070 1586 aa16.4■□□□□ 0.22
TRAPPC9-212ENST00000521944 TOP2BQ02880 1626 aa16.4■□□□□ 0.22
TRAPPC9-212ENST00000521944 ASXL2Q76L83 1435 aa16.39■□□□□ 0.21
TRAPPC9-212ENST00000521944 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
TRAPPC9-212ENST00000521944 KIAA0586Q9BVV6 1533 aa16.37■□□□□ 0.21
TRAPPC9-212ENST00000521944 PTPRGP23470 1445 aa16.36■□□□□ 0.21
TRAPPC9-212ENST00000521944 ABCC2Q92887 1545 aa16.36■□□□□ 0.21
TRAPPC9-212ENST00000521944 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
TRAPPC9-212ENST00000521944 TTBK1Q5TCY1 1321 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC9-212ENST00000521944 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
TRAPPC9-212ENST00000521944 RNF39Q9H2S5 420 aa16.3■□□□□ 0.2
TRAPPC9-212ENST00000521944 EPRSP07814 1512 aaKnown RBP16.29■□□□□ 0.2
TRAPPC9-212ENST00000521944 MAP3K4Q9Y6R4 1608 aa16.28■□□□□ 0.2
TRAPPC9-212ENST00000521944 IGF1RP08069 1367 aa16.26■□□□□ 0.19
TRAPPC9-212ENST00000521944 LMTK3Q96Q04 1460 aa16.26■□□□□ 0.19
TRAPPC9-212ENST00000521944 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
TRAPPC9-212ENST00000521944 UHRF1BP1LA0JNW5 1464 aa16.25■□□□□ 0.19
TRAPPC9-212ENST00000521944 ILDR2Q71H61 639 aa16.24■□□□□ 0.19
TRAPPC9-212ENST00000521944 CUL7Q14999 1698 aa16.24■□□□□ 0.19
TRAPPC9-212ENST00000521944 TEX14Q8IWB6 1497 aa16.22■□□□□ 0.19
TRAPPC9-212ENST00000521944 UACAQ9BZF9 1416 aa16.2■□□□□ 0.18
TRAPPC9-212ENST00000521944 KDM5BQ9UGL1 1544 aa16.2■□□□□ 0.18
TRAPPC9-212ENST00000521944 FOXD4L1Q9NU39 408 aa16.18■□□□□ 0.18
TRAPPC9-212ENST00000521944 C1QBPQ07021 282 aaKnown RBP16.17■□□□□ 0.18
TRAPPC9-212ENST00000521944 SOCS7O14512 581 aa16.16■□□□□ 0.18
TRAPPC9-212ENST00000521944 CARMIL2Q6F5E8 1435 aa16.16■□□□□ 0.18
TRAPPC9-212ENST00000521944 DISP1Q96F81 1524 aa16.14■□□□□ 0.17
TRAPPC9-212ENST00000521944 U3KPZ7 1027 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC9-212ENST00000521944 PTPRMP28827 1452 aa16.13■□□□□ 0.17
TRAPPC9-212ENST00000521944 KIF21BO75037 1637 aa16.12■□□□□ 0.17
TRAPPC9-212ENST00000521944 ZCCHC11Q5TAX3 1644 aaKnown RBP16.11■□□□□ 0.17
TRAPPC9-212ENST00000521944 MAGI3Q5TCQ9 1506 aa16.09■□□□□ 0.17
TRAPPC9-212ENST00000521944 CARMIL1Q5VZK9 1371 aa16.08■□□□□ 0.16
TRAPPC9-212ENST00000521944 CD109Q6YHK3 1445 aa16.08■□□□□ 0.16
TRAPPC9-212ENST00000521944 WDR7Q9Y4E6 1490 aa16.08■□□□□ 0.16
TRAPPC9-212ENST00000521944 ADAMTSL3P82987 1691 aa16.08■□□□□ 0.16
TRAPPC9-212ENST00000521944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC9-212ENST00000521944 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
TRAPPC9-212ENST00000521944 KIF27Q86VH2 1401 aa16.06■□□□□ 0.16
TRAPPC9-212ENST00000521944 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC9-212ENST00000521944 PCF11O94913 1555 aaKnown RBP16.05■□□□□ 0.16
TRAPPC9-212ENST00000521944 IQGAP2Q13576 1575 aa16.05■□□□□ 0.16
TRAPPC9-212ENST00000521944 DISP3Q9P2K9 1392 aa16.04■□□□□ 0.16
TRAPPC9-212ENST00000521944 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
TRAPPC9-212ENST00000521944 CERKQ8TCT0 537 aa16.03■□□□□ 0.16
TRAPPC9-212ENST00000521944 KCNH8Q96L42 1107 aa16.03■□□□□ 0.16
TRAPPC9-212ENST00000521944 ARAP3Q8WWN8 1544 aa16.01■□□□□ 0.15
TRAPPC9-212ENST00000521944 HSPA2P54652 639 aa16.01■□□□□ 0.15
TRAPPC9-212ENST00000521944 CACNB1Q02641 598 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC9-212ENST00000521944 ZBTB22O15209 634 aa15.99■□□□□ 0.15
TRAPPC9-212ENST00000521944 CFAP43Q8NDM7 1665 aa15.99■□□□□ 0.15
TRAPPC9-212ENST00000521944 APLP2Q06481 763 aa15.98■□□□□ 0.15
TRAPPC9-212ENST00000521944 EHMT2Q96KQ7 1210 aa15.98■□□□□ 0.15
TRAPPC9-212ENST00000521944 UGGT2Q9NYU1 1516 aa15.98■□□□□ 0.15
TRAPPC9-212ENST00000521944 SAMD1Q6SPF0 538 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC9-212ENST00000521944 RAPGEF3O95398 923 aa15.95■□□□□ 0.14
TRAPPC9-212ENST00000521944 MADDQ8WXG6 1647 aa15.94■□□□□ 0.14
TRAPPC9-212ENST00000521944 BCORL1Q5H9F3 1711 aa15.93■□□□□ 0.14
TRAPPC9-212ENST00000521944 KIAA0556O60303 1618 aa15.93■□□□□ 0.14
TRAPPC9-212ENST00000521944 ABCA8O94911 1581 aa15.88■□□□□ 0.13
TRAPPC9-212ENST00000521944 ARID4BQ4LE39 1312 aaPredicted RBP15.86■□□□□ 0.13
TRAPPC9-212ENST00000521944 FRMPD1Q5SYB0 1578 aa15.84■□□□□ 0.13
TRAPPC9-212ENST00000521944 PHLDB1Q86UU1 1377 aa15.84■□□□□ 0.13
TRAPPC9-212ENST00000521944 RIMS1Q86UR5 1692 aaKnown RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms