RNA–Protein interactions for RNA: ENST00000521118.5

CDKL3-206, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKL3, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-206ENST00000521118 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.14
CDKL3-206ENST00000521118 FHOD3Q2V2M9 1422 aa22.2■■□□□ 1.14
CDKL3-206ENST00000521118 GAPVD1Q14C86 1478 aa22.19■■□□□ 1.14
CDKL3-206ENST00000521118 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
CDKL3-206ENST00000521118 CFAP43Q8NDM7 1665 aa22.12■■□□□ 1.13
CDKL3-206ENST00000521118 LRRC9Q6ZRR7 1453 aa22.12■■□□□ 1.13
CDKL3-206ENST00000521118 EFCAB5A4FU69 1503 aa22.11■■□□□ 1.13
CDKL3-206ENST00000521118 CCNB3Q8WWL7 1395 aa22.11■■□□□ 1.13
CDKL3-206ENST00000521118 FHAD1B1AJZ9 1412 aa22.1■■□□□ 1.13
CDKL3-206ENST00000521118 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
CDKL3-206ENST00000521118 PHLDB1Q86UU1 1377 aa22.05■■□□□ 1.12
CDKL3-206ENST00000521118 PBRM1Q86U86 1689 aa22.05■■□□□ 1.12
CDKL3-206ENST00000521118 DHX57Q6P158 1386 aaKnown RBP22.04■■□□□ 1.12
CDKL3-206ENST00000521118 AQRO60306 1485 aaKnown RBP eCLIP22.04■■□□□ 1.12
CDKL3-206ENST00000521118 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
CDKL3-206ENST00000521118 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
CDKL3-206ENST00000521118 SAMD9Q5K651 1589 aa22.03■■□□□ 1.12
CDKL3-206ENST00000521118 CASKIN1Q8WXD9 1431 aa22.02■■□□□ 1.12
CDKL3-206ENST00000521118 ITGAEP38570 1179 aa22.01■■□□□ 1.11
CDKL3-206ENST00000521118 SNAPC4Q5SXM2 1469 aa22■■□□□ 1.11
CDKL3-206ENST00000521118 LRRIQ1Q96JM4 1722 aa21.98■■□□□ 1.11
CDKL3-206ENST00000521118 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
CDKL3-206ENST00000521118 ADAMTS12P58397 1594 aa21.95■■□□□ 1.1
CDKL3-206ENST00000521118 DIEXFQ68CQ4 756 aaKnown RBP21.94■■□□□ 1.1
CDKL3-206ENST00000521118 FMN1Q68DA7 1419 aa21.93■■□□□ 1.1
CDKL3-206ENST00000521118 WDR62O43379 1518 aa21.93■■□□□ 1.1
CDKL3-206ENST00000521118 ZNF316A6NFI3 1004 aaPredicted RBP21.91■■□□□ 1.1
CDKL3-206ENST00000521118 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
CDKL3-206ENST00000521118 RAB3GAP2Q9H2M9 1393 aa21.86■■□□□ 1.09
CDKL3-206ENST00000521118 IFT140Q96RY7 1462 aa21.86■■□□□ 1.09
CDKL3-206ENST00000521118 FAM50AQ14320 339 aaKnown RBP21.86■■□□□ 1.09
CDKL3-206ENST00000521118 CLSPNQ9HAW4 1339 aa21.83■■□□□ 1.09
CDKL3-206ENST00000521118 IQGAP2Q13576 1575 aa21.83■■□□□ 1.09
CDKL3-206ENST00000521118 EIF4G3O43432 1585 aaKnown RBP21.79■■□□□ 1.08
CDKL3-206ENST00000521118 THOC2Q8NI27 1593 aaKnown RBP21.79■■□□□ 1.08
CDKL3-206ENST00000521118 MAPKBP1O60336 1514 aa21.78■■□□□ 1.08
CDKL3-206ENST00000521118 MAGI3Q5TCQ9 1506 aa21.78■■□□□ 1.08
CDKL3-206ENST00000521118 SETD5Q9C0A6 1442 aa21.78■■□□□ 1.08
CDKL3-206ENST00000521118 ERCC6Q03468 1493 aa21.77■■□□□ 1.08
CDKL3-206ENST00000521118 MTUS2Q5JR59 1369 aa21.76■■□□□ 1.07
CDKL3-206ENST00000521118 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
CDKL3-206ENST00000521118 NCOA2Q15596 1464 aa21.72■■□□□ 1.07
CDKL3-206ENST00000521118 UGGT2Q9NYU1 1516 aa21.7■■□□□ 1.06
CDKL3-206ENST00000521118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.69■■□□□ 1.06
CDKL3-206ENST00000521118 PTPRKQ15262 1439 aa21.69■■□□□ 1.06
CDKL3-206ENST00000521118 EHBP1L1Q8N3D4 1523 aa21.69■■□□□ 1.06
CDKL3-206ENST00000521118 SUPT6HQ7KZ85 1726 aaKnown RBP21.68■■□□□ 1.06
CDKL3-206ENST00000521118 HECW1Q76N89 1606 aa21.67■■□□□ 1.06
CDKL3-206ENST00000521118 CDK13Q14004 1512 aaKnown RBP21.67■■□□□ 1.06
CDKL3-206ENST00000521118 GRIN2AQ12879 1464 aa21.67■■□□□ 1.06
CDKL3-206ENST00000521118 ARHGEF11O15085 1522 aa21.66■■□□□ 1.06
CDKL3-206ENST00000521118 DISP1Q96F81 1524 aa21.65■■□□□ 1.06
CDKL3-206ENST00000521118 MYOM3Q5VTT5 1437 aa21.65■■□□□ 1.06
CDKL3-206ENST00000521118 EPRSP07814 1512 aaKnown RBP21.64■■□□□ 1.06
CDKL3-206ENST00000521118 KIAA0586Q9BVV6 1533 aa21.64■■□□□ 1.05
CDKL3-206ENST00000521118 CCDC18Q5T9S5 1454 aa21.64■■□□□ 1.05
CDKL3-206ENST00000521118 ARID3CA6NKF2 412 aa21.64■■□□□ 1.05
CDKL3-206ENST00000521118 KIAA0556O60303 1618 aa21.63■■□□□ 1.05
CDKL3-206ENST00000521118 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
CDKL3-206ENST00000521118 CEP170Q5SW79 1584 aa21.59■■□□□ 1.05
CDKL3-206ENST00000521118 MIER1Q8N108 512 aa21.59■■□□□ 1.05
CDKL3-206ENST00000521118 PTPN23Q9H3S7 1636 aa21.59■■□□□ 1.05
CDKL3-206ENST00000521118 SIN3AQ96ST3 1273 aa21.57■■□□□ 1.04
CDKL3-206ENST00000521118 MAGI1Q96QZ7 1491 aaPredicted RBP21.57■■□□□ 1.04
CDKL3-206ENST00000521118 NEUROD1Q13562 356 aa21.55■■□□□ 1.04
CDKL3-206ENST00000521118 SYNJ2O15056 1496 aa21.54■■□□□ 1.04
CDKL3-206ENST00000521118 HFM1A2PYH4 1435 aa21.52■■□□□ 1.04
CDKL3-206ENST00000521118 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.03
CDKL3-206ENST00000521118 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
CDKL3-206ENST00000521118 TCOF1Q13428 1488 aaKnown RBP21.5■■□□□ 1.03
CDKL3-206ENST00000521118 NAIPQ13075 1403 aa21.5■■□□□ 1.03
CDKL3-206ENST00000521118 RAPGEF6Q8TEU7 1601 aa21.49■■□□□ 1.03
CDKL3-206ENST00000521118 ACIN1Q9UKV3 1341 aaKnown RBP21.49■■□□□ 1.03
CDKL3-206ENST00000521118 FBLN2P98095 1184 aa21.48■■□□□ 1.03
CDKL3-206ENST00000521118 NUP160Q12769 1436 aa21.44■■□□□ 1.02
CDKL3-206ENST00000521118 CHIC2Q9UKJ5 165 aa21.42■■□□□ 1.02
CDKL3-206ENST00000521118 KDM6BO15054 1643 aa21.42■■□□□ 1.02
CDKL3-206ENST00000521118 PLB1Q6P1J6 1458 aa21.42■■□□□ 1.02
CDKL3-206ENST00000521118 UACAQ9BZF9 1416 aa21.4■■□□□ 1.02
CDKL3-206ENST00000521118 RRP7BPQ9NSQ0 103 aa21.4■■□□□ 1.02
CDKL3-206ENST00000521118 YTHDC1Q96MU7 727 aaKnown RBP21.4■■□□□ 1.02
CDKL3-206ENST00000521118 GCC2Q8IWJ2 1684 aa21.38■■□□□ 1.01
CDKL3-206ENST00000521118 MIA2Q96PC5 1412 aa21.38■■□□□ 1.01
CDKL3-206ENST00000521118 JPH4Q96JJ6 628 aa21.36■■□□□ 1.01
CDKL3-206ENST00000521118 PRG4Q92954 1404 aaPredicted RBP21.36■■□□□ 1.01
CDKL3-206ENST00000521118 ZNF644Q9H582 1327 aaPredicted RBP21.34■■□□□ 1.01
CDKL3-206ENST00000521118 DENND4BO75064 1496 aaPredicted RBP21.33■■□□□ 1.01
CDKL3-206ENST00000521118 CENPBP07199 599 aaPredicted RBP21.33■■□□□ 1
CDKL3-206ENST00000521118 KIF14Q15058 1648 aa21.31■■□□□ 1
CDKL3-206ENST00000521118 AKNAQ7Z591 1439 aa21.29■■□□□ 1
CDKL3-206ENST00000521118 PPP1R15AO75807 674 aaPredicted RBP21.29■■□□□ 1
CDKL3-206ENST00000521118 TROQ12816 1431 aaPredicted RBP21.28■■□□□ 1
CDKL3-206ENST00000521118 CARMIL2Q6F5E8 1435 aa21.28■■□□□ 1
CDKL3-206ENST00000521118 DAPK1P53355 1430 aa21.28■■□□□ 1
CDKL3-206ENST00000521118 ABCC5O15440 1437 aa21.27■■□□□ 1
CDKL3-206ENST00000521118 DNMT1P26358 1616 aaKnown RBP21.27■■□□□ 1
CDKL3-206ENST00000521118 TIMELESSQ9UNS1 1208 aa21.26■□□□□ 0.99
CDKL3-206ENST00000521118 ABCA8O94911 1581 aa21.26■□□□□ 0.99
CDKL3-206ENST00000521118 KDM5BQ9UGL1 1544 aa21.25■□□□□ 0.99
CDKL3-206ENST00000521118 ADCY10Q96PN6 1610 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms