RNA–Protein interactions for RNA: ENST00000520717.1

SNTB1-205, Transcript of syntrophin beta 1, humanhuman

TSL 2

Gene SNTB1, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-205ENST00000520717 PRG4Q92954 1404 aaPredicted RBP50.45■■■■■ 5.67
SNTB1-205ENST00000520717 JPH4Q96JJ6 628 aa50.43■■■■■ 5.66
SNTB1-205ENST00000520717 CARMIL1Q5VZK9 1371 aa50.33■■■■■ 5.65
SNTB1-205ENST00000520717 KIAA0586Q9BVV6 1533 aa50.32■■■■■ 5.65
SNTB1-205ENST00000520717 RAPGEF2Q9Y4G8 1499 aa49.96■■■■■ 5.59
SNTB1-205ENST00000520717 IQGAP2Q13576 1575 aa49.93■■■■■ 5.58
SNTB1-205ENST00000520717 CARMIL2Q6F5E8 1435 aa49.81■■■■■ 5.56
SNTB1-205ENST00000520717 ADCY10Q96PN6 1610 aa49.81■■■■■ 5.56
SNTB1-205ENST00000520717 NPM1P06748 294 aaKnown RBP eCLIP49.73■■■■■ 5.55
SNTB1-205ENST00000520717 PTPRGP23470 1445 aa49.73■■■■■ 5.55
SNTB1-205ENST00000520717 TNIKQ9UKE5 1360 aa49.7■■■■■ 5.55
SNTB1-205ENST00000520717 MAPKBP1O60336 1514 aa49.66■■■■■ 5.54
SNTB1-205ENST00000520717 UGGT2Q9NYU1 1516 aa49.64■■■■■ 5.54
SNTB1-205ENST00000520717 DISP1Q96F81 1524 aa49.63■■■■■ 5.54
SNTB1-205ENST00000520717 KIF13AQ9H1H9 1805 aa49.61■■■■■ 5.53
SNTB1-205ENST00000520717 PRXQ9BXM0 1461 aa49.6■■■■■ 5.53
SNTB1-205ENST00000520717 TTBK1Q5TCY1 1321 aaPredicted RBP49.58■■■■■ 5.53
SNTB1-205ENST00000520717 CTTNBP2Q8WZ74 1663 aa49.54■■■■■ 5.52
SNTB1-205ENST00000520717 ABCC10Q5T3U5 1492 aa49.52■■■■■ 5.52
SNTB1-205ENST00000520717 KIAA0556O60303 1618 aa49.48■■■■■ 5.51
SNTB1-205ENST00000520717 DIP2BQ9P265 1576 aa49.43■■■■■ 5.5
SNTB1-205ENST00000520717 ABCC2Q92887 1545 aa49.42■■■■■ 5.5
SNTB1-205ENST00000520717 FAM69CQ0P6D2 419 aa49.41■■■■■ 5.5
SNTB1-205ENST00000520717 UHRF1BP1LA0JNW5 1464 aa49.4■■■■■ 5.5
SNTB1-205ENST00000520717 UACAQ9BZF9 1416 aa49.38■■■■■ 5.5
SNTB1-205ENST00000520717 CSRNP3Q8WYN3 585 aa49.31■■■■■ 5.48
SNTB1-205ENST00000520717 GOLGA3Q08378 1498 aa49.3■■■■■ 5.48
SNTB1-205ENST00000520717 EEA1Q15075 1411 aa49.27■■■■■ 5.48
SNTB1-205ENST00000520717 ASXL2Q76L83 1435 aa49.17■■■■■ 5.46
SNTB1-205ENST00000520717 PLB1Q6P1J6 1458 aa49.17■■■■■ 5.46
SNTB1-205ENST00000520717 KDM5BQ9UGL1 1544 aa49.16■■■■■ 5.46
SNTB1-205ENST00000520717 ZCCHC11Q5TAX3 1644 aaKnown RBP49.05■■■■■ 5.44
SNTB1-205ENST00000520717 GLI2P10070 1586 aa48.99■■■■■ 5.43
SNTB1-205ENST00000520717 TSPOAP1O95153 1857 aa48.98■■■■■ 5.43
SNTB1-205ENST00000520717 ABCA8O94911 1581 aa48.98■■■■■ 5.43
SNTB1-205ENST00000520717 FAM9AQ8IZU1 332 aaPredicted RBP48.95■■■■■ 5.43
SNTB1-205ENST00000520717 EPRSP07814 1512 aaKnown RBP48.88■■■■■ 5.42
SNTB1-205ENST00000520717 CHIC1Q5VXU3 224 aa48.88■■■■■ 5.42
SNTB1-205ENST00000520717 SAMD9Q5K651 1589 aa48.88■■■■■ 5.42
SNTB1-205ENST00000520717 KDM6BO15054 1643 aa48.85■■■■■ 5.41
SNTB1-205ENST00000520717 KIF21BO75037 1637 aa48.84■■■■■ 5.41
SNTB1-205ENST00000520717 P3H3Q8IVL6 736 aa48.82■■■■■ 5.41
SNTB1-205ENST00000520717 WDR7Q9Y4E6 1490 aa48.81■■■■■ 5.4
SNTB1-205ENST00000520717 PPRC1Q5VV67 1664 aaKnown RBP48.77■■■■■ 5.4
SNTB1-205ENST00000520717 MAP3K4Q9Y6R4 1608 aa48.74■■■■■ 5.39
SNTB1-205ENST00000520717 RANGAP1P46060 587 aaPredicted RBP48.6■■■■■ 5.37
SNTB1-205ENST00000520717 AEBP2Q6ZN18 517 aaPredicted RBP48.59■■■■■ 5.37
SNTB1-205ENST00000520717 TEX14Q8IWB6 1497 aa48.59■■■■■ 5.37
SNTB1-205ENST00000520717 RAPGEF6Q8TEU7 1601 aa48.57■■■■■ 5.37
SNTB1-205ENST00000520717 ATP10BO94823 1461 aa48.55■■■■■ 5.36
SNTB1-205ENST00000520717 FHOD3Q2V2M9 1422 aa48.54■■■■■ 5.36
SNTB1-205ENST00000520717 EFCAB5A4FU69 1503 aa48.52■■■■■ 5.36
SNTB1-205ENST00000520717 ARID3CA6NKF2 412 aa48.51■■■■■ 5.36
SNTB1-205ENST00000520717 KCNH8Q96L42 1107 aa48.49■■■■■ 5.35
SNTB1-205ENST00000520717 CFAP43Q8NDM7 1665 aa48.47■■■■■ 5.35
SNTB1-205ENST00000520717 CD109Q6YHK3 1445 aa48.42■■■■■ 5.34
SNTB1-205ENST00000520717 MAGI3Q5TCQ9 1506 aa48.39■■■■■ 5.34
SNTB1-205ENST00000520717 UBTFP17480 764 aaKnown RBP48.39■■■■■ 5.34
SNTB1-205ENST00000520717 NUP153P49790 1475 aaKnown RBP48.38■■■■■ 5.34
SNTB1-205ENST00000520717 EHMT2Q96KQ7 1210 aa48.38■■■■■ 5.34
SNTB1-205ENST00000520717 COL17A1Q9UMD9 1497 aaPredicted RBP48.37■■■■■ 5.33
SNTB1-205ENST00000520717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP48.27■■■■■ 5.32
SNTB1-205ENST00000520717 HNRNPUL2Q1KMD3 747 aaKnown RBP48.27■■■■■ 5.32
SNTB1-205ENST00000520717 ABCA9Q8IUA7 1624 aa48.21■■■■■ 5.31
SNTB1-205ENST00000520717 ARHGAP35Q9NRY4 1499 aa48.12■■■■■ 5.29
SNTB1-205ENST00000520717 FMN1Q68DA7 1419 aa48.07■■■■■ 5.28
SNTB1-205ENST00000520717 KDM4FA0A1W2PPD8 638 aa48.04■■■■■ 5.28
SNTB1-205ENST00000520717 PLEKHD1A6NEE1 506 aa48.03■■■■■ 5.28
SNTB1-205ENST00000520717 ARAP3Q8WWN8 1544 aa48■■■■■ 5.27
SNTB1-205ENST00000520717 PHLDB1Q86UU1 1377 aa47.96■■■■■ 5.27
SNTB1-205ENST00000520717 CDK13Q14004 1512 aaKnown RBP47.96■■■■■ 5.27
SNTB1-205ENST00000520717 HECW1Q76N89 1606 aa47.95■■■■■ 5.27
SNTB1-205ENST00000520717 NEO1Q92859 1461 aa47.91■■■■■ 5.26
SNTB1-205ENST00000520717 ADGRL1O94910 1474 aa47.87■■■■■ 5.25
SNTB1-205ENST00000520717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP47.83■■■■■ 5.25
SNTB1-205ENST00000520717 ATP1B4Q9UN42 357 aaPredicted RBP47.83■■■■■ 5.25
SNTB1-205ENST00000520717 TTC37Q6PGP7 1564 aa47.77■■■■■ 5.24
SNTB1-205ENST00000520717 CFAP74Q9C0B2 1584 aa47.69■■■■■ 5.22
SNTB1-205ENST00000520717 CDK11AQ9UQ88 783 aaPredicted RBP47.68■■■■■ 5.22
SNTB1-205ENST00000520717 FANCAO15360 1455 aa47.67■■■■■ 5.22
SNTB1-205ENST00000520717 RAPGEF3O95398 923 aa47.66■■■■■ 5.22
SNTB1-205ENST00000520717 FRMPD1Q5SYB0 1578 aa47.64■■■■■ 5.22
SNTB1-205ENST00000520717 AKNAQ7Z591 1439 aa47.62■■■■■ 5.21
SNTB1-205ENST00000520717 PCF11O94913 1555 aaKnown RBP47.61■■■■■ 5.21
SNTB1-205ENST00000520717 CASKIN1Q8WXD9 1431 aa47.6■■■■■ 5.21
SNTB1-205ENST00000520717 LRRIQ1Q96JM4 1722 aa47.6■■■■■ 5.21
SNTB1-205ENST00000520717 CLIP1P30622 1438 aa47.57■■■■■ 5.21
SNTB1-205ENST00000520717 DENND4BO75064 1496 aaPredicted RBP47.56■■■■■ 5.2
SNTB1-205ENST00000520717 TROQ12816 1431 aaPredicted RBP47.56■■■■■ 5.2
SNTB1-205ENST00000520717 PLCH2O75038 1416 aa47.54■■■■■ 5.2
SNTB1-205ENST00000520717 KIF14Q15058 1648 aa47.53■■■■■ 5.2
SNTB1-205ENST00000520717 CCDC18Q5T9S5 1454 aa47.52■■■■■ 5.2
SNTB1-205ENST00000520717 RICTORQ6R327 1708 aa47.5■■■■■ 5.19
SNTB1-205ENST00000520717 FYCO1Q9BQS8 1478 aa47.46■■■■■ 5.19
SNTB1-205ENST00000520717 MYO5CQ9NQX4 1742 aa47.46■■■■■ 5.19
SNTB1-205ENST00000520717 ARHGEF40Q8TER5 1519 aa47.39■■■■■ 5.18
SNTB1-205ENST00000520717 ZMYM4Q5VZL5 1548 aa47.36■■■■■ 5.17
SNTB1-205ENST00000520717 EFCAB2Q5VUJ9 269 aa47.33■■■■■ 5.17
SNTB1-205ENST00000520717 SCAPERQ9BY12 1400 aa47.32■■■■■ 5.17
SNTB1-205ENST00000520717 POGZQ7Z3K3 1410 aa47.3■■■■■ 5.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms