RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 CUL7Q14999 1698 aa35.26■■■■□ 3.23
SNHG6-203ENST00000520944 CARMIL1Q5VZK9 1371 aa35.25■■■■□ 3.23
SNHG6-203ENST00000520944 RUSC2Q8N2Y8 1516 aa35.23■■■■□ 3.23
SNHG6-203ENST00000520944 KIAA0586Q9BVV6 1533 aa35.21■■■■□ 3.23
SNHG6-203ENST00000520944 NPM1P06748 294 aaKnown RBP eCLIP35.04■■■■□ 3.2
SNHG6-203ENST00000520944 RAPGEF2Q9Y4G8 1499 aa34.93■■■■□ 3.18
SNHG6-203ENST00000520944 CARMIL2Q6F5E8 1435 aa34.92■■■■□ 3.18
SNHG6-203ENST00000520944 TTBK1Q5TCY1 1321 aaPredicted RBP34.89■■■■□ 3.18
SNHG6-203ENST00000520944 PTPRGP23470 1445 aa34.89■■■■□ 3.18
SNHG6-203ENST00000520944 IQGAP2Q13576 1575 aa34.86■■■■□ 3.17
SNHG6-203ENST00000520944 TNIKQ9UKE5 1360 aa34.84■■■■□ 3.17
SNHG6-203ENST00000520944 ADCY10Q96PN6 1610 aa34.8■■■■□ 3.16
SNHG6-203ENST00000520944 FAM69CQ0P6D2 419 aa34.79■■■■□ 3.16
SNHG6-203ENST00000520944 MAPKBP1O60336 1514 aa34.73■■■■□ 3.15
SNHG6-203ENST00000520944 ABCC10Q5T3U5 1492 aa34.71■■■■□ 3.15
SNHG6-203ENST00000520944 DISP1Q96F81 1524 aa34.67■■■■□ 3.14
SNHG6-203ENST00000520944 UGGT2Q9NYU1 1516 aa34.65■■■■□ 3.14
SNHG6-203ENST00000520944 KIF13AQ9H1H9 1805 aa34.65■■■■□ 3.14
SNHG6-203ENST00000520944 PRXQ9BXM0 1461 aa34.6■■■■□ 3.13
SNHG6-203ENST00000520944 UACAQ9BZF9 1416 aa34.59■■■■□ 3.13
SNHG6-203ENST00000520944 ABCC2Q92887 1545 aa34.59■■■■□ 3.13
SNHG6-203ENST00000520944 DIP2BQ9P265 1576 aa34.55■■■■□ 3.12
SNHG6-203ENST00000520944 UHRF1BP1LA0JNW5 1464 aa34.55■■■■□ 3.12
SNHG6-203ENST00000520944 CSRNP3Q8WYN3 585 aa34.54■■■■□ 3.12
SNHG6-203ENST00000520944 KIAA0556O60303 1618 aa34.51■■■■□ 3.11
SNHG6-203ENST00000520944 GOLGA3Q08378 1498 aa34.48■■■■□ 3.11
SNHG6-203ENST00000520944 ASXL2Q76L83 1435 aa34.47■■■■□ 3.11
SNHG6-203ENST00000520944 PLB1Q6P1J6 1458 aa34.46■■■■□ 3.11
SNHG6-203ENST00000520944 CTTNBP2Q8WZ74 1663 aa34.46■■■■□ 3.11
SNHG6-203ENST00000520944 AEBP2Q6ZN18 517 aaPredicted RBP34.42■■■■□ 3.1
SNHG6-203ENST00000520944 FAM9AQ8IZU1 332 aaPredicted RBP34.39■■■■□ 3.1
SNHG6-203ENST00000520944 KDM5BQ9UGL1 1544 aa34.38■■■■□ 3.09
SNHG6-203ENST00000520944 EEA1Q15075 1411 aa34.38■■■■□ 3.09
SNHG6-203ENST00000520944 P3H3Q8IVL6 736 aa34.28■■■■□ 3.08
SNHG6-203ENST00000520944 TSPOAP1O95153 1857 aa34.28■■■■□ 3.08
SNHG6-203ENST00000520944 GLI2P10070 1586 aa34.26■■■■□ 3.07
SNHG6-203ENST00000520944 ZCCHC11Q5TAX3 1644 aaKnown RBP34.25■■■■□ 3.07
SNHG6-203ENST00000520944 EPRSP07814 1512 aaKnown RBP34.23■■■■□ 3.07
SNHG6-203ENST00000520944 KDM6BO15054 1643 aa34.21■■■■□ 3.07
SNHG6-203ENST00000520944 ABCA8O94911 1581 aa34.18■■■■□ 3.06
SNHG6-203ENST00000520944 WDR7Q9Y4E6 1490 aa34.16■■■■□ 3.06
SNHG6-203ENST00000520944 RANGAP1P46060 587 aaPredicted RBP34.14■■■■□ 3.06
SNHG6-203ENST00000520944 CHIC1Q5VXU3 224 aa34.13■■■■□ 3.05
SNHG6-203ENST00000520944 KCNH8Q96L42 1107 aa34.13■■■■□ 3.05
SNHG6-203ENST00000520944 ARID3CA6NKF2 412 aa34.07■■■■□ 3.04
SNHG6-203ENST00000520944 TEX14Q8IWB6 1497 aa34.06■■■■□ 3.04
SNHG6-203ENST00000520944 MAP3K4Q9Y6R4 1608 aa34.04■■■■□ 3.04
SNHG6-203ENST00000520944 PPRC1Q5VV67 1664 aaKnown RBP34.03■■■■□ 3.04
SNHG6-203ENST00000520944 SAMD9Q5K651 1589 aa34.03■■■■□ 3.04
SNHG6-203ENST00000520944 CD109Q6YHK3 1445 aa33.97■■■■□ 3.03
SNHG6-203ENST00000520944 ATP10BO94823 1461 aa33.97■■■■□ 3.03
SNHG6-203ENST00000520944 KIF21BO75037 1637 aa33.97■■■■□ 3.03
SNHG6-203ENST00000520944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.96■■■■□ 3.03
SNHG6-203ENST00000520944 HNRNPUL2Q1KMD3 747 aaKnown RBP33.96■■■■□ 3.03
SNHG6-203ENST00000520944 UBTFP17480 764 aaKnown RBP33.94■■■■□ 3.02
SNHG6-203ENST00000520944 EHMT2Q96KQ7 1210 aa33.94■■■■□ 3.02
SNHG6-203ENST00000520944 FHOD3Q2V2M9 1422 aa33.92■■■■□ 3.02
SNHG6-203ENST00000520944 COL17A1Q9UMD9 1497 aaPredicted RBP33.9■■■■□ 3.02
SNHG6-203ENST00000520944 RAPGEF6Q8TEU7 1601 aa33.88■■■■□ 3.01
SNHG6-203ENST00000520944 MAGI3Q5TCQ9 1506 aa33.87■■■■□ 3.01
SNHG6-203ENST00000520944 CFAP43Q8NDM7 1665 aa33.84■■■■□ 3.01
SNHG6-203ENST00000520944 KDM4FA0A1W2PPD8 638 aa33.83■■■■□ 3.01
SNHG6-203ENST00000520944 EFCAB5A4FU69 1503 aa33.82■■■■□ 3
SNHG6-203ENST00000520944 NUP153P49790 1475 aaKnown RBP33.79■■■■□ 3
SNHG6-203ENST00000520944 PLEKHD1A6NEE1 506 aa33.75■■■□□ 2.99
SNHG6-203ENST00000520944 PHLDB1Q86UU1 1377 aa33.66■■■□□ 2.98
SNHG6-203ENST00000520944 ABCA9Q8IUA7 1624 aa33.65■■■□□ 2.98
SNHG6-203ENST00000520944 ATP1B4Q9UN42 357 aaPredicted RBP33.64■■■□□ 2.98
SNHG6-203ENST00000520944 ARAP3Q8WWN8 1544 aa33.6■■■□□ 2.97
SNHG6-203ENST00000520944 FMN1Q68DA7 1419 aa33.6■■■□□ 2.97
SNHG6-203ENST00000520944 ADGRL1O94910 1474 aa33.58■■■□□ 2.97
SNHG6-203ENST00000520944 ARHGAP35Q9NRY4 1499 aa33.56■■■□□ 2.96
SNHG6-203ENST00000520944 NEO1Q92859 1461 aa33.54■■■□□ 2.96
SNHG6-203ENST00000520944 RAPGEF3O95398 923 aa33.5■■■□□ 2.95
SNHG6-203ENST00000520944 CDK11AQ9UQ88 783 aaPredicted RBP33.48■■■□□ 2.95
SNHG6-203ENST00000520944 CDK13Q14004 1512 aaKnown RBP33.48■■■□□ 2.95
SNHG6-203ENST00000520944 HECW1Q76N89 1606 aa33.42■■■□□ 2.94
SNHG6-203ENST00000520944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.41■■■□□ 2.94
SNHG6-203ENST00000520944 FANCAO15360 1455 aa33.37■■■□□ 2.93
SNHG6-203ENST00000520944 AKNAQ7Z591 1439 aa33.37■■■□□ 2.93
SNHG6-203ENST00000520944 DENND4BO75064 1496 aaPredicted RBP33.33■■■□□ 2.93
SNHG6-203ENST00000520944 TTC37Q6PGP7 1564 aa33.32■■■□□ 2.92
SNHG6-203ENST00000520944 CFAP74Q9C0B2 1584 aa33.29■■■□□ 2.92
SNHG6-203ENST00000520944 PLCH2O75038 1416 aa33.28■■■□□ 2.92
SNHG6-203ENST00000520944 CLIP1P30622 1438 aa33.25■■■□□ 2.91
SNHG6-203ENST00000520944 ARID4BQ4LE39 1312 aaPredicted RBP33.25■■■□□ 2.91
SNHG6-203ENST00000520944 EFCAB2Q5VUJ9 269 aa33.24■■■□□ 2.91
SNHG6-203ENST00000520944 TROQ12816 1431 aaPredicted RBP33.24■■■□□ 2.91
SNHG6-203ENST00000520944 FRMPD1Q5SYB0 1578 aa33.23■■■□□ 2.91
SNHG6-203ENST00000520944 CASKIN1Q8WXD9 1431 aa33.23■■■□□ 2.91
SNHG6-203ENST00000520944 SCAPERQ9BY12 1400 aa33.18■■■□□ 2.9
SNHG6-203ENST00000520944 CCDC18Q5T9S5 1454 aa33.16■■■□□ 2.9
SNHG6-203ENST00000520944 KIF14Q15058 1648 aa33.16■■■□□ 2.9
SNHG6-203ENST00000520944 RICTORQ6R327 1708 aa33.14■■■□□ 2.89
SNHG6-203ENST00000520944 PCF11O94913 1555 aaKnown RBP33.13■■■□□ 2.89
SNHG6-203ENST00000520944 FYCO1Q9BQS8 1478 aa33.09■■■□□ 2.89
SNHG6-203ENST00000520944 MYO5CQ9NQX4 1742 aa33.08■■■□□ 2.89
SNHG6-203ENST00000520944 MAGI2Q86UL8 1455 aa33.08■■■□□ 2.89
SNHG6-203ENST00000520944 POGZQ7Z3K3 1410 aa33.08■■■□□ 2.89
SNHG6-203ENST00000520944 ARHGEF40Q8TER5 1519 aa33.07■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms