RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 SLC24A1O60721 1099 aa16.92■□□□□ 0.3
PCDHGB6-201ENST00000520790 GGT6Q6P531 493 aa16.92■□□□□ 0.3
PCDHGB6-201ENST00000520790 RRP7BPQ9NSQ0 103 aa16.88■□□□□ 0.29
PCDHGB6-201ENST00000520790 A0A0G2JS52 829 aa16.88■□□□□ 0.29
PCDHGB6-201ENST00000520790 AQRO60306 1485 aaKnown RBP eCLIP16.88■□□□□ 0.29
PCDHGB6-201ENST00000520790 CLIP1P30622 1438 aa16.86■□□□□ 0.29
PCDHGB6-201ENST00000520790 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.28
PCDHGB6-201ENST00000520790 TOP2AP11388 1531 aaKnown RBP16.81■□□□□ 0.28
PCDHGB6-201ENST00000520790 KDM2AQ9Y2K7 1162 aa16.8■□□□□ 0.28
PCDHGB6-201ENST00000520790 PTPRGP23470 1445 aa16.79■□□□□ 0.28
PCDHGB6-201ENST00000520790 EFCAB2Q5VUJ9 269 aa16.79■□□□□ 0.28
PCDHGB6-201ENST00000520790 RAD54L2Q9Y4B4 1467 aa16.79■□□□□ 0.28
PCDHGB6-201ENST00000520790 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
PCDHGB6-201ENST00000520790 ZBTB7CA1YPR0 619 aa16.77■□□□□ 0.27
PCDHGB6-201ENST00000520790 RGL3Q3MIN7 710 aa16.76■□□□□ 0.27
PCDHGB6-201ENST00000520790 LMOD2Q6P5Q4 547 aa16.76■□□□□ 0.27
PCDHGB6-201ENST00000520790 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
PCDHGB6-201ENST00000520790 EEA1Q15075 1411 aa16.73■□□□□ 0.27
PCDHGB6-201ENST00000520790 CCNB3Q8WWL7 1395 aa16.71■□□□□ 0.27
PCDHGB6-201ENST00000520790 MRC2Q9UBG0 1479 aa16.71■□□□□ 0.27
PCDHGB6-201ENST00000520790 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
PCDHGB6-201ENST00000520790 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
PCDHGB6-201ENST00000520790 GAPVD1Q14C86 1478 aa16.69■□□□□ 0.26
PCDHGB6-201ENST00000520790 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
PCDHGB6-201ENST00000520790 MYT1Q01538 1121 aa16.68■□□□□ 0.26
PCDHGB6-201ENST00000520790 FGD5Q6ZNL6 1462 aa16.66■□□□□ 0.26
PCDHGB6-201ENST00000520790 YTHDC1Q96MU7 727 aaKnown RBP16.66■□□□□ 0.26
PCDHGB6-201ENST00000520790 KIF3BO15066 747 aa16.62■□□□□ 0.25
PCDHGB6-201ENST00000520790 HNRNPMP52272 730 aaKnown RBP eCLIP16.59■□□□□ 0.25
PCDHGB6-201ENST00000520790 HDGFP51858 240 aaKnown RBP16.55■□□□□ 0.24
PCDHGB6-201ENST00000520790 SPAG9O60271 1321 aaKnown RBP16.55■□□□□ 0.24
PCDHGB6-201ENST00000520790 NEFMP07197 916 aa16.55■□□□□ 0.24
PCDHGB6-201ENST00000520790 CFTRP13569 1480 aa16.55■□□□□ 0.24
PCDHGB6-201ENST00000520790 CEP162Q5TB80 1403 aa16.54■□□□□ 0.24
PCDHGB6-201ENST00000520790 IFT140Q96RY7 1462 aa16.53■□□□□ 0.24
PCDHGB6-201ENST00000520790 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.24
PCDHGB6-201ENST00000520790 GRIN2BQ13224 1484 aa16.52■□□□□ 0.24
PCDHGB6-201ENST00000520790 RAPGEF2Q9Y4G8 1499 aa16.52■□□□□ 0.24
PCDHGB6-201ENST00000520790 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.23
PCDHGB6-201ENST00000520790 PRG4Q92954 1404 aaPredicted RBP16.51■□□□□ 0.23
PCDHGB6-201ENST00000520790 POGKQ9P215 609 aa16.51■□□□□ 0.23
PCDHGB6-201ENST00000520790 FHOD3Q2V2M9 1422 aa16.51■□□□□ 0.23
PCDHGB6-201ENST00000520790 KANK1Q14678 1352 aa16.5■□□□□ 0.23
PCDHGB6-201ENST00000520790 TMC1Q8TDI8 760 aa16.47■□□□□ 0.23
PCDHGB6-201ENST00000520790 IGF1RP08069 1367 aa16.47■□□□□ 0.23
PCDHGB6-201ENST00000520790 HRCP23327 699 aa16.46■□□□□ 0.23
PCDHGB6-201ENST00000520790 EID1Q9Y6B2 187 aa16.46■□□□□ 0.23
PCDHGB6-201ENST00000520790 TONSLQ96HA7 1378 aa16.46■□□□□ 0.23
PCDHGB6-201ENST00000520790 HMGXB3Q12766 1538 aa16.46■□□□□ 0.23
PCDHGB6-201ENST00000520790 SAFB2Q14151 953 aaKnown RBP eCLIP16.45■□□□□ 0.22
PCDHGB6-201ENST00000520790 TNIKQ9UKE5 1360 aa16.45■□□□□ 0.22
PCDHGB6-201ENST00000520790 NUTM2DQ5VT03 806 aaPredicted RBP16.43■□□□□ 0.22
PCDHGB6-201ENST00000520790 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
PCDHGB6-201ENST00000520790 STK26Q9P289 416 aa16.43■□□□□ 0.22
PCDHGB6-201ENST00000520790 UNC13AQ9UPW8 1703 aa16.42■□□□□ 0.22
PCDHGB6-201ENST00000520790 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
PCDHGB6-201ENST00000520790 FMN1Q68DA7 1419 aa16.41■□□□□ 0.22
PCDHGB6-201ENST00000520790 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.21
PCDHGB6-201ENST00000520790 BCL11AQ9H165 835 aa16.38■□□□□ 0.21
PCDHGB6-201ENST00000520790 SOX12O15370 315 aa16.38■□□□□ 0.21
PCDHGB6-201ENST00000520790 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
PCDHGB6-201ENST00000520790 CCDC9Q9Y3X0 531 aaKnown RBP16.37■□□□□ 0.21
PCDHGB6-201ENST00000520790 RAPGEF3O95398 923 aa16.37■□□□□ 0.21
PCDHGB6-201ENST00000520790 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
PCDHGB6-201ENST00000520790 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
PCDHGB6-201ENST00000520790 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.21
PCDHGB6-201ENST00000520790 AFAP1Q8N556 730 aa16.33■□□□□ 0.2
PCDHGB6-201ENST00000520790 KANK4Q5T7N3 995 aaPredicted RBP16.33■□□□□ 0.2
PCDHGB6-201ENST00000520790 NUTM2FA1L443 756 aa16.33■□□□□ 0.2
PCDHGB6-201ENST00000520790 PPM1GO15355 546 aaPredicted RBP16.33■□□□□ 0.2
PCDHGB6-201ENST00000520790 PAK3O75914 559 aaPredicted RBP16.3■□□□□ 0.2
PCDHGB6-201ENST00000520790 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
PCDHGB6-201ENST00000520790 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
PCDHGB6-201ENST00000520790 ARXQ96QS3 562 aa16.28■□□□□ 0.2
PCDHGB6-201ENST00000520790 RSPH4AQ5TD94 716 aa16.26■□□□□ 0.19
PCDHGB6-201ENST00000520790 NEFLP07196 543 aa16.26■□□□□ 0.19
PCDHGB6-201ENST00000520790 PKD2Q13563 968 aa16.25■□□□□ 0.19
PCDHGB6-201ENST00000520790 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
PCDHGB6-201ENST00000520790 DCAF11Q8TEB1 546 aa16.24■□□□□ 0.19
PCDHGB6-201ENST00000520790 FOXD1Q16676 465 aa16.24■□□□□ 0.19
PCDHGB6-201ENST00000520790 NUP155O75694 1391 aa16.23■□□□□ 0.19
PCDHGB6-201ENST00000520790 SRPK2P78362 688 aaKnown RBP16.23■□□□□ 0.19
PCDHGB6-201ENST00000520790 HIRIP3Q9BW71 556 aaPredicted RBP16.22■□□□□ 0.19
PCDHGB6-201ENST00000520790 CCDC18Q5T9S5 1454 aa16.2■□□□□ 0.18
PCDHGB6-201ENST00000520790 ANKRD30AQ9BXX3 1397 aa16.19■□□□□ 0.18
PCDHGB6-201ENST00000520790 MEX3CQ5U5Q3 659 aaKnown RBP16.19■□□□□ 0.18
PCDHGB6-201ENST00000520790 PIP4K2BP78356 416 aa16.18■□□□□ 0.18
PCDHGB6-201ENST00000520790 URB2Q14146 1524 aaKnown RBP16.17■□□□□ 0.18
PCDHGB6-201ENST00000520790 ANP32CO43423 234 aa16.17■□□□□ 0.18
PCDHGB6-201ENST00000520790 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
PCDHGB6-201ENST00000520790 ZNF644Q9H582 1327 aaPredicted RBP16.15■□□□□ 0.18
PCDHGB6-201ENST00000520790 DNMBPQ6XZF7 1577 aa16.15■□□□□ 0.18
PCDHGB6-201ENST00000520790 CSB-PGBD3P0DP91 1061 aa16.14■□□□□ 0.18
PCDHGB6-201ENST00000520790 ARHGAP35Q9NRY4 1499 aa16.14■□□□□ 0.17
PCDHGB6-201ENST00000520790 SYNJ2O15056 1496 aa16.13■□□□□ 0.17
PCDHGB6-201ENST00000520790 TNNT2P45379 298 aaPredicted RBP16.12■□□□□ 0.17
PCDHGB6-201ENST00000520790 SALL2Q9Y467 1007 aaPredicted RBP16.12■□□□□ 0.17
PCDHGB6-201ENST00000520790 CUX1P39880 1505 aa16.12■□□□□ 0.17
PCDHGB6-201ENST00000520790 NGDNQ8NEJ9 315 aaKnown RBP16.11■□□□□ 0.17
PCDHGB6-201ENST00000520790 NPHP1O15259 732 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms