RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	RAPGEF2	Q9Y4G8	1499 aa		14.08	□□□□□ -0.16
CTNNA1-231	ENST00000521941	PRG4	Q92954	1404 aa	Predicted RBP	14.07	□□□□□ -0.16
CTNNA1-231	ENST00000521941	KIAA0586	Q9BVV6	1533 aa		14.06	□□□□□ -0.16
CTNNA1-231	ENST00000521941	CHIC1	Q5VXU3	224 aa		14.05	□□□□□ -0.16
CTNNA1-231	ENST00000521941	JPH4	Q96JJ6	628 aa		14.05	□□□□□ -0.16
CTNNA1-231	ENST00000521941	IQGAP2	Q13576	1575 aa		14.04	□□□□□ -0.16
CTNNA1-231	ENST00000521941	FAM9A	Q8IZU1	332 aa	Predicted RBP	14.03	□□□□□ -0.16
CTNNA1-231	ENST00000521941	CTTNBP2	Q8WZ74	1663 aa		14.03	□□□□□ -0.16
CTNNA1-231	ENST00000521941	PRX	Q9BXM0	1461 aa		13.99	□□□□□ -0.17
CTNNA1-231	ENST00000521941	EEA1	Q15075	1411 aa		13.98	□□□□□ -0.17
CTNNA1-231	ENST00000521941	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.98	□□□□□ -0.17
CTNNA1-231	ENST00000521941	CSRNP3	Q8WYN3	585 aa		13.97	□□□□□ -0.17
CTNNA1-231	ENST00000521941	CARMIL2	Q6F5E8	1435 aa		13.94	□□□□□ -0.18
CTNNA1-231	ENST00000521941	UGGT2	Q9NYU1	1516 aa		13.92	□□□□□ -0.18
CTNNA1-231	ENST00000521941	TRH	P20396	242 aa	Predicted RBP	13.92	□□□□□ -0.18
CTNNA1-231	ENST00000521941	EHMT2	Q96KQ7	1210 aa		13.92	□□□□□ -0.18
CTNNA1-231	ENST00000521941	KIAA0556	O60303	1618 aa		13.92	□□□□□ -0.18
CTNNA1-231	ENST00000521941	DISP1	Q96F81	1524 aa		13.9	□□□□□ -0.18
CTNNA1-231	ENST00000521941	KIF21B	O75037	1637 aa		13.9	□□□□□ -0.19
CTNNA1-231	ENST00000521941	ADCY10	Q96PN6	1610 aa		13.89	□□□□□ -0.19
CTNNA1-231	ENST00000521941	TNIK	Q9UKE5	1360 aa		13.88	□□□□□ -0.19
CTNNA1-231	ENST00000521941	PTPRG	P23470	1445 aa		13.88	□□□□□ -0.19
CTNNA1-231	ENST00000521941	RANGAP1	P46060	587 aa	Predicted RBP	13.85	□□□□□ -0.19
CTNNA1-231	ENST00000521941	GOLGA3	Q08378	1498 aa		13.84	□□□□□ -0.19
CTNNA1-231	ENST00000521941	NPM1	P06748	294 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
CTNNA1-231	ENST00000521941	P3H3	Q8IVL6	736 aa		13.81	□□□□□ -0.2
CTNNA1-231	ENST00000521941	UACA	Q9BZF9	1416 aa		13.79	□□□□□ -0.2
CTNNA1-231	ENST00000521941	ABCC2	Q92887	1545 aa		13.79	□□□□□ -0.2
CTNNA1-231	ENST00000521941	SAMD9	Q5K651	1589 aa		13.79	□□□□□ -0.2
CTNNA1-231	ENST00000521941	UBTF	P17480	764 aa	Known RBP	13.78	□□□□□ -0.2
CTNNA1-231	ENST00000521941	PLB1	Q6P1J6	1458 aa		13.77	□□□□□ -0.21
CTNNA1-231	ENST00000521941	KIF13A	Q9H1H9	1805 aa		13.77	□□□□□ -0.21
CTNNA1-231	ENST00000521941	MAPKBP1	O60336	1514 aa		13.76	□□□□□ -0.21
CTNNA1-231	ENST00000521941	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.75	□□□□□ -0.21
CTNNA1-231	ENST00000521941	UHRF1BP1L	A0JNW5	1464 aa		13.74	□□□□□ -0.21
CTNNA1-231	ENST00000521941	ABCA8	O94911	1581 aa		13.74	□□□□□ -0.21
CTNNA1-231	ENST00000521941	FHOD3	Q2V2M9	1422 aa		13.73	□□□□□ -0.21
CTNNA1-231	ENST00000521941	DIP2B	Q9P265	1576 aa		13.73	□□□□□ -0.21
CTNNA1-231	ENST00000521941	EFCAB5	A4FU69	1503 aa		13.71	□□□□□ -0.21
CTNNA1-231	ENST00000521941	ABCC10	Q5T3U5	1492 aa		13.7	□□□□□ -0.22
CTNNA1-231	ENST00000521941	ARID3C	A6NKF2	412 aa		13.7	□□□□□ -0.22
CTNNA1-231	ENST00000521941	ASXL2	Q76L83	1435 aa		13.7	□□□□□ -0.22
CTNNA1-231	ENST00000521941	KDM5B	Q9UGL1	1544 aa		13.69	□□□□□ -0.22
CTNNA1-231	ENST00000521941	RAPGEF6	Q8TEU7	1601 aa		13.69	□□□□□ -0.22
CTNNA1-231	ENST00000521941	FAM69C	Q0P6D2	419 aa		13.69	□□□□□ -0.22
CTNNA1-231	ENST00000521941	TSPOAP1	O95153	1857 aa		13.69	□□□□□ -0.22
CTNNA1-231	ENST00000521941	ARHGAP35	Q9NRY4	1499 aa		13.64	□□□□□ -0.23
CTNNA1-231	ENST00000521941	WDR7	Q9Y4E6	1490 aa		13.62	□□□□□ -0.23
CTNNA1-231	ENST00000521941	EPRS	P07814	1512 aa	Known RBP	13.61	□□□□□ -0.23
CTNNA1-231	ENST00000521941	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.61	□□□□□ -0.23
CTNNA1-231	ENST00000521941	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.61	□□□□□ -0.23
CTNNA1-231	ENST00000521941	NUP153	P49790	1475 aa	Known RBP	13.61	□□□□□ -0.23
CTNNA1-231	ENST00000521941	ATP10B	O94823	1461 aa		13.6	□□□□□ -0.23
CTNNA1-231	ENST00000521941	GLI2	P10070	1586 aa		13.59	□□□□□ -0.23
CTNNA1-231	ENST00000521941	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.59	□□□□□ -0.23
CTNNA1-231	ENST00000521941	HECW1	Q76N89	1606 aa		13.57	□□□□□ -0.24
CTNNA1-231	ENST00000521941	PPRC1	Q5VV67	1664 aa	Known RBP	13.57	□□□□□ -0.24
CTNNA1-231	ENST00000521941	KCNH8	Q96L42	1107 aa		13.57	□□□□□ -0.24
CTNNA1-231	ENST00000521941	MAP3K4	Q9Y6R4	1608 aa		13.57	□□□□□ -0.24
CTNNA1-231	ENST00000521941	FMN1	Q68DA7	1419 aa		13.56	□□□□□ -0.24
CTNNA1-231	ENST00000521941	CDK13	Q14004	1512 aa	Known RBP	13.56	□□□□□ -0.24
CTNNA1-231	ENST00000521941	CLIP1	P30622	1438 aa		13.56	□□□□□ -0.24
CTNNA1-231	ENST00000521941	PCF11	O94913	1555 aa	Known RBP	13.55	□□□□□ -0.24
CTNNA1-231	ENST00000521941	KDM6B	O15054	1643 aa		13.54	□□□□□ -0.24
CTNNA1-231	ENST00000521941	CFAP43	Q8NDM7	1665 aa		13.53	□□□□□ -0.24
CTNNA1-231	ENST00000521941	LRRIQ1	Q96JM4	1722 aa		13.52	□□□□□ -0.25
CTNNA1-231	ENST00000521941	LOC105371045	A0A1W2PR82	267 aa		13.51	□□□□□ -0.25
CTNNA1-231	ENST00000521941	CEP162	Q5TB80	1403 aa		13.5	□□□□□ -0.25
CTNNA1-231	ENST00000521941	TEX14	Q8IWB6	1497 aa		13.49	□□□□□ -0.25
CTNNA1-231	ENST00000521941	CD109	Q6YHK3	1445 aa		13.49	□□□□□ -0.25
CTNNA1-231	ENST00000521941	ABCA9	Q8IUA7	1624 aa		13.49	□□□□□ -0.25
CTNNA1-231	ENST00000521941	PLEKHD1	A6NEE1	506 aa		13.47	□□□□□ -0.25
CTNNA1-231	ENST00000521941	FYCO1	Q9BQS8	1478 aa		13.45	□□□□□ -0.26
CTNNA1-231	ENST00000521941	CASKIN1	Q8WXD9	1431 aa		13.45	□□□□□ -0.26
CTNNA1-231	ENST00000521941	TTC37	Q6PGP7	1564 aa		13.45	□□□□□ -0.26
CTNNA1-231	ENST00000521941	MAGI3	Q5TCQ9	1506 aa		13.44	□□□□□ -0.26
CTNNA1-231	ENST00000521941	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.43	□□□□□ -0.26	6e-6	■■■■■ 38.2
CTNNA1-231	ENST00000521941	KIF14	Q15058	1648 aa		13.42	□□□□□ -0.26
CTNNA1-231	ENST00000521941	CCDC18	Q5T9S5	1454 aa		13.42	□□□□□ -0.26
CTNNA1-231	ENST00000521941	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.4	□□□□□ -0.26
CTNNA1-231	ENST00000521941	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.4	□□□□□ -0.26
CTNNA1-231	ENST00000521941	MYO5C	Q9NQX4	1742 aa		13.39	□□□□□ -0.27
CTNNA1-231	ENST00000521941	TRO	Q12816	1431 aa	Predicted RBP	13.39	□□□□□ -0.27
CTNNA1-231	ENST00000521941	CFAP74	Q9C0B2	1584 aa		13.37	□□□□□ -0.27
CTNNA1-231	ENST00000521941	FANCA	O15360	1455 aa		13.35	□□□□□ -0.27
CTNNA1-231	ENST00000521941	NEO1	Q92859	1461 aa		13.34	□□□□□ -0.27
CTNNA1-231	ENST00000521941	VPS8	Q8N3P4	1428 aa		13.32	□□□□□ -0.28
CTNNA1-231	ENST00000521941	ARHGAP5	Q13017	1502 aa		13.32	□□□□□ -0.28
CTNNA1-231	ENST00000521941	ARAP3	Q8WWN8	1544 aa		13.31	□□□□□ -0.28
CTNNA1-231	ENST00000521941	PREX2	Q70Z35	1606 aa		13.31	□□□□□ -0.28
CTNNA1-231	ENST00000521941	MTUS2	Q5JR59	1369 aa		13.31	□□□□□ -0.28
CTNNA1-231	ENST00000521941	AKNA	Q7Z591	1439 aa		13.3	□□□□□ -0.28
CTNNA1-231	ENST00000521941	FRMPD1	Q5SYB0	1578 aa		13.3	□□□□□ -0.28
CTNNA1-231	ENST00000521941	CDC42BPB	Q9Y5S2	1711 aa		13.3	□□□□□ -0.28
CTNNA1-231	ENST00000521941	PLCH2	O75038	1416 aa		13.3	□□□□□ -0.28
CTNNA1-231	ENST00000521941	EHBP1L1	Q8N3D4	1523 aa		13.29	□□□□□ -0.28
CTNNA1-231	ENST00000521941	RAPGEF3	O95398	923 aa		13.29	□□□□□ -0.28
CTNNA1-231	ENST00000521941	CDC42BPA	Q5VT25	1732 aa		13.29	□□□□□ -0.28
CTNNA1-231	ENST00000521941	PHLDB1	Q86UU1	1377 aa		13.29	□□□□□ -0.28
CTNNA1-231	ENST00000521941	ADGRL1	O94910	1474 aa		13.29	□□□□□ -0.28

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