RNA–Protein interactions for RNA: ENST00000521686.1

MSRA-207, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 3

Gene MSRA, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-207ENST00000521686 BAZ1AQ9NRL2 1556 aaPredicted RBP12.72□□□□□ -0.37
MSRA-207ENST00000521686 PROM2Q8N271 834 aa12.71□□□□□ -0.37
MSRA-207ENST00000521686 KIF21AQ7Z4S6 1674 aa12.68□□□□□ -0.38
MSRA-207ENST00000521686 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
MSRA-207ENST00000521686 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
MSRA-207ENST00000521686 RIMBP3CA6NJZ7 1639 aa12.66□□□□□ -0.38
MSRA-207ENST00000521686 RIMBP3BA6NNM3 1639 aa12.66□□□□□ -0.38
MSRA-207ENST00000521686 RIMBP3Q9UFD9 1639 aa12.66□□□□□ -0.38
MSRA-207ENST00000521686 CREBZFQ9NS37 354 aa12.66□□□□□ -0.38
MSRA-207ENST00000521686 C19orf67A6NJJ6 358 aa12.64□□□□□ -0.39
MSRA-207ENST00000521686 LAMC3Q9Y6N6 1575 aa12.64□□□□□ -0.39
MSRA-207ENST00000521686 FKBP8Q14318 412 aa12.63□□□□□ -0.39
MSRA-207ENST00000521686 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
MSRA-207ENST00000521686 PDS5BQ9NTI5 1447 aa12.61□□□□□ -0.39
MSRA-207ENST00000521686 WDR62O43379 1518 aa12.58□□□□□ -0.4
MSRA-207ENST00000521686 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.4
MSRA-207ENST00000521686 ARHGEF11O15085 1522 aa12.56□□□□□ -0.4
MSRA-207ENST00000521686 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
MSRA-207ENST00000521686 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
MSRA-207ENST00000521686 CYB5RLQ6IPT4 315 aa12.51□□□□□ -0.41
MSRA-207ENST00000521686 SMARCA4P51532 1647 aa12.49□□□□□ -0.41
MSRA-207ENST00000521686 MNX1P50219 401 aaPredicted RBP12.49□□□□□ -0.41
MSRA-207ENST00000521686 ILDR1Q86SU0 546 aaPredicted RBP12.46□□□□□ -0.41
MSRA-207ENST00000521686 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
MSRA-207ENST00000521686 ARAP1Q96P48 1450 aa12.41□□□□□ -0.42
MSRA-207ENST00000521686 GABBR2O75899 941 aa12.41□□□□□ -0.42
MSRA-207ENST00000521686 PEG3Q9GZU2 1588 aa12.38□□□□□ -0.43
MSRA-207ENST00000521686 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
MSRA-207ENST00000521686 CEP164Q9UPV0 1460 aa12.35□□□□□ -0.43
MSRA-207ENST00000521686 MIER1Q8N108 512 aa12.35□□□□□ -0.43
MSRA-207ENST00000521686 NPM1P06748 294 aaKnown RBP eCLIP12.33□□□□□ -0.44
MSRA-207ENST00000521686 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
MSRA-207ENST00000521686 ZNF579Q8NAF0 562 aaKnown RBP12.3□□□□□ -0.44
MSRA-207ENST00000521686 URB2Q14146 1524 aaKnown RBP12.29□□□□□ -0.44
MSRA-207ENST00000521686 ZNF608Q9ULD9 1512 aaPredicted RBP12.29□□□□□ -0.44
MSRA-207ENST00000521686 PHF12Q96QT6 1004 aa12.28□□□□□ -0.44
MSRA-207ENST00000521686 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.45
MSRA-207ENST00000521686 MROH2BQ7Z745 1585 aa12.23□□□□□ -0.45
MSRA-207ENST00000521686 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
MSRA-207ENST00000521686 TSPYL2Q9H2G4 693 aaPredicted RBP12.23□□□□□ -0.45
MSRA-207ENST00000521686 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
MSRA-207ENST00000521686 GALR2O43603 387 aaPredicted RBP12.21□□□□□ -0.45
MSRA-207ENST00000521686 POTEIP0CG38 1075 aa12.21□□□□□ -0.45
MSRA-207ENST00000521686 RASEFQ8IZ41 740 aa12.2□□□□□ -0.46
MSRA-207ENST00000521686 RSF1Q96T23 1441 aaPredicted RBP12.2□□□□□ -0.46
MSRA-207ENST00000521686 FBXO3Q9UK99 471 aa12.16□□□□□ -0.46
MSRA-207ENST00000521686 CFTRP13569 1480 aa12.14□□□□□ -0.47
MSRA-207ENST00000521686 IFT140Q96RY7 1462 aa12.14□□□□□ -0.47
MSRA-207ENST00000521686 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
MSRA-207ENST00000521686 CHD1O14646 1710 aa12.12□□□□□ -0.47
MSRA-207ENST00000521686 CLCN6P51797 869 aa12.12□□□□□ -0.47
MSRA-207ENST00000521686 NUBP1P53384 320 aa12.12□□□□□ -0.47
MSRA-207ENST00000521686 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
MSRA-207ENST00000521686 EIF4G3O43432 1585 aaKnown RBP12.1□□□□□ -0.47
MSRA-207ENST00000521686 MS4A3Q96HJ5 214 aa12.1□□□□□ -0.47
MSRA-207ENST00000521686 DCBLD2Q96PD2 775 aa12.08□□□□□ -0.48
MSRA-207ENST00000521686 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
MSRA-207ENST00000521686 KDM4FA0A1W2PPD8 638 aa12.05□□□□□ -0.48
MSRA-207ENST00000521686 AQRO60306 1485 aaKnown RBP eCLIP12.05□□□□□ -0.48
MSRA-207ENST00000521686 KIF12Q96FN5 646 aa12.04□□□□□ -0.48
MSRA-207ENST00000521686 CLASP1Q7Z460 1538 aa12.03□□□□□ -0.48
MSRA-207ENST00000521686 MAP3K13O43283 966 aa12.01□□□□□ -0.49
MSRA-207ENST00000521686 WIZO95785 1651 aa12□□□□□ -0.49
MSRA-207ENST00000521686 TRPC6Q9Y210 931 aa11.99□□□□□ -0.49
MSRA-207ENST00000521686 TOPBP1Q92547 1522 aa11.99□□□□□ -0.49
MSRA-207ENST00000521686 KLHL34Q8N239 644 aa11.98□□□□□ -0.49
MSRA-207ENST00000521686 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
MSRA-207ENST00000521686 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.49
MSRA-207ENST00000521686 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
MSRA-207ENST00000521686 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
MSRA-207ENST00000521686 TARBP1Q13395 1621 aaKnown RBP11.94□□□□□ -0.5
MSRA-207ENST00000521686 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
MSRA-207ENST00000521686 LHX8Q68G74 356 aa11.93□□□□□ -0.5
MSRA-207ENST00000521686 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
MSRA-207ENST00000521686 ASTLQ6HA08 431 aaPredicted RBP11.91□□□□□ -0.5
MSRA-207ENST00000521686 PYGBP11216 843 aa11.89□□□□□ -0.51
MSRA-207ENST00000521686 PCDHB13Q9Y5F0 798 aa11.89□□□□□ -0.51
MSRA-207ENST00000521686 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
MSRA-207ENST00000521686 ATN1P54259 1190 aaPredicted RBP11.88□□□□□ -0.51
MSRA-207ENST00000521686 BMP2KQ9NSY1 1161 aaPredicted RBP11.88□□□□□ -0.51
MSRA-207ENST00000521686 IFNL1Q8IU54 200 aa11.87□□□□□ -0.51
MSRA-207ENST00000521686 SYNJ1O43426 1573 aa11.87□□□□□ -0.51
MSRA-207ENST00000521686 TDRD9Q8NDG6 1382 aaKnown RBP11.86□□□□□ -0.51
MSRA-207ENST00000521686 ERCC6L2Q5T890 1561 aa11.84□□□□□ -0.51
MSRA-207ENST00000521686 KIF13AQ9H1H9 1805 aa11.84□□□□□ -0.51
MSRA-207ENST00000521686 POTEB2H3BUK9 544 aa11.84□□□□□ -0.51
MSRA-207ENST00000521686 CHMP7Q8WUX9 453 aaPredicted RBP11.84□□□□□ -0.51
MSRA-207ENST00000521686 DNMBPQ6XZF7 1577 aa11.84□□□□□ -0.51
MSRA-207ENST00000521686 POLA1P09884 1462 aaPredicted RBP11.83□□□□□ -0.52
MSRA-207ENST00000521686 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
MSRA-207ENST00000521686 ABCC8Q09428 1581 aa11.81□□□□□ -0.52
MSRA-207ENST00000521686 SPOCK2Q92563 424 aa11.81□□□□□ -0.52
MSRA-207ENST00000521686 SGIP1Q9BQI5 828 aa11.81□□□□□ -0.52
MSRA-207ENST00000521686 PRDM2Q13029 1718 aa11.8□□□□□ -0.52
MSRA-207ENST00000521686 TTLL13PA6NNM8 815 aa11.8□□□□□ -0.52
MSRA-207ENST00000521686 TIE1P35590 1138 aa11.8□□□□□ -0.52
MSRA-207ENST00000521686 FBXO41Q8TF61 875 aa11.8□□□□□ -0.52
MSRA-207ENST00000521686 METRNQ9UJH8 293 aa11.8□□□□□ -0.52
MSRA-207ENST00000521686 HECW2Q9P2P5 1572 aa11.79□□□□□ -0.52
MSRA-207ENST00000521686 TOP2AP11388 1531 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms