RNA–Protein interactions for RNA: ENST00000520571.1

DENND3-213, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-213ENST00000520571 SHROOM2Q13796 1616 aa23.21■■□□□ 1.31
DENND3-213ENST00000520571 PRG4Q92954 1404 aaPredicted RBP23.19■■□□□ 1.3
DENND3-213ENST00000520571 KIAA0586Q9BVV6 1533 aa23.17■■□□□ 1.3
DENND3-213ENST00000520571 RAPGEF2Q9Y4G8 1499 aa23.16■■□□□ 1.3
DENND3-213ENST00000520571 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
DENND3-213ENST00000520571 FAM9AQ8IZU1 332 aaPredicted RBP23.09■■□□□ 1.29
DENND3-213ENST00000520571 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
DENND3-213ENST00000520571 IQGAP2Q13576 1575 aa23.04■■□□□ 1.28
DENND3-213ENST00000520571 TRHP20396 242 aaPredicted RBP23.02■■□□□ 1.28
DENND3-213ENST00000520571 PRXQ9BXM0 1461 aa23.02■■□□□ 1.28
DENND3-213ENST00000520571 TTBK1Q5TCY1 1321 aaPredicted RBP23.02■■□□□ 1.28
DENND3-213ENST00000520571 EEA1Q15075 1411 aa22.99■■□□□ 1.27
DENND3-213ENST00000520571 CARMIL2Q6F5E8 1435 aa22.97■■□□□ 1.27
DENND3-213ENST00000520571 CTTNBP2Q8WZ74 1663 aa22.93■■□□□ 1.26
DENND3-213ENST00000520571 PTPRGP23470 1445 aa22.91■■□□□ 1.26
DENND3-213ENST00000520571 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.25
DENND3-213ENST00000520571 UGGT2Q9NYU1 1516 aa22.88■■□□□ 1.25
DENND3-213ENST00000520571 DISP1Q96F81 1524 aa22.87■■□□□ 1.25
DENND3-213ENST00000520571 NPM1P06748 294 aaKnown RBP eCLIP22.87■■□□□ 1.25
DENND3-213ENST00000520571 EHMT2Q96KQ7 1210 aa22.85■■□□□ 1.25
DENND3-213ENST00000520571 KIAA0556O60303 1618 aa22.81■■□□□ 1.24
DENND3-213ENST00000520571 ADCY10Q96PN6 1610 aa22.81■■□□□ 1.24
DENND3-213ENST00000520571 RANGAP1P46060 587 aaPredicted RBP22.8■■□□□ 1.24
DENND3-213ENST00000520571 GOLGA3Q08378 1498 aa22.79■■□□□ 1.24
DENND3-213ENST00000520571 KIF21BO75037 1637 aa22.76■■□□□ 1.23
DENND3-213ENST00000520571 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
DENND3-213ENST00000520571 UBTFP17480 764 aaKnown RBP22.73■■□□□ 1.23
DENND3-213ENST00000520571 UACAQ9BZF9 1416 aa22.72■■□□□ 1.23
DENND3-213ENST00000520571 ABCC2Q92887 1545 aa22.67■■□□□ 1.22
DENND3-213ENST00000520571 UHRF1BP1LA0JNW5 1464 aa22.66■■□□□ 1.22
DENND3-213ENST00000520571 MAPKBP1O60336 1514 aa22.64■■□□□ 1.21
DENND3-213ENST00000520571 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
DENND3-213ENST00000520571 FAM69CQ0P6D2 419 aa22.63■■□□□ 1.21
DENND3-213ENST00000520571 SAMD9Q5K651 1589 aa22.61■■□□□ 1.21
DENND3-213ENST00000520571 KIF13AQ9H1H9 1805 aa22.61■■□□□ 1.21
DENND3-213ENST00000520571 ABCC10Q5T3U5 1492 aa22.58■■□□□ 1.2
DENND3-213ENST00000520571 ARID3CA6NKF2 412 aa22.56■■□□□ 1.2
DENND3-213ENST00000520571 KDM5BQ9UGL1 1544 aa22.56■■□□□ 1.2
DENND3-213ENST00000520571 FHOD3Q2V2M9 1422 aa22.56■■□□□ 1.2
DENND3-213ENST00000520571 ASXL2Q76L83 1435 aa22.56■■□□□ 1.2
DENND3-213ENST00000520571 ABCA8O94911 1581 aa22.55■■□□□ 1.2
DENND3-213ENST00000520571 ZCCHC11Q5TAX3 1644 aaKnown RBP22.55■■□□□ 1.2
DENND3-213ENST00000520571 DIP2BQ9P265 1576 aa22.54■■□□□ 1.2
DENND3-213ENST00000520571 EFCAB5A4FU69 1503 aa22.51■■□□□ 1.19
DENND3-213ENST00000520571 TSPOAP1O95153 1857 aa22.47■■□□□ 1.19
DENND3-213ENST00000520571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.45■■□□□ 1.18
DENND3-213ENST00000520571 HNRNPUL2Q1KMD3 747 aaKnown RBP22.45■■□□□ 1.18
DENND3-213ENST00000520571 RAPGEF6Q8TEU7 1601 aa22.45■■□□□ 1.18
DENND3-213ENST00000520571 KCNH8Q96L42 1107 aa22.43■■□□□ 1.18
DENND3-213ENST00000520571 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
DENND3-213ENST00000520571 EPRSP07814 1512 aaKnown RBP22.41■■□□□ 1.18
DENND3-213ENST00000520571 ATP10BO94823 1461 aa22.41■■□□□ 1.18
DENND3-213ENST00000520571 ARHGAP35Q9NRY4 1499 aa22.4■■□□□ 1.18
DENND3-213ENST00000520571 ATP1B4Q9UN42 357 aaPredicted RBP22.39■■□□□ 1.17
DENND3-213ENST00000520571 GLI2P10070 1586 aa22.38■■□□□ 1.17
DENND3-213ENST00000520571 NUP153P49790 1475 aaKnown RBP22.36■■□□□ 1.17
DENND3-213ENST00000520571 FMN1Q68DA7 1419 aa22.32■■□□□ 1.16
DENND3-213ENST00000520571 MAP3K4Q9Y6R4 1608 aa22.29■■□□□ 1.16
DENND3-213ENST00000520571 CLIP1P30622 1438 aa22.28■■□□□ 1.16
DENND3-213ENST00000520571 PLEKHD1A6NEE1 506 aa22.27■■□□□ 1.16
DENND3-213ENST00000520571 PPRC1Q5VV67 1664 aaKnown RBP22.26■■□□□ 1.15
DENND3-213ENST00000520571 CD109Q6YHK3 1445 aa22.25■■□□□ 1.15
DENND3-213ENST00000520571 LOC105371045A0A1W2PR82 267 aa22.25■■□□□ 1.15
DENND3-213ENST00000520571 KDM6BO15054 1643 aa22.24■■□□□ 1.15
DENND3-213ENST00000520571 CDK13Q14004 1512 aaKnown RBP22.23■■□□□ 1.15
DENND3-213ENST00000520571 TEX14Q8IWB6 1497 aa22.22■■□□□ 1.15
DENND3-213ENST00000520571 HECW1Q76N89 1606 aa22.22■■□□□ 1.15
DENND3-213ENST00000520571 CFAP43Q8NDM7 1665 aa22.22■■□□□ 1.15
DENND3-213ENST00000520571 CDK11AQ9UQ88 783 aaPredicted RBP22.15■■□□□ 1.14
DENND3-213ENST00000520571 MAGI3Q5TCQ9 1506 aa22.15■■□□□ 1.14
DENND3-213ENST00000520571 CEP162Q5TB80 1403 aa22.14■■□□□ 1.14
DENND3-213ENST00000520571 ABCA9Q8IUA7 1624 aa22.14■■□□□ 1.14
DENND3-213ENST00000520571 PCF11O94913 1555 aaKnown RBP22.14■■□□□ 1.13
DENND3-213ENST00000520571 CASKIN1Q8WXD9 1431 aa22.14■■□□□ 1.13
DENND3-213ENST00000520571 LRRIQ1Q96JM4 1722 aa22.1■■□□□ 1.13
DENND3-213ENST00000520571 COL17A1Q9UMD9 1497 aaPredicted RBP22.09■■□□□ 1.13
DENND3-213ENST00000520571 FYCO1Q9BQS8 1478 aa22.07■■□□□ 1.12
DENND3-213ENST00000520571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.06■■□□□ 1.12
DENND3-213ENST00000520571 CCDC18Q5T9S5 1454 aa22.05■■□□□ 1.12
DENND3-213ENST00000520571 TTC37Q6PGP7 1564 aa22.04■■□□□ 1.12
DENND3-213ENST00000520571 TROQ12816 1431 aaPredicted RBP22.02■■□□□ 1.12
DENND3-213ENST00000520571 KIF14Q15058 1648 aa22■■□□□ 1.11
DENND3-213ENST00000520571 NEO1Q92859 1461 aa21.98■■□□□ 1.11
DENND3-213ENST00000520571 PHLDB1Q86UU1 1377 aa21.98■■□□□ 1.11
DENND3-213ENST00000520571 FANCAO15360 1455 aa21.96■■□□□ 1.11
DENND3-213ENST00000520571 ARAP3Q8WWN8 1544 aa21.96■■□□□ 1.11
DENND3-213ENST00000520571 RAPGEF3O95398 923 aa21.95■■□□□ 1.1
DENND3-213ENST00000520571 PLCH2O75038 1416 aa21.93■■□□□ 1.1
DENND3-213ENST00000520571 AKNAQ7Z591 1439 aa21.93■■□□□ 1.1
DENND3-213ENST00000520571 MYO5CQ9NQX4 1742 aa21.93■■□□□ 1.1
DENND3-213ENST00000520571 AEBP2Q6ZN18 517 aaPredicted RBP21.92■■□□□ 1.1
DENND3-213ENST00000520571 CFAP74Q9C0B2 1584 aa21.91■■□□□ 1.1
DENND3-213ENST00000520571 EFCAB2Q5VUJ9 269 aa21.9■■□□□ 1.1
DENND3-213ENST00000520571 MTUS2Q5JR59 1369 aa21.87■■□□□ 1.09
DENND3-213ENST00000520571 ARHGAP5Q13017 1502 aa21.87■■□□□ 1.09
DENND3-213ENST00000520571 VPS8Q8N3P4 1428 aa21.87■■□□□ 1.09
DENND3-213ENST00000520571 DENND4BO75064 1496 aaPredicted RBP21.86■■□□□ 1.09
DENND3-213ENST00000520571 ADGRL1O94910 1474 aa21.84■■□□□ 1.09
DENND3-213ENST00000520571 SCAPERQ9BY12 1400 aa21.82■■□□□ 1.08
DENND3-213ENST00000520571 CDC42BPBQ9Y5S2 1711 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms