RNA–Protein interactions for RNA: ENST00000519559.1

PCMTD1-203, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 2

Gene PCMTD1, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-203ENST00000519559 SMARCA2P51531 1590 aa13.4□□□□□ -0.26
PCMTD1-203ENST00000519559 THOC2Q8NI27 1593 aaKnown RBP13.35□□□□□ -0.27
PCMTD1-203ENST00000519559 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
PCMTD1-203ENST00000519559 BAZ1BQ9UIG0 1483 aaKnown RBP13.33□□□□□ -0.28
PCMTD1-203ENST00000519559 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
PCMTD1-203ENST00000519559 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
PCMTD1-203ENST00000519559 FARP1Q9Y4F1 1045 aaPredicted RBP13.3□□□□□ -0.28
PCMTD1-203ENST00000519559 C19orf67A6NJJ6 358 aa13.28□□□□□ -0.28
PCMTD1-203ENST00000519559 EVX2Q03828 476 aa13.24□□□□□ -0.29
PCMTD1-203ENST00000519559 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
PCMTD1-203ENST00000519559 HAX1O00165 279 aa13.23□□□□□ -0.29
PCMTD1-203ENST00000519559 SMARCA4P51532 1647 aa13.22□□□□□ -0.29
PCMTD1-203ENST00000519559 MRC2Q9UBG0 1479 aa13.21□□□□□ -0.3
PCMTD1-203ENST00000519559 BAZ1AQ9NRL2 1556 aaPredicted RBP13.2□□□□□ -0.3
PCMTD1-203ENST00000519559 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
PCMTD1-203ENST00000519559 CYB5RLQ6IPT4 315 aa13.16□□□□□ -0.3
PCMTD1-203ENST00000519559 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
PCMTD1-203ENST00000519559 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
PCMTD1-203ENST00000519559 WDR62O43379 1518 aa13.11□□□□□ -0.31
PCMTD1-203ENST00000519559 MIER1Q8N108 512 aa13.09□□□□□ -0.31
PCMTD1-203ENST00000519559 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
PCMTD1-203ENST00000519559 CEP164Q9UPV0 1460 aa13.07□□□□□ -0.32
PCMTD1-203ENST00000519559 NPM1P06748 294 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCMTD1-203ENST00000519559 PEG3Q9GZU2 1588 aa13.06□□□□□ -0.32
PCMTD1-203ENST00000519559 RIMBP3CA6NJZ7 1639 aa13.06□□□□□ -0.32
PCMTD1-203ENST00000519559 RIMBP3BA6NNM3 1639 aa13.06□□□□□ -0.32
PCMTD1-203ENST00000519559 RIMBP3Q9UFD9 1639 aa13.06□□□□□ -0.32
PCMTD1-203ENST00000519559 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
PCMTD1-203ENST00000519559 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
PCMTD1-203ENST00000519559 FANCD2Q9BXW9 1451 aa13□□□□□ -0.33
PCMTD1-203ENST00000519559 ARHGEF11O15085 1522 aa12.99□□□□□ -0.33
PCMTD1-203ENST00000519559 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
PCMTD1-203ENST00000519559 PLEKHG5O94827 1062 aa12.98□□□□□ -0.33
PCMTD1-203ENST00000519559 MROH2BQ7Z745 1585 aa12.95□□□□□ -0.34
PCMTD1-203ENST00000519559 NUBP1P53384 320 aa12.95□□□□□ -0.34
PCMTD1-203ENST00000519559 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
PCMTD1-203ENST00000519559 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
PCMTD1-203ENST00000519559 GABBR2O75899 941 aa12.92□□□□□ -0.34
PCMTD1-203ENST00000519559 RASEFQ8IZ41 740 aa12.92□□□□□ -0.34
PCMTD1-203ENST00000519559 CLCN6P51797 869 aa12.88□□□□□ -0.35
PCMTD1-203ENST00000519559 CCDC61Q9Y6R9 512 aa12.88□□□□□ -0.35
PCMTD1-203ENST00000519559 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
PCMTD1-203ENST00000519559 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
PCMTD1-203ENST00000519559 CFTRP13569 1480 aa12.85□□□□□ -0.35
PCMTD1-203ENST00000519559 URB2Q14146 1524 aaKnown RBP12.85□□□□□ -0.35
PCMTD1-203ENST00000519559 PHF12Q96QT6 1004 aa12.84□□□□□ -0.35
PCMTD1-203ENST00000519559 IFT140Q96RY7 1462 aa12.84□□□□□ -0.35
PCMTD1-203ENST00000519559 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
PCMTD1-203ENST00000519559 ZNF608Q9ULD9 1512 aaPredicted RBP12.8□□□□□ -0.36
PCMTD1-203ENST00000519559 SLC24A1O60721 1099 aa12.8□□□□□ -0.36
PCMTD1-203ENST00000519559 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
PCMTD1-203ENST00000519559 ARAP1Q96P48 1450 aa12.78□□□□□ -0.36
PCMTD1-203ENST00000519559 WIZO95785 1651 aa12.77□□□□□ -0.37
PCMTD1-203ENST00000519559 GALR2O43603 387 aaPredicted RBP12.75□□□□□ -0.37
PCMTD1-203ENST00000519559 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
PCMTD1-203ENST00000519559 KLHL34Q8N239 644 aa12.74□□□□□ -0.37
PCMTD1-203ENST00000519559 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
PCMTD1-203ENST00000519559 CHMP7Q8WUX9 453 aaPredicted RBP12.73□□□□□ -0.37
PCMTD1-203ENST00000519559 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
PCMTD1-203ENST00000519559 ABCC8Q09428 1581 aa12.72□□□□□ -0.37
PCMTD1-203ENST00000519559 SPOCK2Q92563 424 aa12.71□□□□□ -0.37
PCMTD1-203ENST00000519559 MS4A3Q96HJ5 214 aa12.7□□□□□ -0.38
PCMTD1-203ENST00000519559 AQRO60306 1485 aaKnown RBP eCLIP12.7□□□□□ -0.38
PCMTD1-203ENST00000519559 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
PCMTD1-203ENST00000519559 CHD1O14646 1710 aa12.67□□□□□ -0.38
PCMTD1-203ENST00000519559 MAP3K13O43283 966 aa12.66□□□□□ -0.38
PCMTD1-203ENST00000519559 ILDR1Q86SU0 546 aaPredicted RBP12.66□□□□□ -0.38
PCMTD1-203ENST00000519559 TOPBP1Q92547 1522 aa12.66□□□□□ -0.38
PCMTD1-203ENST00000519559 EIF4G3O43432 1585 aaKnown RBP12.65□□□□□ -0.38
PCMTD1-203ENST00000519559 SGIP1Q9BQI5 828 aa12.64□□□□□ -0.39
PCMTD1-203ENST00000519559 GSE1Q14687 1217 aa12.62□□□□□ -0.39
PCMTD1-203ENST00000519559 DCAF8Q5TAQ9 597 aa12.62□□□□□ -0.39
PCMTD1-203ENST00000519559 CHRM1P11229 460 aaPredicted RBP12.59□□□□□ -0.39
PCMTD1-203ENST00000519559 TDRD9Q8NDG6 1382 aaKnown RBP12.58□□□□□ -0.4
PCMTD1-203ENST00000519559 TRPC6Q9Y210 931 aa12.58□□□□□ -0.4
PCMTD1-203ENST00000519559 PRDM2Q13029 1718 aa12.57□□□□□ -0.4
PCMTD1-203ENST00000519559 ASTLQ6HA08 431 aaPredicted RBP12.57□□□□□ -0.4
PCMTD1-203ENST00000519559 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
PCMTD1-203ENST00000519559 SYNJ1O43426 1573 aa12.56□□□□□ -0.4
PCMTD1-203ENST00000519559 IFNL1Q8IU54 200 aa12.55□□□□□ -0.4
PCMTD1-203ENST00000519559 DCBLD2Q96PD2 775 aa12.55□□□□□ -0.4
PCMTD1-203ENST00000519559 DNMBPQ6XZF7 1577 aa12.55□□□□□ -0.4
PCMTD1-203ENST00000519559 SOGA1O94964 1423 aa12.54□□□□□ -0.4
PCMTD1-203ENST00000519559 PYGBP11216 843 aa12.54□□□□□ -0.4
PCMTD1-203ENST00000519559 PCDHB13Q9Y5F0 798 aa12.54□□□□□ -0.4
PCMTD1-203ENST00000519559 GAPVD1Q14C86 1478 aa12.53□□□□□ -0.4
PCMTD1-203ENST00000519559 ATMINO43313 823 aaPredicted RBP12.53□□□□□ -0.4
PCMTD1-203ENST00000519559 TIE1P35590 1138 aa12.51□□□□□ -0.41
PCMTD1-203ENST00000519559 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
PCMTD1-203ENST00000519559 BMP2KQ9NSY1 1161 aaPredicted RBP12.51□□□□□ -0.41
PCMTD1-203ENST00000519559 TARBP1Q13395 1621 aaKnown RBP12.51□□□□□ -0.41
PCMTD1-203ENST00000519559 CCDC88BA6NC98 1476 aa12.5□□□□□ -0.41
PCMTD1-203ENST00000519559 SNAPC4Q5SXM2 1469 aa12.49□□□□□ -0.41
PCMTD1-203ENST00000519559 CLASP1Q7Z460 1538 aa12.48□□□□□ -0.41
PCMTD1-203ENST00000519559 POLA1P09884 1462 aaPredicted RBP12.47□□□□□ -0.41
PCMTD1-203ENST00000519559 MAGI1Q96QZ7 1491 aaPredicted RBP12.47□□□□□ -0.41
PCMTD1-203ENST00000519559 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
PCMTD1-203ENST00000519559 CIZ1Q9ULV3 898 aaPredicted RBP12.47□□□□□ -0.41
PCMTD1-203ENST00000519559 TTLL13PA6NNM8 815 aa12.45□□□□□ -0.42
PCMTD1-203ENST00000519559 ATN1P54259 1190 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms