RNA–Protein interactions for RNA: ENST00000519788.6

SCUBE2-206, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5

Gene SCUBE2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-206ENST00000519788 RIMBP3BA6NNM3 1639 aa13.47□□□□□ -0.25
SCUBE2-206ENST00000519788 RIMBP3Q9UFD9 1639 aa13.47□□□□□ -0.25
SCUBE2-206ENST00000519788 CLASP1Q7Z460 1538 aa13.47□□□□□ -0.25
SCUBE2-206ENST00000519788 ARHGEF11O15085 1522 aa13.45□□□□□ -0.26
SCUBE2-206ENST00000519788 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
SCUBE2-206ENST00000519788 CEP170Q5SW79 1584 aa13.44□□□□□ -0.26
SCUBE2-206ENST00000519788 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
SCUBE2-206ENST00000519788 CUL7Q14999 1698 aa13.42□□□□□ -0.26
SCUBE2-206ENST00000519788 NUP160Q12769 1436 aa13.41□□□□□ -0.26
SCUBE2-206ENST00000519788 CARMIL1Q5VZK9 1371 aa13.38□□□□□ -0.27
SCUBE2-206ENST00000519788 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
SCUBE2-206ENST00000519788 CYB5RLQ6IPT4 315 aa13.35□□□□□ -0.27
SCUBE2-206ENST00000519788 ARAP1Q96P48 1450 aa13.35□□□□□ -0.27
SCUBE2-206ENST00000519788 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
SCUBE2-206ENST00000519788 SHROOM2Q13796 1616 aa13.32□□□□□ -0.28
SCUBE2-206ENST00000519788 JPH4Q96JJ6 628 aa13.3□□□□□ -0.28
SCUBE2-206ENST00000519788 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
SCUBE2-206ENST00000519788 KIAA0586Q9BVV6 1533 aa13.29□□□□□ -0.28
SCUBE2-206ENST00000519788 PRG4Q92954 1404 aaPredicted RBP13.28□□□□□ -0.28
SCUBE2-206ENST00000519788 FAM9AQ8IZU1 332 aaPredicted RBP13.26□□□□□ -0.29
SCUBE2-206ENST00000519788 PRXQ9BXM0 1461 aa13.24□□□□□ -0.29
SCUBE2-206ENST00000519788 IQGAP2Q13576 1575 aa13.23□□□□□ -0.29
SCUBE2-206ENST00000519788 EEA1Q15075 1411 aa13.22□□□□□ -0.29
SCUBE2-206ENST00000519788 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
SCUBE2-206ENST00000519788 CTTNBP2Q8WZ74 1663 aa13.19□□□□□ -0.3
SCUBE2-206ENST00000519788 TTBK1Q5TCY1 1321 aaPredicted RBP13.14□□□□□ -0.31
SCUBE2-206ENST00000519788 CARMIL2Q6F5E8 1435 aa13.14□□□□□ -0.31
SCUBE2-206ENST00000519788 DISP1Q96F81 1524 aa13.14□□□□□ -0.31
SCUBE2-206ENST00000519788 UGGT2Q9NYU1 1516 aa13.14□□□□□ -0.31
SCUBE2-206ENST00000519788 KIF21BO75037 1637 aa13.11□□□□□ -0.31
SCUBE2-206ENST00000519788 PTPRGP23470 1445 aa13.11□□□□□ -0.31
SCUBE2-206ENST00000519788 TNIKQ9UKE5 1360 aa13.1□□□□□ -0.31
SCUBE2-206ENST00000519788 KIAA0556O60303 1618 aa13.1□□□□□ -0.31
SCUBE2-206ENST00000519788 ADCY10Q96PN6 1610 aa13.09□□□□□ -0.31
SCUBE2-206ENST00000519788 TRHP20396 242 aaPredicted RBP13.08□□□□□ -0.32
SCUBE2-206ENST00000519788 GOLGA3Q08378 1498 aa13.06□□□□□ -0.32
SCUBE2-206ENST00000519788 RANGAP1P46060 587 aaPredicted RBP13.06□□□□□ -0.32
SCUBE2-206ENST00000519788 P3H3Q8IVL6 736 aa13.04□□□□□ -0.32
SCUBE2-206ENST00000519788 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCUBE2-206ENST00000519788 UBTFP17480 764 aaKnown RBP13.03□□□□□ -0.32
SCUBE2-206ENST00000519788 UACAQ9BZF9 1416 aa13.02□□□□□ -0.33
SCUBE2-206ENST00000519788 SAMD9Q5K651 1589 aa13.01□□□□□ -0.33
SCUBE2-206ENST00000519788 UHRF1BP1LA0JNW5 1464 aa12.99□□□□□ -0.33
SCUBE2-206ENST00000519788 ABCC2Q92887 1545 aa12.98□□□□□ -0.33
SCUBE2-206ENST00000519788 PLB1Q6P1J6 1458 aa12.98□□□□□ -0.33
SCUBE2-206ENST00000519788 CNKSR2Q8WXI2 1034 aa12.98□□□□□ -0.33
SCUBE2-206ENST00000519788 ZBTB22O15209 634 aa12.97□□□□□ -0.33
SCUBE2-206ENST00000519788 MAPKBP1O60336 1514 aa12.97□□□□□ -0.33
SCUBE2-206ENST00000519788 ABCA8O94911 1581 aa12.96□□□□□ -0.33
SCUBE2-206ENST00000519788 FHOD3Q2V2M9 1422 aa12.95□□□□□ -0.34
SCUBE2-206ENST00000519788 KIF13AQ9H1H9 1805 aa12.95□□□□□ -0.34
SCUBE2-206ENST00000519788 ZCCHC11Q5TAX3 1644 aaKnown RBP12.94□□□□□ -0.34
SCUBE2-206ENST00000519788 EFCAB5A4FU69 1503 aa12.93□□□□□ -0.34
SCUBE2-206ENST00000519788 KDM5BQ9UGL1 1544 aa12.93□□□□□ -0.34
SCUBE2-206ENST00000519788 FAM69CQ0P6D2 419 aa12.92□□□□□ -0.34
SCUBE2-206ENST00000519788 ASXL2Q76L83 1435 aa12.92□□□□□ -0.34
SCUBE2-206ENST00000519788 ABCC10Q5T3U5 1492 aa12.91□□□□□ -0.34
SCUBE2-206ENST00000519788 ARID3CA6NKF2 412 aa12.91□□□□□ -0.34
SCUBE2-206ENST00000519788 DIP2BQ9P265 1576 aa12.9□□□□□ -0.34
SCUBE2-206ENST00000519788 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
SCUBE2-206ENST00000519788 RAPGEF6Q8TEU7 1601 aa12.89□□□□□ -0.35
SCUBE2-206ENST00000519788 ARHGAP35Q9NRY4 1499 aa12.89□□□□□ -0.35
SCUBE2-206ENST00000519788 ATP10BO94823 1461 aa12.86□□□□□ -0.35
SCUBE2-206ENST00000519788 NUP153P49790 1475 aaKnown RBP12.85□□□□□ -0.35
SCUBE2-206ENST00000519788 LOC105371045A0A1W2PR82 267 aa12.84□□□□□ -0.35
SCUBE2-206ENST00000519788 TSPOAP1O95153 1857 aa12.84□□□□□ -0.35
SCUBE2-206ENST00000519788 WDR7Q9Y4E6 1490 aa12.84□□□□□ -0.35
SCUBE2-206ENST00000519788 EPRSP07814 1512 aaKnown RBP12.83□□□□□ -0.35
SCUBE2-206ENST00000519788 KCNH8Q96L42 1107 aa12.83□□□□□ -0.36
SCUBE2-206ENST00000519788 GLI2P10070 1586 aa12.82□□□□□ -0.36
SCUBE2-206ENST00000519788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
SCUBE2-206ENST00000519788 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
SCUBE2-206ENST00000519788 FMN1Q68DA7 1419 aa12.81□□□□□ -0.36
SCUBE2-206ENST00000519788 CLIP1P30622 1438 aa12.8□□□□□ -0.36
SCUBE2-206ENST00000519788 ATP1B4Q9UN42 357 aaPredicted RBP12.8□□□□□ -0.36
SCUBE2-206ENST00000519788 MAP3K4Q9Y6R4 1608 aa12.78□□□□□ -0.36
SCUBE2-206ENST00000519788 CDK13Q14004 1512 aaKnown RBP12.78□□□□□ -0.36
SCUBE2-206ENST00000519788 PPRC1Q5VV67 1664 aaKnown RBP12.77□□□□□ -0.36
SCUBE2-206ENST00000519788 HECW1Q76N89 1606 aa12.77□□□□□ -0.37
SCUBE2-206ENST00000519788 CEP162Q5TB80 1403 aa12.76□□□□□ -0.37
SCUBE2-206ENST00000519788 LRRIQ1Q96JM4 1722 aa12.75□□□□□ -0.37
SCUBE2-206ENST00000519788 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
SCUBE2-206ENST00000519788 PLEKHD1A6NEE1 506 aa12.74□□□□□ -0.37
SCUBE2-206ENST00000519788 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
SCUBE2-206ENST00000519788 CD109Q6YHK3 1445 aa12.73□□□□□ -0.37
SCUBE2-206ENST00000519788 CASKIN1Q8WXD9 1431 aa12.72□□□□□ -0.37
SCUBE2-206ENST00000519788 KDM6BO15054 1643 aa12.7□□□□□ -0.38
SCUBE2-206ENST00000519788 ABCA9Q8IUA7 1624 aa12.7□□□□□ -0.38
SCUBE2-206ENST00000519788 MAPK8IP2Q13387 824 aaPredicted RBP12.7□□□□□ -0.38
SCUBE2-206ENST00000519788 TEX14Q8IWB6 1497 aa12.7□□□□□ -0.38
SCUBE2-206ENST00000519788 MSH5O43196 834 aa12.69□□□□□ -0.38
SCUBE2-206ENST00000519788 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
SCUBE2-206ENST00000519788 FYCO1Q9BQS8 1478 aa12.69□□□□□ -0.38
SCUBE2-206ENST00000519788 MAGI3Q5TCQ9 1506 aa12.68□□□□□ -0.38
SCUBE2-206ENST00000519788 CDK11AQ9UQ88 783 aaPredicted RBP12.67□□□□□ -0.38
SCUBE2-206ENST00000519788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.67□□□□□ -0.38
SCUBE2-206ENST00000519788 COL17A1Q9UMD9 1497 aaPredicted RBP12.66□□□□□ -0.38
SCUBE2-206ENST00000519788 CCDC18Q5T9S5 1454 aa12.65□□□□□ -0.38
SCUBE2-206ENST00000519788 TTC37Q6PGP7 1564 aa12.65□□□□□ -0.38
SCUBE2-206ENST00000519788 KIF14Q15058 1648 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms