RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 RUSC2Q8N2Y8 1516 aa37.01■■■■□ 3.52
HOXA3-204ENST00000521401 PRG4Q92954 1404 aaPredicted RBP36.99■■■■□ 3.51
HOXA3-204ENST00000521401 KIAA0586Q9BVV6 1533 aa36.93■■■■□ 3.5
HOXA3-204ENST00000521401 TRHP20396 242 aaPredicted RBP36.91■■■■□ 3.5
HOXA3-204ENST00000521401 RAPGEF2Q9Y4G8 1499 aa36.71■■■■□ 3.47
HOXA3-204ENST00000521401 IQGAP2Q13576 1575 aa36.58■■■■□ 3.45
HOXA3-204ENST00000521401 PRXQ9BXM0 1461 aa36.52■■■■□ 3.44
HOXA3-204ENST00000521401 CARMIL2Q6F5E8 1435 aa36.51■■■■□ 3.43
HOXA3-204ENST00000521401 PTPRGP23470 1445 aa36.49■■■■□ 3.43
HOXA3-204ENST00000521401 TNIKQ9UKE5 1360 aa36.48■■■■□ 3.43
HOXA3-204ENST00000521401 DISP1Q96F81 1524 aa36.46■■■■□ 3.43
HOXA3-204ENST00000521401 ADCY10Q96PN6 1610 aa36.45■■■■□ 3.43
HOXA3-204ENST00000521401 UGGT2Q9NYU1 1516 aa36.44■■■■□ 3.42
HOXA3-204ENST00000521401 NPM1P06748 294 aaKnown RBP eCLIP36.4■■■■□ 3.42
HOXA3-204ENST00000521401 TTBK1Q5TCY1 1321 aaPredicted RBP36.38■■■■□ 3.41
HOXA3-204ENST00000521401 CSRNP3Q8WYN3 585 aa36.37■■■■□ 3.41
HOXA3-204ENST00000521401 MAPKBP1O60336 1514 aa36.33■■■■□ 3.41
HOXA3-204ENST00000521401 KIAA0556O60303 1618 aa36.26■■■■□ 3.4
HOXA3-204ENST00000521401 ABCC10Q5T3U5 1492 aa36.26■■■■□ 3.4
HOXA3-204ENST00000521401 EEA1Q15075 1411 aa36.25■■■■□ 3.39
HOXA3-204ENST00000521401 CTTNBP2Q8WZ74 1663 aa36.24■■■■□ 3.39
HOXA3-204ENST00000521401 UACAQ9BZF9 1416 aa36.24■■■■□ 3.39
HOXA3-204ENST00000521401 UHRF1BP1LA0JNW5 1464 aa36.23■■■■□ 3.39
HOXA3-204ENST00000521401 FAM69CQ0P6D2 419 aa36.21■■■■□ 3.39
HOXA3-204ENST00000521401 ABCC2Q92887 1545 aa36.21■■■■□ 3.39
HOXA3-204ENST00000521401 KIF13AQ9H1H9 1805 aa36.2■■■■□ 3.38
HOXA3-204ENST00000521401 CHIC1Q5VXU3 224 aa36.19■■■■□ 3.38
HOXA3-204ENST00000521401 GOLGA3Q08378 1498 aa36.14■■■■□ 3.38
HOXA3-204ENST00000521401 DIP2BQ9P265 1576 aa36.13■■■■□ 3.37
HOXA3-204ENST00000521401 FAM9AQ8IZU1 332 aaPredicted RBP36.12■■■■□ 3.37
HOXA3-204ENST00000521401 KDM5BQ9UGL1 1544 aa36.06■■■■□ 3.36
HOXA3-204ENST00000521401 ASXL2Q76L83 1435 aa36.04■■■■□ 3.36
HOXA3-204ENST00000521401 PLB1Q6P1J6 1458 aa36.02■■■■□ 3.36
HOXA3-204ENST00000521401 ABCA8O94911 1581 aa35.94■■■■□ 3.34
HOXA3-204ENST00000521401 P3H3Q8IVL6 736 aa35.94■■■■□ 3.34
HOXA3-204ENST00000521401 ZCCHC11Q5TAX3 1644 aaKnown RBP35.9■■■■□ 3.34
HOXA3-204ENST00000521401 KIF21BO75037 1637 aa35.89■■■■□ 3.34
HOXA3-204ENST00000521401 SAMD9Q5K651 1589 aa35.87■■■■□ 3.33
HOXA3-204ENST00000521401 GLI2P10070 1586 aa35.86■■■■□ 3.33
HOXA3-204ENST00000521401 EPRSP07814 1512 aaKnown RBP35.83■■■■□ 3.33
HOXA3-204ENST00000521401 RANGAP1P46060 587 aaPredicted RBP35.77■■■■□ 3.32
HOXA3-204ENST00000521401 WDR7Q9Y4E6 1490 aa35.76■■■■□ 3.32
HOXA3-204ENST00000521401 TSPOAP1O95153 1857 aa35.73■■■■□ 3.31
HOXA3-204ENST00000521401 FHOD3Q2V2M9 1422 aa35.69■■■■□ 3.3
HOXA3-204ENST00000521401 ATP10BO94823 1461 aa35.68■■■■□ 3.3
HOXA3-204ENST00000521401 EHMT2Q96KQ7 1210 aa35.68■■■■□ 3.3
HOXA3-204ENST00000521401 PPRC1Q5VV67 1664 aaKnown RBP35.68■■■■□ 3.3
HOXA3-204ENST00000521401 ARID3CA6NKF2 412 aa35.66■■■■□ 3.3
HOXA3-204ENST00000521401 UBTFP17480 764 aaKnown RBP35.64■■■■□ 3.3
HOXA3-204ENST00000521401 KDM6BO15054 1643 aa35.64■■■■□ 3.3
HOXA3-204ENST00000521401 MAP3K4Q9Y6R4 1608 aa35.64■■■■□ 3.3
HOXA3-204ENST00000521401 KCNH8Q96L42 1107 aa35.6■■■■□ 3.29
HOXA3-204ENST00000521401 EFCAB5A4FU69 1503 aa35.6■■■■□ 3.29
HOXA3-204ENST00000521401 RAPGEF6Q8TEU7 1601 aa35.59■■■■□ 3.29
HOXA3-204ENST00000521401 NUP153P49790 1475 aaKnown RBP35.54■■■■□ 3.28
HOXA3-204ENST00000521401 TEX14Q8IWB6 1497 aa35.51■■■■□ 3.28
HOXA3-204ENST00000521401 COL17A1Q9UMD9 1497 aaPredicted RBP35.51■■■■□ 3.28
HOXA3-204ENST00000521401 CD109Q6YHK3 1445 aa35.5■■■■□ 3.27
HOXA3-204ENST00000521401 MAGI3Q5TCQ9 1506 aa35.46■■■■□ 3.27
HOXA3-204ENST00000521401 ARHGAP35Q9NRY4 1499 aa35.44■■■■□ 3.26
HOXA3-204ENST00000521401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.42■■■■□ 3.26
HOXA3-204ENST00000521401 HNRNPUL2Q1KMD3 747 aaKnown RBP35.42■■■■□ 3.26
HOXA3-204ENST00000521401 CFAP43Q8NDM7 1665 aa35.42■■■■□ 3.26
HOXA3-204ENST00000521401 AEBP2Q6ZN18 517 aaPredicted RBP35.36■■■■□ 3.25
HOXA3-204ENST00000521401 ABCA9Q8IUA7 1624 aa35.3■■■■□ 3.24
HOXA3-204ENST00000521401 FMN1Q68DA7 1419 aa35.3■■■■□ 3.24
HOXA3-204ENST00000521401 PLEKHD1A6NEE1 506 aa35.29■■■■□ 3.24
HOXA3-204ENST00000521401 CDK13Q14004 1512 aaKnown RBP35.22■■■■□ 3.23
HOXA3-204ENST00000521401 KDM4FA0A1W2PPD8 638 aa35.2■■■■□ 3.23
HOXA3-204ENST00000521401 ATP1B4Q9UN42 357 aaPredicted RBP35.16■■■■□ 3.22
HOXA3-204ENST00000521401 ARAP3Q8WWN8 1544 aa35.16■■■■□ 3.22
HOXA3-204ENST00000521401 PHLDB1Q86UU1 1377 aa35.14■■■■□ 3.22
HOXA3-204ENST00000521401 HECW1Q76N89 1606 aa35.13■■■■□ 3.21
HOXA3-204ENST00000521401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.1■■■■□ 3.21
HOXA3-204ENST00000521401 NEO1Q92859 1461 aa35.09■■■■□ 3.21
HOXA3-204ENST00000521401 CLIP1P30622 1438 aa35.03■■■■□ 3.2
HOXA3-204ENST00000521401 TTC37Q6PGP7 1564 aa35.01■■■■□ 3.2
HOXA3-204ENST00000521401 CASKIN1Q8WXD9 1431 aa35.01■■■■□ 3.2
HOXA3-204ENST00000521401 RAPGEF3O95398 923 aa35■■■■□ 3.19
HOXA3-204ENST00000521401 CDK11AQ9UQ88 783 aaPredicted RBP35■■■■□ 3.19
HOXA3-204ENST00000521401 ADGRL1O94910 1474 aa34.97■■■■□ 3.19
HOXA3-204ENST00000521401 TROQ12816 1431 aaPredicted RBP34.95■■■■□ 3.19
HOXA3-204ENST00000521401 PCF11O94913 1555 aaKnown RBP34.95■■■■□ 3.18
HOXA3-204ENST00000521401 AKNAQ7Z591 1439 aa34.94■■■■□ 3.18
HOXA3-204ENST00000521401 FANCAO15360 1455 aa34.94■■■■□ 3.18
HOXA3-204ENST00000521401 LRRIQ1Q96JM4 1722 aa34.92■■■■□ 3.18
HOXA3-204ENST00000521401 PLCH2O75038 1416 aa34.91■■■■□ 3.18
HOXA3-204ENST00000521401 FRMPD1Q5SYB0 1578 aa34.89■■■■□ 3.18
HOXA3-204ENST00000521401 DENND4BO75064 1496 aaPredicted RBP34.86■■■■□ 3.17
HOXA3-204ENST00000521401 CCDC18Q5T9S5 1454 aa34.86■■■■□ 3.17
HOXA3-204ENST00000521401 FYCO1Q9BQS8 1478 aa34.85■■■■□ 3.17
HOXA3-204ENST00000521401 KIF14Q15058 1648 aa34.85■■■■□ 3.17
HOXA3-204ENST00000521401 CFAP74Q9C0B2 1584 aa34.83■■■■□ 3.17
HOXA3-204ENST00000521401 EFCAB2Q5VUJ9 269 aa34.77■■■■□ 3.16
HOXA3-204ENST00000521401 CEP162Q5TB80 1403 aa34.77■■■■□ 3.16
HOXA3-204ENST00000521401 RICTORQ6R327 1708 aa34.74■■■■□ 3.15
HOXA3-204ENST00000521401 SCAPERQ9BY12 1400 aa34.73■■■■□ 3.15
HOXA3-204ENST00000521401 LOC105371045A0A1W2PR82 267 aa34.73■■■■□ 3.15
HOXA3-204ENST00000521401 MYO5CQ9NQX4 1742 aa34.7■■■■□ 3.15
HOXA3-204ENST00000521401 ZMYM4Q5VZL5 1548 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms