RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 ARHGEF11O15085 1522 aa19.8■□□□□ 0.76
HPS4-218ENST00000519774 EEA1Q15075 1411 aa19.79■□□□□ 0.76
HPS4-218ENST00000519774 FAM9AQ8IZU1 332 aaPredicted RBP19.79■□□□□ 0.76
HPS4-218ENST00000519774 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
HPS4-218ENST00000519774 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
HPS4-218ENST00000519774 PRXQ9BXM0 1461 aa19.73■□□□□ 0.75
HPS4-218ENST00000519774 FOXD1Q16676 465 aa19.73■□□□□ 0.75
HPS4-218ENST00000519774 SHROOM2Q13796 1616 aa19.72■□□□□ 0.75
HPS4-218ENST00000519774 KIAA0586Q9BVV6 1533 aa19.71■□□□□ 0.75
HPS4-218ENST00000519774 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
HPS4-218ENST00000519774 ARAP1Q96P48 1450 aa19.66■□□□□ 0.74
HPS4-218ENST00000519774 IQGAP2Q13576 1575 aa19.66■□□□□ 0.74
HPS4-218ENST00000519774 CTTNBP2Q8WZ74 1663 aa19.65■□□□□ 0.74
HPS4-218ENST00000519774 JPH4Q96JJ6 628 aa19.64■□□□□ 0.73
HPS4-218ENST00000519774 PRG4Q92954 1404 aaPredicted RBP19.64■□□□□ 0.73
HPS4-218ENST00000519774 KIF21BO75037 1637 aa19.62■□□□□ 0.73
HPS4-218ENST00000519774 CYB5RLQ6IPT4 315 aa19.59■□□□□ 0.73
HPS4-218ENST00000519774 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
HPS4-218ENST00000519774 UGGT2Q9NYU1 1516 aa19.52■□□□□ 0.72
HPS4-218ENST00000519774 GOLGA3Q08378 1498 aa19.51■□□□□ 0.71
HPS4-218ENST00000519774 CARMIL2Q6F5E8 1435 aa19.5■□□□□ 0.71
HPS4-218ENST00000519774 DISP1Q96F81 1524 aa19.48■□□□□ 0.71
HPS4-218ENST00000519774 KIAA0556O60303 1618 aa19.47■□□□□ 0.71
HPS4-218ENST00000519774 TTBK1Q5TCY1 1321 aaPredicted RBP19.45■□□□□ 0.7
HPS4-218ENST00000519774 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
HPS4-218ENST00000519774 TNIKQ9UKE5 1360 aa19.42■□□□□ 0.7
HPS4-218ENST00000519774 RANGAP1P46060 587 aaPredicted RBP19.41■□□□□ 0.7
HPS4-218ENST00000519774 PTPRGP23470 1445 aa19.4■□□□□ 0.7
HPS4-218ENST00000519774 SAMD9Q5K651 1589 aa19.37■□□□□ 0.69
HPS4-218ENST00000519774 ADCY10Q96PN6 1610 aa19.34■□□□□ 0.69
HPS4-218ENST00000519774 P3H3Q8IVL6 736 aa19.34■□□□□ 0.69
HPS4-218ENST00000519774 EFCAB5A4FU69 1503 aa19.3■□□□□ 0.68
HPS4-218ENST00000519774 FHOD3Q2V2M9 1422 aa19.28■□□□□ 0.68
HPS4-218ENST00000519774 UACAQ9BZF9 1416 aa19.28■□□□□ 0.68
HPS4-218ENST00000519774 ABCC2Q92887 1545 aa19.26■□□□□ 0.67
HPS4-218ENST00000519774 PLB1Q6P1J6 1458 aa19.25■□□□□ 0.67
HPS4-218ENST00000519774 UHRF1BP1LA0JNW5 1464 aa19.24■□□□□ 0.67
HPS4-218ENST00000519774 NPM1P06748 294 aaKnown RBP eCLIP19.23■□□□□ 0.67
HPS4-218ENST00000519774 ABCA8O94911 1581 aa19.23■□□□□ 0.67
HPS4-218ENST00000519774 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
HPS4-218ENST00000519774 LOC105371045A0A1W2PR82 267 aa19.18■□□□□ 0.66
HPS4-218ENST00000519774 TRHP20396 242 aaPredicted RBP19.18■□□□□ 0.66
HPS4-218ENST00000519774 RAPGEF6Q8TEU7 1601 aa19.18■□□□□ 0.66
HPS4-218ENST00000519774 ZCCHC11Q5TAX3 1644 aaKnown RBP19.17■□□□□ 0.66
HPS4-218ENST00000519774 CLIP1P30622 1438 aa19.17■□□□□ 0.66
HPS4-218ENST00000519774 MAPKBP1O60336 1514 aa19.16■□□□□ 0.66
HPS4-218ENST00000519774 KDM5BQ9UGL1 1544 aa19.15■□□□□ 0.66
HPS4-218ENST00000519774 ARID3CA6NKF2 412 aa19.12■□□□□ 0.65
HPS4-218ENST00000519774 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
HPS4-218ENST00000519774 FMN1Q68DA7 1419 aa19.1■□□□□ 0.65
HPS4-218ENST00000519774 ASXL2Q76L83 1435 aa19.09■□□□□ 0.65
HPS4-218ENST00000519774 NUP153P49790 1475 aaKnown RBP19.08■□□□□ 0.64
HPS4-218ENST00000519774 KIF13AQ9H1H9 1805 aa19.07■□□□□ 0.64
HPS4-218ENST00000519774 DIP2BQ9P265 1576 aa19.06■□□□□ 0.64
HPS4-218ENST00000519774 HECW1Q76N89 1606 aa19.06■□□□□ 0.64
HPS4-218ENST00000519774 ATP10BO94823 1461 aa19.05■□□□□ 0.64
HPS4-218ENST00000519774 ABCC10Q5T3U5 1492 aa19.05■□□□□ 0.64
HPS4-218ENST00000519774 ATP1B4Q9UN42 357 aaPredicted RBP19.04■□□□□ 0.64
HPS4-218ENST00000519774 PCF11O94913 1555 aaKnown RBP19.03■□□□□ 0.64
HPS4-218ENST00000519774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
HPS4-218ENST00000519774 HNRNPUL2Q1KMD3 747 aaKnown RBP19.03■□□□□ 0.64
HPS4-218ENST00000519774 WDR7Q9Y4E6 1490 aa19.03■□□□□ 0.64
HPS4-218ENST00000519774 FAM69CQ0P6D2 419 aa19.01■□□□□ 0.63
HPS4-218ENST00000519774 CDK13Q14004 1512 aaKnown RBP19■□□□□ 0.63
HPS4-218ENST00000519774 ADRA2BP18089 450 aa18.98■□□□□ 0.63
HPS4-218ENST00000519774 PPP6R1Q9UPN7 881 aa18.98■□□□□ 0.63
HPS4-218ENST00000519774 EPRSP07814 1512 aaKnown RBP18.98■□□□□ 0.63
HPS4-218ENST00000519774 CASKIN1Q8WXD9 1431 aa18.97■□□□□ 0.63
HPS4-218ENST00000519774 LRRIQ1Q96JM4 1722 aa18.96■□□□□ 0.63
HPS4-218ENST00000519774 FYCO1Q9BQS8 1478 aa18.95■□□□□ 0.62
HPS4-218ENST00000519774 GLI2P10070 1586 aa18.94■□□□□ 0.62
HPS4-218ENST00000519774 KCNH8Q96L42 1107 aa18.94■□□□□ 0.62
HPS4-218ENST00000519774 TSPOAP1O95153 1857 aa18.94■□□□□ 0.62
HPS4-218ENST00000519774 CCDC18Q5T9S5 1454 aa18.9■□□□□ 0.62
HPS4-218ENST00000519774 MAP3K4Q9Y6R4 1608 aa18.89■□□□□ 0.62
HPS4-218ENST00000519774 PLEKHD1A6NEE1 506 aa18.89■□□□□ 0.61
HPS4-218ENST00000519774 CFAP43Q8NDM7 1665 aa18.87■□□□□ 0.61
HPS4-218ENST00000519774 VPS8Q8N3P4 1428 aa18.86■□□□□ 0.61
HPS4-218ENST00000519774 PPRC1Q5VV67 1664 aaKnown RBP18.85■□□□□ 0.61
HPS4-218ENST00000519774 CDK11AQ9UQ88 783 aaPredicted RBP18.84■□□□□ 0.61
HPS4-218ENST00000519774 ABCA9Q8IUA7 1624 aa18.84■□□□□ 0.61
HPS4-218ENST00000519774 CD109Q6YHK3 1445 aa18.82■□□□□ 0.6
HPS4-218ENST00000519774 TROQ12816 1431 aaPredicted RBP18.81■□□□□ 0.6
HPS4-218ENST00000519774 TTC37Q6PGP7 1564 aa18.8■□□□□ 0.6
HPS4-218ENST00000519774 MAGI3Q5TCQ9 1506 aa18.79■□□□□ 0.6
HPS4-218ENST00000519774 KIF14Q15058 1648 aa18.79■□□□□ 0.6
HPS4-218ENST00000519774 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
HPS4-218ENST00000519774 TEX14Q8IWB6 1497 aa18.77■□□□□ 0.6
HPS4-218ENST00000519774 KDM6BO15054 1643 aa18.74■□□□□ 0.59
HPS4-218ENST00000519774 TIAM1Q13009 1591 aa18.74■□□□□ 0.59
HPS4-218ENST00000519774 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
HPS4-218ENST00000519774 EHBP1L1Q8N3D4 1523 aa18.71■□□□□ 0.59
HPS4-218ENST00000519774 MYO5CQ9NQX4 1742 aa18.71■□□□□ 0.59
HPS4-218ENST00000519774 CFAP74Q9C0B2 1584 aa18.66■□□□□ 0.58
HPS4-218ENST00000519774 NEO1Q92859 1461 aa18.65■□□□□ 0.58
HPS4-218ENST00000519774 PLCH2O75038 1416 aa18.65■□□□□ 0.58
HPS4-218ENST00000519774 FANCAO15360 1455 aa18.65■□□□□ 0.58
HPS4-218ENST00000519774 MAP3K1Q13233 1512 aa18.64■□□□□ 0.58
HPS4-218ENST00000519774 APLP2Q06481 763 aa18.64■□□□□ 0.57
HPS4-218ENST00000519774 PIAS4Q8N2W9 510 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms