RNA–Protein interactions for RNA: ENST00000519998.1

CNOT7-207, Transcript of CCR4-NOT transcription complex subunit 7, humanhuman

TSL 2

Gene CNOT7, Length 1,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT7-207ENST00000519998 ABCA5Q8WWZ7 1642 aa13.44□□□□□ -0.26
CNOT7-207ENST00000519998 AQRO60306 1485 aaKnown RBP eCLIP13.44□□□□□ -0.26
CNOT7-207ENST00000519998 WDR62O43379 1518 aa13.43□□□□□ -0.26
CNOT7-207ENST00000519998 CUL7Q14999 1698 aa13.41□□□□□ -0.26
CNOT7-207ENST00000519998 IFT140Q96RY7 1462 aa13.4□□□□□ -0.26
CNOT7-207ENST00000519998 P3H3Q8IVL6 736 aa13.39□□□□□ -0.27
CNOT7-207ENST00000519998 ZNF608Q9ULD9 1512 aaPredicted RBP13.38□□□□□ -0.27
CNOT7-207ENST00000519998 KANK4Q5T7N3 995 aaPredicted RBP13.35□□□□□ -0.27
CNOT7-207ENST00000519998 GRIN2BQ13224 1484 aa13.35□□□□□ -0.27
CNOT7-207ENST00000519998 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
CNOT7-207ENST00000519998 FHAD1B1AJZ9 1412 aa13.34□□□□□ -0.27
CNOT7-207ENST00000519998 FHOD3Q2V2M9 1422 aa13.32□□□□□ -0.28
CNOT7-207ENST00000519998 ATP1B4Q9UN42 357 aaPredicted RBP13.28□□□□□ -0.28
CNOT7-207ENST00000519998 ADAMTS12P58397 1594 aa13.28□□□□□ -0.28
CNOT7-207ENST00000519998 PBRM1Q86U86 1689 aa13.27□□□□□ -0.28
CNOT7-207ENST00000519998 SNAPC4Q5SXM2 1469 aa13.27□□□□□ -0.29
CNOT7-207ENST00000519998 EFCAB5A4FU69 1503 aa13.26□□□□□ -0.29
CNOT7-207ENST00000519998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
CNOT7-207ENST00000519998 EIF4G3O43432 1585 aaKnown RBP13.25□□□□□ -0.29
CNOT7-207ENST00000519998 CTTNBP2Q8WZ74 1663 aa13.24□□□□□ -0.29
CNOT7-207ENST00000519998 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
CNOT7-207ENST00000519998 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
CNOT7-207ENST00000519998 ZEB1P37275 1124 aaPredicted RBP13.21□□□□□ -0.29
CNOT7-207ENST00000519998 CHMP7Q8WUX9 453 aaPredicted RBP13.21□□□□□ -0.29
CNOT7-207ENST00000519998 FBLN2P98095 1184 aa13.21□□□□□ -0.3
CNOT7-207ENST00000519998 PCF11O94913 1555 aaKnown RBP13.21□□□□□ -0.3
CNOT7-207ENST00000519998 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
CNOT7-207ENST00000519998 CASKIN1Q8WXD9 1431 aa13.2□□□□□ -0.3
CNOT7-207ENST00000519998 CCER1Q8TC90 406 aaPredicted RBP13.19□□□□□ -0.3
CNOT7-207ENST00000519998 TIAM1Q13009 1591 aa13.19□□□□□ -0.3
CNOT7-207ENST00000519998 SAMD9Q5K651 1589 aa13.19□□□□□ -0.3
CNOT7-207ENST00000519998 GRIN2AQ12879 1464 aa13.19□□□□□ -0.3
CNOT7-207ENST00000519998 MAGI1Q96QZ7 1491 aaPredicted RBP13.19□□□□□ -0.3
CNOT7-207ENST00000519998 MAP3K1Q13233 1512 aa13.19□□□□□ -0.3
CNOT7-207ENST00000519998 IQGAP2Q13576 1575 aa13.17□□□□□ -0.3
CNOT7-207ENST00000519998 FYCO1Q9BQS8 1478 aa13.17□□□□□ -0.3
CNOT7-207ENST00000519998 LRRC9Q6ZRR7 1453 aa13.17□□□□□ -0.3
CNOT7-207ENST00000519998 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
CNOT7-207ENST00000519998 KIAA0586Q9BVV6 1533 aa13.16□□□□□ -0.3
CNOT7-207ENST00000519998 ADRA2BP18089 450 aa13.14□□□□□ -0.31
CNOT7-207ENST00000519998 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
CNOT7-207ENST00000519998 CCNB3Q8WWL7 1395 aa13.12□□□□□ -0.31
CNOT7-207ENST00000519998 UGGT2Q9NYU1 1516 aa13.11□□□□□ -0.31
CNOT7-207ENST00000519998 PHLDB1Q86UU1 1377 aa13.11□□□□□ -0.31
CNOT7-207ENST00000519998 CEP170Q5SW79 1584 aa13.09□□□□□ -0.31
CNOT7-207ENST00000519998 DISP1Q96F81 1524 aa13.09□□□□□ -0.31
CNOT7-207ENST00000519998 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.32
CNOT7-207ENST00000519998 ITGAEP38570 1179 aa13.08□□□□□ -0.32
CNOT7-207ENST00000519998 NUP160Q12769 1436 aa13.08□□□□□ -0.32
CNOT7-207ENST00000519998 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
CNOT7-207ENST00000519998 MTUS2Q5JR59 1369 aa13.07□□□□□ -0.32
CNOT7-207ENST00000519998 JPH4Q96JJ6 628 aa13.06□□□□□ -0.32
CNOT7-207ENST00000519998 CACNB1Q02641 598 aaPredicted RBP13.05□□□□□ -0.32
CNOT7-207ENST00000519998 FAM50AQ14320 339 aaKnown RBP13.05□□□□□ -0.32
CNOT7-207ENST00000519998 KIAA0556O60303 1618 aa13.04□□□□□ -0.32
CNOT7-207ENST00000519998 CCDC18Q5T9S5 1454 aa13.01□□□□□ -0.33
CNOT7-207ENST00000519998 EPRSP07814 1512 aaKnown RBP13.01□□□□□ -0.33
CNOT7-207ENST00000519998 HECW1Q76N89 1606 aa13□□□□□ -0.33
CNOT7-207ENST00000519998 CARMIL2Q6F5E8 1435 aa13□□□□□ -0.33
CNOT7-207ENST00000519998 CDK13Q14004 1512 aaKnown RBP12.99□□□□□ -0.33
CNOT7-207ENST00000519998 NCOA2Q15596 1464 aa12.99□□□□□ -0.33
CNOT7-207ENST00000519998 MAGI3Q5TCQ9 1506 aa12.98□□□□□ -0.33
CNOT7-207ENST00000519998 LRRIQ1Q96JM4 1722 aa12.98□□□□□ -0.33
CNOT7-207ENST00000519998 EHBP1L1Q8N3D4 1523 aa12.97□□□□□ -0.33
CNOT7-207ENST00000519998 FGD6Q6ZV73 1430 aa12.97□□□□□ -0.33
CNOT7-207ENST00000519998 NUP153P49790 1475 aaKnown RBP12.96□□□□□ -0.33
CNOT7-207ENST00000519998 PLB1Q6P1J6 1458 aa12.95□□□□□ -0.34
CNOT7-207ENST00000519998 PRG4Q92954 1404 aaPredicted RBP12.94□□□□□ -0.34
CNOT7-207ENST00000519998 MYOM3Q5VTT5 1437 aa12.94□□□□□ -0.34
CNOT7-207ENST00000519998 DHX57Q6P158 1386 aaKnown RBP12.93□□□□□ -0.34
CNOT7-207ENST00000519998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.93□□□□□ -0.34
CNOT7-207ENST00000519998 RAPGEF6Q8TEU7 1601 aa12.92□□□□□ -0.34
CNOT7-207ENST00000519998 RAB3GAP2Q9H2M9 1393 aa12.92□□□□□ -0.34
CNOT7-207ENST00000519998 ARHGEF11O15085 1522 aa12.91□□□□□ -0.34
CNOT7-207ENST00000519998 CDK11AQ9UQ88 783 aaPredicted RBP12.9□□□□□ -0.34
CNOT7-207ENST00000519998 SETD5Q9C0A6 1442 aa12.9□□□□□ -0.34
CNOT7-207ENST00000519998 SUPT6HQ7KZ85 1726 aaKnown RBP12.9□□□□□ -0.34
CNOT7-207ENST00000519998 CHD1O14646 1710 aa12.89□□□□□ -0.35
CNOT7-207ENST00000519998 PTPRGP23470 1445 aa12.88□□□□□ -0.35
CNOT7-207ENST00000519998 PTPRKQ15262 1439 aa12.87□□□□□ -0.35
CNOT7-207ENST00000519998 CLSPNQ9HAW4 1339 aa12.84□□□□□ -0.35
CNOT7-207ENST00000519998 TROQ12816 1431 aaPredicted RBP12.84□□□□□ -0.35
CNOT7-207ENST00000519998 ABCA8O94911 1581 aa12.84□□□□□ -0.35
CNOT7-207ENST00000519998 MIA2Q96PC5 1412 aa12.83□□□□□ -0.36
CNOT7-207ENST00000519998 ATP10BO94823 1461 aa12.82□□□□□ -0.36
CNOT7-207ENST00000519998 TCOF1Q13428 1488 aaKnown RBP12.82□□□□□ -0.36
CNOT7-207ENST00000519998 PLEKHD1A6NEE1 506 aa12.82□□□□□ -0.36
CNOT7-207ENST00000519998 PTPN23Q9H3S7 1636 aa12.82□□□□□ -0.36
CNOT7-207ENST00000519998 CHIC2Q9UKJ5 165 aa12.82□□□□□ -0.36
CNOT7-207ENST00000519998 ZNF644Q9H582 1327 aaPredicted RBP12.8□□□□□ -0.36
CNOT7-207ENST00000519998 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
CNOT7-207ENST00000519998 SHROOM2Q13796 1616 aa12.8□□□□□ -0.36
CNOT7-207ENST00000519998 RRP7BPQ9NSQ0 103 aa12.79□□□□□ -0.36
CNOT7-207ENST00000519998 UACAQ9BZF9 1416 aa12.79□□□□□ -0.36
CNOT7-207ENST00000519998 CFDP1Q9UEE9 299 aaPredicted RBP12.78□□□□□ -0.36
CNOT7-207ENST00000519998 HFM1A2PYH4 1435 aa12.78□□□□□ -0.36
CNOT7-207ENST00000519998 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
CNOT7-207ENST00000519998 NAIPQ13075 1403 aa12.77□□□□□ -0.37
CNOT7-207ENST00000519998 ZNF777Q9ULD5 760 aaPredicted RBP12.76□□□□□ -0.37
CNOT7-207ENST00000519998 GPATCH8Q9UKJ3 1502 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms