RNA–Protein interactions for RNA: ENST00000520463.1

PCNX2-222, Transcript of pecanex 2, human

TSL 2

Gene PCNX2, Length 766 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCNX2-222	ENST00000520463	GRIN2A	Q12879	1464 aa		13.74	□□□□□ -0.21
PCNX2-222	ENST00000520463	NUP160	Q12769	1436 aa		13.74	□□□□□ -0.21
PCNX2-222	ENST00000520463	CUX1	P39880	1505 aa		13.74	□□□□□ -0.21
PCNX2-222	ENST00000520463	SHROOM2	Q13796	1616 aa		13.73	□□□□□ -0.21
PCNX2-222	ENST00000520463	KDM6B	O15054	1643 aa		13.71	□□□□□ -0.22
PCNX2-222	ENST00000520463	ABCA10	Q8WWZ4	1543 aa		13.69	□□□□□ -0.22
PCNX2-222	ENST00000520463	ABCA5	Q8WWZ7	1642 aa		13.69	□□□□□ -0.22
PCNX2-222	ENST00000520463	NPM1	P06748	294 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
PCNX2-222	ENST00000520463	MAPKBP1	O60336	1514 aa		13.68	□□□□□ -0.22
PCNX2-222	ENST00000520463	DIP2B	Q9P265	1576 aa		13.67	□□□□□ -0.22
PCNX2-222	ENST00000520463	PRG4	Q92954	1404 aa	Predicted RBP	13.64	□□□□□ -0.23
PCNX2-222	ENST00000520463	JPH4	Q96JJ6	628 aa		13.64	□□□□□ -0.23
PCNX2-222	ENST00000520463	FBXO41	Q8TF61	875 aa		13.62	□□□□□ -0.23
PCNX2-222	ENST00000520463	ADAMTS12	P58397	1594 aa		13.62	□□□□□ -0.23
PCNX2-222	ENST00000520463	FHAD1	B1AJZ9	1412 aa		13.61	□□□□□ -0.23
PCNX2-222	ENST00000520463	HECW2	Q9P2P5	1572 aa		13.6	□□□□□ -0.23
PCNX2-222	ENST00000520463	ADGRL1	O94910	1474 aa		13.6	□□□□□ -0.23
PCNX2-222	ENST00000520463	TSPOAP1	O95153	1857 aa		13.59	□□□□□ -0.23
PCNX2-222	ENST00000520463	DMRT2	Q9Y5R5	561 aa		13.58	□□□□□ -0.24
PCNX2-222	ENST00000520463	ADCY10	Q96PN6	1610 aa		13.54	□□□□□ -0.24
PCNX2-222	ENST00000520463	SCAF1	Q9H7N4	1312 aa	Known RBP	13.52	□□□□□ -0.25
PCNX2-222	ENST00000520463	WRN	Q14191	1432 aa	Predicted RBP eCLIP	13.51	□□□□□ -0.25
PCNX2-222	ENST00000520463	ERICH3	Q5RHP9	1530 aa		13.5	□□□□□ -0.25
PCNX2-222	ENST00000520463	PPRC1	Q5VV67	1664 aa	Known RBP	13.45	□□□□□ -0.26
PCNX2-222	ENST00000520463	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.45	□□□□□ -0.26
PCNX2-222	ENST00000520463	GLI2	P10070	1586 aa		13.44	□□□□□ -0.26
PCNX2-222	ENST00000520463	RUSC2	Q8N2Y8	1516 aa		13.44	□□□□□ -0.26
PCNX2-222	ENST00000520463	PLB1	Q6P1J6	1458 aa		13.4	□□□□□ -0.26
PCNX2-222	ENST00000520463	LMTK3	Q96Q04	1460 aa		13.39	□□□□□ -0.27
PCNX2-222	ENST00000520463	ASXL2	Q76L83	1435 aa		13.38	□□□□□ -0.27
PCNX2-222	ENST00000520463	TOP2B	Q02880	1626 aa		13.37	□□□□□ -0.27
PCNX2-222	ENST00000520463	KIAA0586	Q9BVV6	1533 aa		13.37	□□□□□ -0.27
PCNX2-222	ENST00000520463	PTPRG	P23470	1445 aa		13.37	□□□□□ -0.27
PCNX2-222	ENST00000520463	ABCC2	Q92887	1545 aa		13.36	□□□□□ -0.27
PCNX2-222	ENST00000520463	BIVM-ERCC5	R4GMW8	1640 aa		13.35	□□□□□ -0.27
PCNX2-222	ENST00000520463	PPP4R3CP	Q6ZMV5	832 aa		13.34	□□□□□ -0.27
PCNX2-222	ENST00000520463	TEX14	Q8IWB6	1497 aa		13.33	□□□□□ -0.28
PCNX2-222	ENST00000520463	SOCS7	O14512	581 aa		13.32	□□□□□ -0.28
PCNX2-222	ENST00000520463	MAP3K4	Q9Y6R4	1608 aa		13.31	□□□□□ -0.28
PCNX2-222	ENST00000520463	EPRS	P07814	1512 aa	Known RBP	13.3	□□□□□ -0.28
PCNX2-222	ENST00000520463	UHRF1BP1L	A0JNW5	1464 aa		13.29	□□□□□ -0.28
PCNX2-222	ENST00000520463	TNIK	Q9UKE5	1360 aa		13.29	□□□□□ -0.28
PCNX2-222	ENST00000520463	ILDR2	Q71H61	639 aa		13.27	□□□□□ -0.29
PCNX2-222	ENST00000520463	CUL7	Q14999	1698 aa		13.25	□□□□□ -0.29
PCNX2-222	ENST00000520463	CARMIL2	Q6F5E8	1435 aa		13.24	□□□□□ -0.29
PCNX2-222	ENST00000520463	UACA	Q9BZF9	1416 aa		13.24	□□□□□ -0.29
PCNX2-222	ENST00000520463	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.24	□□□□□ -0.29
PCNX2-222	ENST00000520463	KDM5B	Q9UGL1	1544 aa		13.23	□□□□□ -0.29
PCNX2-222	ENST00000520463	IGF1R	P08069	1367 aa		13.22	□□□□□ -0.29
PCNX2-222	ENST00000520463	PTPRM	P28827	1452 aa		13.19	□□□□□ -0.3
PCNX2-222	ENST00000520463	DISP3	Q9P2K9	1392 aa		13.19	□□□□□ -0.3
PCNX2-222	ENST00000520463	MAGI3	Q5TCQ9	1506 aa		13.18	□□□□□ -0.3
PCNX2-222	ENST00000520463	CERK	Q8TCT0	537 aa		13.16	□□□□□ -0.3
PCNX2-222	ENST00000520463	KIF21B	O75037	1637 aa		13.16	□□□□□ -0.3
PCNX2-222	ENST00000520463	ADAMTSL3	P82987	1691 aa		13.15	□□□□□ -0.3
PCNX2-222	ENST00000520463	PCF11	O94913	1555 aa	Known RBP	13.15	□□□□□ -0.3
PCNX2-222	ENST00000520463	CD109	Q6YHK3	1445 aa		13.14	□□□□□ -0.31
PCNX2-222	ENST00000520463	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.14	□□□□□ -0.31
PCNX2-222	ENST00000520463	WDR7	Q9Y4E6	1490 aa		13.13	□□□□□ -0.31
PCNX2-222	ENST00000520463	DISP1	Q96F81	1524 aa		13.12	□□□□□ -0.31
PCNX2-222	ENST00000520463	CFAP43	Q8NDM7	1665 aa		13.11	□□□□□ -0.31
PCNX2-222	ENST00000520463	ARAP3	Q8WWN8	1544 aa		13.1	□□□□□ -0.31
PCNX2-222	ENST00000520463	KIF27	Q86VH2	1401 aa		13.1	□□□□□ -0.31
PCNX2-222	ENST00000520463	CARMIL1	Q5VZK9	1371 aa		13.09	□□□□□ -0.31
PCNX2-222	ENST00000520463	IQGAP2	Q13576	1575 aa		13.09	□□□□□ -0.31
PCNX2-222	ENST00000520463	DCAF8L1	A6NGE4	600 aa		13.07	□□□□□ -0.32
PCNX2-222	ENST00000520463	HOXD11	P31277	338 aa	Predicted RBP	13.06	□□□□□ -0.32
PCNX2-222	ENST00000520463	CNKSR2	Q8WXI2	1034 aa		13.06	□□□□□ -0.32
PCNX2-222	ENST00000520463	KCNH8	Q96L42	1107 aa		13.06	□□□□□ -0.32
PCNX2-222	ENST00000520463	HSPA2	P54652	639 aa		13.05	□□□□□ -0.32
PCNX2-222	ENST00000520463	BCORL1	Q5H9F3	1711 aa		13.04	□□□□□ -0.32
PCNX2-222	ENST00000520463	PHLDB1	Q86UU1	1377 aa		13.04	□□□□□ -0.32
PCNX2-222	ENST00000520463	UGGT2	Q9NYU1	1516 aa		13.03	□□□□□ -0.32
PCNX2-222	ENST00000520463	MADD	Q8WXG6	1647 aa		13.02	□□□□□ -0.33
PCNX2-222	ENST00000520463	ARID4B	Q4LE39	1312 aa	Predicted RBP	12.99	□□□□□ -0.33
PCNX2-222	ENST00000520463	KIAA0556	O60303	1618 aa		12.99	□□□□□ -0.33
PCNX2-222	ENST00000520463	SPATA31D1	Q6ZQQ2	1576 aa		12.98	□□□□□ -0.33
PCNX2-222	ENST00000520463	RAPGEF3	O95398	923 aa		12.98	□□□□□ -0.33
PCNX2-222	ENST00000520463	SUPT5H	O00267	1087 aa	Known RBP	12.96	□□□□□ -0.33
PCNX2-222	ENST00000520463	RIMS1	Q86UR5	1692 aa	Known RBP	12.94	□□□□□ -0.34
PCNX2-222	ENST00000520463	RNF216	Q9NWF9	866 aa	Predicted RBP	12.94	□□□□□ -0.34
PCNX2-222	ENST00000520463	ABCA8	O94911	1581 aa		12.94	□□□□□ -0.34
PCNX2-222	ENST00000520463	NEO1	Q92859	1461 aa		12.91	□□□□□ -0.34
PCNX2-222	ENST00000520463	YEATS2	Q9ULM3	1422 aa		12.89	□□□□□ -0.35
PCNX2-222	ENST00000520463	ABCA9	Q8IUA7	1624 aa		12.89	□□□□□ -0.35
PCNX2-222	ENST00000520463	RAPGEF2	Q9Y4G8	1499 aa		12.88	□□□□□ -0.35
PCNX2-222	ENST00000520463	FRMPD1	Q5SYB0	1578 aa		12.88	□□□□□ -0.35
PCNX2-222	ENST00000520463	POGZ	Q7Z3K3	1410 aa		12.88	□□□□□ -0.35
PCNX2-222	ENST00000520463	GOLGA3	Q08378	1498 aa		12.86	□□□□□ -0.35
PCNX2-222	ENST00000520463	CACNB1	Q02641	598 aa	Predicted RBP	12.86	□□□□□ -0.35
PCNX2-222	ENST00000520463	ATP10B	O94823	1461 aa		12.85	□□□□□ -0.35
PCNX2-222	ENST00000520463	ARHGEF40	Q8TER5	1519 aa		12.84	□□□□□ -0.35
PCNX2-222	ENST00000520463	STRC	Q7RTU9	1775 aa		12.83	□□□□□ -0.36
PCNX2-222	ENST00000520463	FANCA	O15360	1455 aa		12.83	□□□□□ -0.36
PCNX2-222	ENST00000520463	FHOD3	Q2V2M9	1422 aa		12.82	□□□□□ -0.36
PCNX2-222	ENST00000520463	SETD1B	Q9UPS6	1966 aa	Known RBP	12.82	□□□□□ -0.36
PCNX2-222	ENST00000520463	TTC37	Q6PGP7	1564 aa		12.81	□□□□□ -0.36
PCNX2-222	ENST00000520463	AKNA	Q7Z591	1439 aa		12.81	□□□□□ -0.36
PCNX2-222	ENST00000520463	DENND4B	O75064	1496 aa	Predicted RBP	12.81	□□□□□ -0.36
PCNX2-222	ENST00000520463	IQSEC2	Q5JU85	1478 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms