RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
CTNNA1-228ENST00000521640 WIZO95785 1651 aa11.27□□□□□ -0.6
CTNNA1-228ENST00000521640 PEG3Q9GZU2 1588 aa11.27□□□□□ -0.61
CTNNA1-228ENST00000521640 TOP2AP11388 1531 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-228ENST00000521640 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
CTNNA1-228ENST00000521640 HAX1O00165 279 aa11.18□□□□□ -0.62
CTNNA1-228ENST00000521640 PLEKHG5O94827 1062 aa11.18□□□□□ -0.62
CTNNA1-228ENST00000521640 EVX2Q03828 476 aa11.18□□□□□ -0.62
CTNNA1-228ENST00000521640 EIF4G1Q04637 1599 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-228ENST00000521640 C19orf67A6NJJ6 358 aa11.16□□□□□ -0.62
CTNNA1-228ENST00000521640 SMARCA2P51531 1590 aa11.13□□□□□ -0.63
CTNNA1-228ENST00000521640 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
CTNNA1-228ENST00000521640 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
CTNNA1-228ENST00000521640 CD44P16070 742 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-228ENST00000521640 NUBP1P53384 320 aa11.1□□□□□ -0.63
CTNNA1-228ENST00000521640 ZBTB47Q9UFB7 747 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-228ENST00000521640 RASEFQ8IZ41 740 aa11.09□□□□□ -0.63
CTNNA1-228ENST00000521640 ATAD2BQ9ULI0 1458 aa11.07□□□□□ -0.64
CTNNA1-228ENST00000521640 CCDC88BA6NC98 1476 aa11.06□□□□□ -0.64
CTNNA1-228ENST00000521640 HMGXB3Q12766 1538 aa11.04□□□□□ -0.64
CTNNA1-228ENST00000521640 TSPYL2Q9H2G4 693 aaPredicted RBP11.03□□□□□ -0.64
CTNNA1-228ENST00000521640 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
CTNNA1-228ENST00000521640 SPOCK2Q92563 424 aa11.02□□□□□ -0.65
CTNNA1-228ENST00000521640 BAZ1BQ9UIG0 1483 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-228ENST00000521640 NCAPD3P42695 1498 aa10.99□□□□□ -0.65
CTNNA1-228ENST00000521640 TRIM41Q8WV44 630 aa10.98□□□□□ -0.65
CTNNA1-228ENST00000521640 SP7Q8TDD2 431 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-228ENST00000521640 PAK3O75914 559 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-228ENST00000521640 PHF12Q96QT6 1004 aa10.96□□□□□ -0.65
CTNNA1-228ENST00000521640 CCDC61Q9Y6R9 512 aa10.96□□□□□ -0.65
CTNNA1-228ENST00000521640 ZNF579Q8NAF0 562 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-228ENST00000521640 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
CTNNA1-228ENST00000521640 FAM212AQ96EL1 285 aa10.94□□□□□ -0.66
CTNNA1-228ENST00000521640 EEA1Q15075 1411 aa10.89□□□□□ -0.67
CTNNA1-228ENST00000521640 GABBR2O75899 941 aa10.88□□□□□ -0.67
CTNNA1-228ENST00000521640 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-228ENST00000521640 GSE1Q14687 1217 aa10.86□□□□□ -0.67
CTNNA1-228ENST00000521640 KIF12Q96FN5 646 aa10.86□□□□□ -0.67
CTNNA1-228ENST00000521640 PYGBP11216 843 aa10.85□□□□□ -0.67
CTNNA1-228ENST00000521640 ABCC8Q09428 1581 aa10.84□□□□□ -0.67
CTNNA1-228ENST00000521640 MAP3K13O43283 966 aa10.83□□□□□ -0.68
CTNNA1-228ENST00000521640 GALR2O43603 387 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-228ENST00000521640 WRNQ14191 1432 aaPredicted RBP eCLIP10.83□□□□□ -0.68
CTNNA1-228ENST00000521640 MS4A3Q96HJ5 214 aa10.82□□□□□ -0.68
CTNNA1-228ENST00000521640 PRDM2Q13029 1718 aa10.81□□□□□ -0.68
CTNNA1-228ENST00000521640 BIVM-ERCC5R4GMW8 1640 aa10.78□□□□□ -0.68
CTNNA1-228ENST00000521640 PKD2Q13563 968 aa10.78□□□□□ -0.68
CTNNA1-228ENST00000521640 CFTRP13569 1480 aa10.78□□□□□ -0.68
CTNNA1-228ENST00000521640 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
CTNNA1-228ENST00000521640 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
CTNNA1-228ENST00000521640 CC2D2AQ9P2K1 1620 aa10.76□□□□□ -0.69
CTNNA1-228ENST00000521640 LOC105371045A0A1W2PR82 267 aa10.75□□□□□ -0.69
CTNNA1-228ENST00000521640 CHRM1P11229 460 aaPredicted RBP10.75□□□□□ -0.69
CTNNA1-228ENST00000521640 CLCN6P51797 869 aa10.75□□□□□ -0.69
CTNNA1-228ENST00000521640 IFNL1Q8IU54 200 aa10.75□□□□□ -0.69
CTNNA1-228ENST00000521640 TRPC6Q9Y210 931 aa10.75□□□□□ -0.69
CTNNA1-228ENST00000521640 PCDHB13Q9Y5F0 798 aa10.75□□□□□ -0.69
CTNNA1-228ENST00000521640 PCDHB8Q9UN66 801 aa10.72□□□□□ -0.69
CTNNA1-228ENST00000521640 POTEIP0CG38 1075 aa10.71□□□□□ -0.69
CTNNA1-228ENST00000521640 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
CTNNA1-228ENST00000521640 KIF21BO75037 1637 aa10.7□□□□□ -0.7
CTNNA1-228ENST00000521640 RNF25Q96BH1 459 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-228ENST00000521640 ECM2O94769 699 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-228ENST00000521640 SOGA1O94964 1423 aa10.67□□□□□ -0.7
CTNNA1-228ENST00000521640 GOLGA3Q08378 1498 aa10.67□□□□□ -0.7
CTNNA1-228ENST00000521640 TNIKQ9UKE5 1360 aa10.66□□□□□ -0.7
CTNNA1-228ENST00000521640 CADPSQ9ULU8 1353 aa10.66□□□□□ -0.7
CTNNA1-228ENST00000521640 CEP164Q9UPV0 1460 aa10.66□□□□□ -0.7
CTNNA1-228ENST00000521640 ZNF467Q7Z7K2 595 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-228ENST00000521640 FAM9AQ8IZU1 332 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-228ENST00000521640 DCBLD2Q96PD2 775 aa10.64□□□□□ -0.71
CTNNA1-228ENST00000521640 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-228ENST00000521640 CUX1P39880 1505 aa10.63□□□□□ -0.71
CTNNA1-228ENST00000521640 RGL2O15211 777 aa10.63□□□□□ -0.71
CTNNA1-228ENST00000521640 RTN4Q9NQC3 1192 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-228ENST00000521640 ATMINO43313 823 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-228ENST00000521640 PELP1Q8IZL8 1130 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-228ENST00000521640 ERICH3Q5RHP9 1530 aa10.61□□□□□ -0.71
CTNNA1-228ENST00000521640 LAMC3Q9Y6N6 1575 aa10.6□□□□□ -0.71
CTNNA1-228ENST00000521640 TIE1P35590 1138 aa10.6□□□□□ -0.71
CTNNA1-228ENST00000521640 ASTLQ6HA08 431 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-228ENST00000521640 RUSC2Q8N2Y8 1516 aa10.59□□□□□ -0.71
CTNNA1-228ENST00000521640 TTLL13PA6NNM8 815 aa10.59□□□□□ -0.71
CTNNA1-228ENST00000521640 RIOK3O14730 519 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-228ENST00000521640 ATN1P54259 1190 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-228ENST00000521640 TMEM106CQ9BVX2 250 aa10.58□□□□□ -0.72
CTNNA1-228ENST00000521640 CEP162Q5TB80 1403 aa10.58□□□□□ -0.72
CTNNA1-228ENST00000521640 PSEN1P49768 467 aa10.57□□□□□ -0.72
CTNNA1-228ENST00000521640 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-228ENST00000521640 AMER1Q5JTC6 1135 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-228ENST00000521640 PDAP1Q13442 181 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-228ENST00000521640 KIF27Q86VH2 1401 aa10.56□□□□□ -0.72
CTNNA1-228ENST00000521640 PRXQ9BXM0 1461 aa10.55□□□□□ -0.72
CTNNA1-228ENST00000521640 DNMBPQ6XZF7 1577 aa10.54□□□□□ -0.72
CTNNA1-228ENST00000521640 FANCD2Q9BXW9 1451 aa10.54□□□□□ -0.72
CTNNA1-228ENST00000521640 TRIM35Q9UPQ4 493 aa10.52□□□□□ -0.73
CTNNA1-228ENST00000521640 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-228ENST00000521640 VGFO15240 615 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-228ENST00000521640 ZFP91Q96JP5 570 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-228ENST00000521640 PCGF6Q9BYE7 350 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms