RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
NEFM-205ENST00000521540 ADAMTS12P58397 1594 aa20.09■□□□□ 0.81
NEFM-205ENST00000521540 IGF1RP08069 1367 aa20.09■□□□□ 0.81
NEFM-205ENST00000521540 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
NEFM-205ENST00000521540 CUL7Q14999 1698 aa20.06■□□□□ 0.8
NEFM-205ENST00000521540 SYNJ2O15056 1496 aa20.04■□□□□ 0.8
NEFM-205ENST00000521540 FHAD1B1AJZ9 1412 aa20.04■□□□□ 0.8
NEFM-205ENST00000521540 CHD1O14646 1710 aa20.02■□□□□ 0.8
NEFM-205ENST00000521540 CARMIL1Q5VZK9 1371 aa19.99■□□□□ 0.79
NEFM-205ENST00000521540 GRIN2AQ12879 1464 aa19.96■□□□□ 0.79
NEFM-205ENST00000521540 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
NEFM-205ENST00000521540 RANGAP1P46060 587 aaPredicted RBP19.94■□□□□ 0.78
NEFM-205ENST00000521540 FBLN2P98095 1184 aa19.93■□□□□ 0.78
NEFM-205ENST00000521540 ARHGAP35Q9NRY4 1499 aa19.93■□□□□ 0.78
NEFM-205ENST00000521540 HNRNPUL2Q1KMD3 747 aaKnown RBP19.9■□□□□ 0.78
NEFM-205ENST00000521540 MAP3K1Q13233 1512 aa19.88■□□□□ 0.77
NEFM-205ENST00000521540 NUP160Q12769 1436 aa19.86■□□□□ 0.77
NEFM-205ENST00000521540 CEP170Q5SW79 1584 aa19.86■□□□□ 0.77
NEFM-205ENST00000521540 RRBP1Q9P2E9 1410 aaKnown RBP19.85■□□□□ 0.77
NEFM-205ENST00000521540 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
NEFM-205ENST00000521540 CLSPNQ9HAW4 1339 aa19.83■□□□□ 0.77
NEFM-205ENST00000521540 DIEXFQ68CQ4 756 aaKnown RBP19.82■□□□□ 0.76
NEFM-205ENST00000521540 CLASP1Q7Z460 1538 aa19.81■□□□□ 0.76
NEFM-205ENST00000521540 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
NEFM-205ENST00000521540 KANK4Q5T7N3 995 aaPredicted RBP19.79■□□□□ 0.76
NEFM-205ENST00000521540 CTTNBP2Q8WZ74 1663 aa19.78■□□□□ 0.76
NEFM-205ENST00000521540 TIAM1Q13009 1591 aa19.76■□□□□ 0.75
NEFM-205ENST00000521540 KIAA0586Q9BVV6 1533 aa19.75■□□□□ 0.75
NEFM-205ENST00000521540 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
NEFM-205ENST00000521540 DNAJC5Q9H3Z4 198 aa19.72■□□□□ 0.75
NEFM-205ENST00000521540 CCNB3Q8WWL7 1395 aa19.72■□□□□ 0.75
NEFM-205ENST00000521540 IQGAP2Q13576 1575 aa19.7■□□□□ 0.74
NEFM-205ENST00000521540 SHROOM2Q13796 1616 aa19.69■□□□□ 0.74
NEFM-205ENST00000521540 CFAP43Q8NDM7 1665 aa19.68■□□□□ 0.74
NEFM-205ENST00000521540 DHX57Q6P158 1386 aaKnown RBP19.66■□□□□ 0.74
NEFM-205ENST00000521540 LRRC9Q6ZRR7 1453 aa19.65■□□□□ 0.74
NEFM-205ENST00000521540 FYCO1Q9BQS8 1478 aa19.61■□□□□ 0.73
NEFM-205ENST00000521540 UGGT2Q9NYU1 1516 aa19.61■□□□□ 0.73
NEFM-205ENST00000521540 JPH4Q96JJ6 628 aa19.6■□□□□ 0.73
NEFM-205ENST00000521540 PCF11O94913 1555 aaKnown RBP19.6■□□□□ 0.73
NEFM-205ENST00000521540 CENPBP07199 599 aaPredicted RBP19.58■□□□□ 0.73
NEFM-205ENST00000521540 ARHGEF11O15085 1522 aa19.58■□□□□ 0.72
NEFM-205ENST00000521540 CASKIN1Q8WXD9 1431 aa19.57■□□□□ 0.72
NEFM-205ENST00000521540 PRG4Q92954 1404 aaPredicted RBP19.57■□□□□ 0.72
NEFM-205ENST00000521540 ERCC6L2Q5T890 1561 aa19.56■□□□□ 0.72
NEFM-205ENST00000521540 ACIN1Q9UKV3 1341 aaKnown RBP19.56■□□□□ 0.72
NEFM-205ENST00000521540 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
NEFM-205ENST00000521540 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
NEFM-205ENST00000521540 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
NEFM-205ENST00000521540 FMN1Q68DA7 1419 aa19.54■□□□□ 0.72
NEFM-205ENST00000521540 SAMD9Q5K651 1589 aa19.54■□□□□ 0.72
NEFM-205ENST00000521540 DISP1Q96F81 1524 aa19.53■□□□□ 0.72
NEFM-205ENST00000521540 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
NEFM-205ENST00000521540 FHOD3Q2V2M9 1422 aa19.52■□□□□ 0.72
NEFM-205ENST00000521540 KIAA0556O60303 1618 aa19.52■□□□□ 0.71
NEFM-205ENST00000521540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.5■□□□□ 0.71
NEFM-205ENST00000521540 CARMIL2Q6F5E8 1435 aa19.5■□□□□ 0.71
NEFM-205ENST00000521540 P3H3Q8IVL6 736 aa19.49■□□□□ 0.71
NEFM-205ENST00000521540 PHLDB1Q86UU1 1377 aa19.48■□□□□ 0.71
NEFM-205ENST00000521540 SETD5Q9C0A6 1442 aa19.47■□□□□ 0.71
NEFM-205ENST00000521540 RAB3GAP2Q9H2M9 1393 aa19.45■□□□□ 0.7
NEFM-205ENST00000521540 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
NEFM-205ENST00000521540 ITGAEP38570 1179 aa19.4■□□□□ 0.7
NEFM-205ENST00000521540 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
NEFM-205ENST00000521540 PTPRGP23470 1445 aa19.37■□□□□ 0.69
NEFM-205ENST00000521540 FAM50AQ14320 339 aaKnown RBP19.35■□□□□ 0.69
NEFM-205ENST00000521540 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
NEFM-205ENST00000521540 CYB5RLQ6IPT4 315 aa19.35■□□□□ 0.69
NEFM-205ENST00000521540 MIER1Q8N108 512 aa19.34■□□□□ 0.69
NEFM-205ENST00000521540 FGD6Q6ZV73 1430 aa19.32■□□□□ 0.68
NEFM-205ENST00000521540 MTUS2Q5JR59 1369 aa19.32■□□□□ 0.68
NEFM-205ENST00000521540 EHBP1L1Q8N3D4 1523 aa19.31■□□□□ 0.68
NEFM-205ENST00000521540 TIMELESSQ9UNS1 1208 aa19.31■□□□□ 0.68
NEFM-205ENST00000521540 SUPT6HQ7KZ85 1726 aaKnown RBP19.31■□□□□ 0.68
NEFM-205ENST00000521540 LRRIQ1Q96JM4 1722 aa19.31■□□□□ 0.68
NEFM-205ENST00000521540 CCDC18Q5T9S5 1454 aa19.3■□□□□ 0.68
NEFM-205ENST00000521540 ABCA8O94911 1581 aa19.28■□□□□ 0.68
NEFM-205ENST00000521540 PLB1Q6P1J6 1458 aa19.27■□□□□ 0.68
NEFM-205ENST00000521540 UACAQ9BZF9 1416 aa19.26■□□□□ 0.67
NEFM-205ENST00000521540 ADCY10Q96PN6 1610 aa19.26■□□□□ 0.67
NEFM-205ENST00000521540 HECW1Q76N89 1606 aa19.26■□□□□ 0.67
NEFM-205ENST00000521540 UHRF1BP1LA0JNW5 1464 aa19.25■□□□□ 0.67
NEFM-205ENST00000521540 ABCC2Q92887 1545 aa19.25■□□□□ 0.67
NEFM-205ENST00000521540 MYOM3Q5VTT5 1437 aa19.24■□□□□ 0.67
NEFM-205ENST00000521540 PELP1Q8IZL8 1130 aaKnown RBP19.24■□□□□ 0.67
NEFM-205ENST00000521540 RAPGEF6Q8TEU7 1601 aa19.24■□□□□ 0.67
NEFM-205ENST00000521540 NCOA2Q15596 1464 aa19.24■□□□□ 0.67
NEFM-205ENST00000521540 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
NEFM-205ENST00000521540 HFM1A2PYH4 1435 aa19.2■□□□□ 0.66
NEFM-205ENST00000521540 NUP153P49790 1475 aaKnown RBP19.17■□□□□ 0.66
NEFM-205ENST00000521540 PTPN23Q9H3S7 1636 aa19.16■□□□□ 0.66
NEFM-205ENST00000521540 KDM5BQ9UGL1 1544 aa19.16■□□□□ 0.66
NEFM-205ENST00000521540 TCOF1Q13428 1488 aaKnown RBP19.15■□□□□ 0.66
NEFM-205ENST00000521540 YTHDC1Q96MU7 727 aaKnown RBP19.14■□□□□ 0.65
NEFM-205ENST00000521540 ZCCHC11Q5TAX3 1644 aaKnown RBP19.13■□□□□ 0.65
NEFM-205ENST00000521540 EPRSP07814 1512 aaKnown RBP19.13■□□□□ 0.65
NEFM-205ENST00000521540 MAGI3Q5TCQ9 1506 aa19.11■□□□□ 0.65
NEFM-205ENST00000521540 MIA2Q96PC5 1412 aa19.1■□□□□ 0.65
NEFM-205ENST00000521540 ATP10BO94823 1461 aa19.1■□□□□ 0.65
NEFM-205ENST00000521540 NAIPQ13075 1403 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms