RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 RUSC2Q8N2Y8 1516 aa35.51■■■■□ 3.27
PABPC1-217ENST00000521067 KIAA0586Q9BVV6 1533 aa35.41■■■■□ 3.26
PABPC1-217ENST00000521067 CARMIL1Q5VZK9 1371 aa35.34■■■■□ 3.25
PABPC1-217ENST00000521067 CUL7Q14999 1698 aa35.33■■■■□ 3.25
PABPC1-217ENST00000521067 NPM1P06748 294 aaKnown RBP eCLIP35.25■■■■□ 3.23
PABPC1-217ENST00000521067 KIF13AQ9H1H9 1805 aa35.22■■■■□ 3.23
PABPC1-217ENST00000521067 FAM69CQ0P6D2 419 aa35.21■■■■□ 3.23
PABPC1-217ENST00000521067 ADCY10Q96PN6 1610 aa35.21■■■■□ 3.23
PABPC1-217ENST00000521067 ABCC10Q5T3U5 1492 aa35.17■■■■□ 3.22
PABPC1-217ENST00000521067 MAPKBP1O60336 1514 aa35.14■■■■□ 3.22
PABPC1-217ENST00000521067 AEBP2Q6ZN18 517 aaPredicted RBP35.12■■■■□ 3.21
PABPC1-217ENST00000521067 PTPRGP23470 1445 aa35.12■■■■□ 3.21
PABPC1-217ENST00000521067 TTBK1Q5TCY1 1321 aaPredicted RBP35.1■■■■□ 3.21
PABPC1-217ENST00000521067 TNIKQ9UKE5 1360 aa35.03■■■■□ 3.2
PABPC1-217ENST00000521067 CARMIL2Q6F5E8 1435 aa35.02■■■■□ 3.2
PABPC1-217ENST00000521067 DIP2BQ9P265 1576 aa35.02■■■■□ 3.2
PABPC1-217ENST00000521067 IQGAP2Q13576 1575 aa35■■■■□ 3.19
PABPC1-217ENST00000521067 RAPGEF2Q9Y4G8 1499 aa34.96■■■■□ 3.19
PABPC1-217ENST00000521067 DISP1Q96F81 1524 aa34.93■■■■□ 3.18
PABPC1-217ENST00000521067 ABCC2Q92887 1545 aa34.88■■■■□ 3.17
PABPC1-217ENST00000521067 UACAQ9BZF9 1416 aa34.82■■■■□ 3.17
PABPC1-217ENST00000521067 UGGT2Q9NYU1 1516 aa34.82■■■■□ 3.16
PABPC1-217ENST00000521067 UHRF1BP1LA0JNW5 1464 aa34.82■■■■□ 3.16
PABPC1-217ENST00000521067 ASXL2Q76L83 1435 aa34.8■■■■□ 3.16
PABPC1-217ENST00000521067 TSPOAP1O95153 1857 aa34.74■■■■□ 3.15
PABPC1-217ENST00000521067 PLB1Q6P1J6 1458 aa34.73■■■■□ 3.15
PABPC1-217ENST00000521067 KIAA0556O60303 1618 aa34.69■■■■□ 3.14
PABPC1-217ENST00000521067 KDM6BO15054 1643 aa34.68■■■■□ 3.14
PABPC1-217ENST00000521067 KDM5BQ9UGL1 1544 aa34.68■■■■□ 3.14
PABPC1-217ENST00000521067 PRXQ9BXM0 1461 aa34.64■■■■□ 3.14
PABPC1-217ENST00000521067 GLI2P10070 1586 aa34.63■■■■□ 3.13
PABPC1-217ENST00000521067 EPRSP07814 1512 aaKnown RBP34.58■■■■□ 3.13
PABPC1-217ENST00000521067 KDM4FA0A1W2PPD8 638 aa34.56■■■■□ 3.12
PABPC1-217ENST00000521067 PPRC1Q5VV67 1664 aaKnown RBP34.56■■■■□ 3.12
PABPC1-217ENST00000521067 ZCCHC11Q5TAX3 1644 aaKnown RBP34.53■■■■□ 3.12
PABPC1-217ENST00000521067 CTTNBP2Q8WZ74 1663 aa34.51■■■■□ 3.12
PABPC1-217ENST00000521067 GOLGA3Q08378 1498 aa34.49■■■■□ 3.11
PABPC1-217ENST00000521067 COL17A1Q9UMD9 1497 aaPredicted RBP34.48■■■■□ 3.11
PABPC1-217ENST00000521067 MAP3K4Q9Y6R4 1608 aa34.42■■■■□ 3.1
PABPC1-217ENST00000521067 CSRNP3Q8WYN3 585 aa34.42■■■■□ 3.1
PABPC1-217ENST00000521067 ABCA8O94911 1581 aa34.41■■■■□ 3.1
PABPC1-217ENST00000521067 WDR7Q9Y4E6 1490 aa34.41■■■■□ 3.1
PABPC1-217ENST00000521067 P3H3Q8IVL6 736 aa34.38■■■■□ 3.09
PABPC1-217ENST00000521067 KCNH8Q96L42 1107 aa34.36■■■■□ 3.09
PABPC1-217ENST00000521067 TEX14Q8IWB6 1497 aa34.32■■■■□ 3.08
PABPC1-217ENST00000521067 ARID3CA6NKF2 412 aa34.28■■■■□ 3.08
PABPC1-217ENST00000521067 CD109Q6YHK3 1445 aa34.25■■■■□ 3.07
PABPC1-217ENST00000521067 ATP10BO94823 1461 aa34.2■■■■□ 3.07
PABPC1-217ENST00000521067 MAGI3Q5TCQ9 1506 aa34.2■■■■□ 3.06
PABPC1-217ENST00000521067 FAM9AQ8IZU1 332 aaPredicted RBP34.15■■■■□ 3.06
PABPC1-217ENST00000521067 ADGRL1O94910 1474 aa34.14■■■■□ 3.06
PABPC1-217ENST00000521067 SAMD9Q5K651 1589 aa34.13■■■■□ 3.05
PABPC1-217ENST00000521067 EEA1Q15075 1411 aa34.13■■■■□ 3.05
PABPC1-217ENST00000521067 CFAP43Q8NDM7 1665 aa34.12■■■■□ 3.05
PABPC1-217ENST00000521067 RANGAP1P46060 587 aaPredicted RBP34.11■■■■□ 3.05
PABPC1-217ENST00000521067 FHOD3Q2V2M9 1422 aa33.99■■■■□ 3.03
PABPC1-217ENST00000521067 RAPGEF6Q8TEU7 1601 aa33.98■■■■□ 3.03
PABPC1-217ENST00000521067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.97■■■■□ 3.03
PABPC1-217ENST00000521067 HNRNPUL2Q1KMD3 747 aaKnown RBP33.97■■■■□ 3.03
PABPC1-217ENST00000521067 NUP153P49790 1475 aaKnown RBP33.95■■■■□ 3.03
PABPC1-217ENST00000521067 ARAP3Q8WWN8 1544 aa33.93■■■■□ 3.02
PABPC1-217ENST00000521067 ABCA9Q8IUA7 1624 aa33.9■■■■□ 3.02
PABPC1-217ENST00000521067 RAPGEF3O95398 923 aa33.85■■■■□ 3.01
PABPC1-217ENST00000521067 KIF21BO75037 1637 aa33.84■■■■□ 3.01
PABPC1-217ENST00000521067 PHLDB1Q86UU1 1377 aa33.84■■■■□ 3.01
PABPC1-217ENST00000521067 EHMT2Q96KQ7 1210 aa33.82■■■■□ 3
PABPC1-217ENST00000521067 CHIC1Q5VXU3 224 aa33.81■■■■□ 3
PABPC1-217ENST00000521067 PLEKHD1A6NEE1 506 aa33.8■■■■□ 3
PABPC1-217ENST00000521067 NEO1Q92859 1461 aa33.77■■■■□ 3
PABPC1-217ENST00000521067 EFCAB5A4FU69 1503 aa33.74■■■□□ 2.99
PABPC1-217ENST00000521067 UBTFP17480 764 aaKnown RBP33.72■■■□□ 2.99
PABPC1-217ENST00000521067 HECW2Q9P2P5 1572 aa33.65■■■□□ 2.98
PABPC1-217ENST00000521067 FRMPD1Q5SYB0 1578 aa33.64■■■□□ 2.98
PABPC1-217ENST00000521067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.63■■■□□ 2.97
PABPC1-217ENST00000521067 CDK13Q14004 1512 aaKnown RBP33.62■■■□□ 2.97
PABPC1-217ENST00000521067 AKNAQ7Z591 1439 aa33.6■■■□□ 2.97
PABPC1-217ENST00000521067 ARHGAP35Q9NRY4 1499 aa33.57■■■□□ 2.97
PABPC1-217ENST00000521067 FANCAO15360 1455 aa33.56■■■□□ 2.96
PABPC1-217ENST00000521067 ATP1B4Q9UN42 357 aaPredicted RBP33.56■■■□□ 2.96
PABPC1-217ENST00000521067 DENND4BO75064 1496 aaPredicted RBP33.56■■■□□ 2.96
PABPC1-217ENST00000521067 TTC37Q6PGP7 1564 aa33.55■■■□□ 2.96
PABPC1-217ENST00000521067 FMN1Q68DA7 1419 aa33.51■■■□□ 2.95
PABPC1-217ENST00000521067 ARID4BQ4LE39 1312 aaPredicted RBP33.51■■■□□ 2.95
PABPC1-217ENST00000521067 ADAMTSL3P82987 1691 aa33.5■■■□□ 2.95
PABPC1-217ENST00000521067 ILDR1Q86SU0 546 aaPredicted RBP33.49■■■□□ 2.95
PABPC1-217ENST00000521067 PTPRMP28827 1452 aa33.49■■■□□ 2.95
PABPC1-217ENST00000521067 PLCH2O75038 1416 aa33.45■■■□□ 2.95
PABPC1-217ENST00000521067 RICTORQ6R327 1708 aa33.45■■■□□ 2.95
PABPC1-217ENST00000521067 BCORL1Q5H9F3 1711 aa33.4■■■□□ 2.94
PABPC1-217ENST00000521067 ARHGEF40Q8TER5 1519 aa33.4■■■□□ 2.94
PABPC1-217ENST00000521067 CFAP74Q9C0B2 1584 aa33.39■■■□□ 2.94
PABPC1-217ENST00000521067 HECW1Q76N89 1606 aa33.39■■■□□ 2.93
PABPC1-217ENST00000521067 YEATS2Q9ULM3 1422 aa33.38■■■□□ 2.93
PABPC1-217ENST00000521067 CDK11AQ9UQ88 783 aaPredicted RBP33.38■■■□□ 2.93
PABPC1-217ENST00000521067 SCAPERQ9BY12 1400 aa33.37■■■□□ 2.93
PABPC1-217ENST00000521067 ZMYM4Q5VZL5 1548 aa33.34■■■□□ 2.93
PABPC1-217ENST00000521067 MADDQ8WXG6 1647 aa33.34■■■□□ 2.93
PABPC1-217ENST00000521067 EFCAB2Q5VUJ9 269 aa33.33■■■□□ 2.93
PABPC1-217ENST00000521067 TROQ12816 1431 aaPredicted RBP33.3■■■□□ 2.92
PABPC1-217ENST00000521067 POGZQ7Z3K3 1410 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms